{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA981359\" and tax_phylum = \"Campylobacterota\"", "rows": [[26646171, "PRJNA981359_S_NODE_10081_length_419_cov_1.531792_g9981_i0", "PRJNA981359", "10081", "419", "1.531792", "6.41820848", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "67.8", "4.75e-12", "", "NR", "GAA9183445.1", "210", "g9981", "i0", "60.6", "0.47255369928401", "66", "26", "47.3", "0", "419", "222", "3", "68", "GAA9183445.1 hypothetical protein Kyoto193A_2760 [Helicobacter pylori]", "diamond", "198", "67.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [26937263, "PRJNA981359_S_NODE_46762_length_287_cov_3.172897_g46662_i0", "PRJNA981359", "46762", "287", "3.172897", "9.10621439", "root", "1", "Root_unresolved", "Root_unresolved", "57.4", "1.28e-7", 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Kyoto154A_0760 [Helicobacter pylori]", "diamond", "249", "100", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [27658367, "PRJNA981359_S_NODE_50284_length_280_cov_1.806763_g50184_i0", "PRJNA981359", "50284", "280", "1.806763", "5.0589364", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "64.7", "2.97e-11", "", "NR", "GAA9176142.1", "210", "g50184", "i0", "69.8", "0.460714285714286", "43", "13", "46.1", "0", "278", "150", "50", "92", "GAA9176142.1 hypothetical protein Kyoto193A_0160 [Helicobacter pylori]", "diamond", "129", "64.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [27910509, "PRJNA981359_S_NODE_71565_length_244_cov_1.000000_g71465_i0", "PRJNA981359", "71565", "244", "1", "2.44", "Helicobacter pylori", "210", "Bacteria", 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"Helicobacter pylori"], [28352718, "PRJNA981359_S_NODE_31006_length_325_cov_0.928571_g30906_i0", "PRJNA981359", "31006", "325", "0.928571", "3.01785575", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "74.7", "1.97e-14", "", "NR", "GAA8857246.1", "210", "g30906", "i0", "54.7", "0.590769230769231", "64", "29", "59.1", "0", "15", "206", "51", "114", "GAA8857246.1 hypothetical protein Kyoto154A_2180 [Helicobacter pylori]", "diamond", "192", "74.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [28637187, "PRJNA981359_S_NODE_807_length_827_cov_1.228117_g747_i0", "PRJNA981359", "807", "827", "1.228117", "10.15652759", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "189", "8.729999999999997e-55", "", "NR", "GAA8906475.1", "210", "g747", "i0", "59.5", "3.99395405078597", "158", "64", "57.3", "0", "822", "349", "147", "304", "GAA8906475.1 hypothetical protein Kyoto166A_0510 [Helicobacter pylori]", "diamond", "3303", "189", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [29016161, "PRJNA981359_S_NODE_37368_length_308_cov_3.944681_g37268_i0", "PRJNA981359", "37368", "308", "3.944681", "12.14961748", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "57.8", "1.01e-8", "", "NR", "GAA9046884.1", "210", "g37268", "i0", "62.5", "0.38961038961039", "40", "13", "39", "1", "265", "146", "22", "59", "GAA9046884.1 hypothetical protein Kyoto184A_03270 [Helicobacter pylori]", "diamond", "120", "57.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [29205472, "PRJNA981359_S_NODE_28829_length_331_cov_0.899225_g28729_i0", "PRJNA981359", "28829", "331", "0.899225", "2.97643475", "Helicobacter pylori", "210", 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"Helicobacter", "Helicobacter pylori"], [29963187, "PRJNA981359_S_NODE_6051_length_475_cov_0.791045_g5952_i0", "PRJNA981359", "6051", "475", "0.791045", "3.75746375", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "62.8", "1.25e-9", "", "NR", "GAA6910794.1", "210", "g5952", "i0", "66.7", "0.265263157894737", "42", "14", "26.5", "0", "8", "133", "51", "92", "GAA6910794.1 hypothetical protein Kyoto207A_2810 [Helicobacter pylori]", "diamond", "126", "62.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30437330, "PRJNA981359_S_NODE_41253_length_299_cov_3.185841_g41153_i0", "PRJNA981359", "41253", "299", "3.185841", "9.52566459", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "57", "1.31e-8", "", "NR", "GAA6806475.1", "210", "g41153", "i0", "80.6", "0.311036789297659", "31", "6", "31.1", "0", "1", "93", "5", "35", "GAA6806475.1 hypothetical protein Kyoto200A_2840 [Helicobacter pylori]", "diamond", "93", "57", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30658216, "PRJNA981359_S_NODE_70133_length_246_cov_0.901734_g70033_i0", "PRJNA981359", "70133", "246", "0.901734", "2.21826564", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "43.9", "0.00276", "", "NR", "GAA9209244.1", "210", "g70033", "i0", "67.9", "0.341463414634146", "28", "9", "34.1", "0", "219", "136", "63", "90", "GAA9209244.1 hypothetical protein Kyoto198A_1610 [Helicobacter pylori]", "diamond", "84", "43.9", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30942744, "PRJNA981359_S_NODE_61274_length_259_cov_0.817204_g61174_i0", "PRJNA981359", "61274", "259", "0.817204", "2.11655836", "Helicobacter pylori", "210", "Bacteria", 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pylori"], [31385254, "PRJNA981359_S_NODE_69456_length_247_cov_0.844828_g69356_i0", "PRJNA981359", "69456", "247", "0.844828", "2.08672516", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "82", "1.95e-17", "", "NR", "GAA9040756.1", "210", "g69356", "i0", "56.9", "0.874493927125506", "72", "31", "87.4", "0", "32", "247", "23", "94", "GAA9040756.1 hypothetical protein Kyoto184A_02080 [Helicobacter pylori]", "diamond", "216", "82", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [31606517, "PRJNA981359_S_NODE_66196_length_251_cov_0.876404_g66096_i0", "PRJNA981359", "66196", "251", "0.876404", "2.19977404", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "55.1", "2.65e-7", "", "NR", "GAA8796835.1", "210", "g66096", "i0", "61.4", "0.525896414342629", "44", "17", "52.6", "0", "139", "8", "70", "113", "GAA8796835.1 hypothetical protein Kyoto149A_1170 [Helicobacter pylori]", "diamond", "132", "55.1", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [31859425, "PRJNA981359_S_NODE_12737_length_398_cov_1.138462_g12637_i0", "PRJNA981359", "12737", "398", "1.138462", "4.53107876", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "67.4", "3.23e-12", "", "NR", "GAA6797768.1", "210", "g12637", "i0", "61.7", "0.35427135678392", "47", "18", "35.4", "0", "302", "162", "1", "47", "GAA6797768.1 hypothetical protein Kyoto200A_1380 [Helicobacter pylori]", "diamond", "141", "67.4", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32144350, "PRJNA981359_S_NODE_56618_length_267_cov_3.082474_g56518_i0", "PRJNA981359", "56618", "267", "3.082474", "8.23020558", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "67.8", "1.26e-12", "", "NR", "GAA8565153.1", "210", "g56518", "i0", "96.4", "0.314606741573034", "28", "1", "31.5", "0", "266", "183", "41", "68", "GAA8565153.1 hypothetical protein oki142_14710 [Helicobacter pylori]", "diamond", "84", "67.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32460848, "PRJNA981359_S_NODE_48479_length_284_cov_1.312796_g48379_i0", "PRJNA981359", "48479", "284", "1.312796", "3.72834064", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "45.1", "0.00195", "", "NR", "GAA8806702.1", "210", "g48379", "i0", "56.4", "0.411971830985915", "39", "17", "41.2", "0", "8", "124", "11", "49", "GAA8806702.1 hypothetical protein Kyoto149A_2640 [Helicobacter pylori]", "diamond", "117", "45.1", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32555963, "PRJNA981359_S_NODE_49659_length_281_cov_2.774038_g49559_i0", "PRJNA981359", "49659", "281", "2.774038", "7.79504678", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "68.6", "6.8e-12", "", "NR", "GAA9039287.1", "210", "g49559", "i0", "43.5", "0.907473309608541", "85", "47", "89.7", "1", "261", "10", "14", "98", "GAA9039287.1 hypothetical protein Kyoto184A_01650 [Helicobacter pylori]", "diamond", "255", "68.6", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32713062, "PRJNA981359_S_NODE_42880_length_296_cov_1.273543_g42780_i0", "PRJNA981359", "42880", "296", "1.273543", "3.76968728", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "77.8", "1.42e-16", "", "NR", "GAA9183445.1", "210", "g42780", "i0", "63.2", "0.689189189189189", "68", "25", "68.9", "0", "285", "82", "1", "68", "GAA9183445.1 hypothetical protein Kyoto193A_2760 [Helicobacter pylori]", "diamond", "204", "77.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"]], "truncated": false, "filtered_table_rows_count": 25, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA981359", "p2": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA981359&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA981359", "label": "PRJNA981359", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA981359&tax_phylum=Campylobacterota", "results": [{"value": "diamond", "label": "diamond", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA981359&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA981359&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA981359&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA981359&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA981359&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA981359&tax_phylum=Campylobacterota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA981359&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA981359", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 198.27530099973956}