{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA951810\" and tax_phylum = \"Chlorobiota\"", "rows": [[17516208, "PRJNA951810_P_NODE_83234_length_299_cov_2.964602_g82890_i0", "PRJNA951810", "83234", "299", "2.964602", "8.86415998", "Bacteria", "2", "Bacteria", "Bacteria", "172", "1.01e-49", "", "NR", "TLU51734.1", "1095", "g82890", "i0", "86.9", "26.819397993311", "99", "13", "99.3", "0", "297", "1", "31", "129", "TLU51734.1 MAG: divalent metal cation transporter [Chlorobium sp.]", "diamond", "8019", "172", "1", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", "Chlorobiia", "Chlorobiales", "Chlorobiaceae", "Chlorobium", "Chlorobium sp."], [26677098, "PRJNA951810_P_NODE_109901_length_287_cov_1.677570_g109557_i0", "PRJNA951810", "109901", "287", "1.67757", "4.8146259", "Chlorobi bacterium NICIL-2", "1662223", "Bacteria", "Bacteria", "60.1", "3.75e-8", "", "NR", "KXB97453.1", "1662223", "g109557", "i0", "43.2", "0.993031358885017", "95", "51", "97.2", "3", "285", "7", "87", "180", "KXB97453.1 MAG: hypothetical protein AA908_06230 [Chlorobi bacterium NICIL-2]", "diamond", "285", "60.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", null, null, null, null, "Chlorobi bacterium NICIL-2"], [27878657, "PRJNA951810_P_NODE_89085_length_298_cov_2.608889_g88741_i0", "PRJNA951810", "89085", "298", "2.608889", "7.77448922", "Chlorobi bacterium NICIL-2", "1662223", "Bacteria", "Bacteria", "199", "2.09e-59", "", "NR", "KXB97596.1", "1662223", "g88741", "i0", "93.3", "1.05704697986577", "105", "1", "99.7", "1", "1", "297", "272", "376", "KXB97596.1 MAG: hypothetical protein AA908_05575 [Chlorobi bacterium NICIL-2]", "diamond", "315", "199", "1", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", null, null, null, null, "Chlorobi bacterium NICIL-2"], [27973267, "PRJNA951810_P_NODE_136605_length_268_cov_3.743590_g136260_i0", "PRJNA951810", "136605", "268", "3.74359", "10.0328212", "Chlorobi bacterium NICIL-2", "1662223", "Bacteria", "Bacteria", "155", "9.2e-42", "", "NR", "KXB97076.1", "1662223", "g136260", "i0", "96.6", "0.985074626865672", "88", "3", "98.5", "0", "267", "4", "188", "275", "KXB97076.1 MAG: hypothetical protein AA908_08490, partial [Chlorobi bacterium NICIL-2]", "diamond", "264", "155", "1", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", null, null, null, null, "Chlorobi bacterium NICIL-2"], [28636637, "PRJNA951810_P_NODE_68947_length_309_cov_2.411017_g68603_i0", "PRJNA951810", "68947", "309", "2.411017", "7.45004253", "Chlorobium ferrooxidans", "84205", "Bacteria", "Bacteria", "81.3", "2.42e-15", "", "NR", "WP_006367293.1", "84205", "g68603", "i0", "78", "2.39805825242718", "50", "11", "48.5", "0", "308", "159", "828", "877", "WP_006367293.1 type I restriction endonuclease subunit R [Chlorobium ferrooxidans]", "diamond", "741", "81.3", "1", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", "Chlorobiia", "Chlorobiales", "Chlorobiaceae", "Chlorobium", "Chlorobium ferrooxidans"], [30373727, "PRJNA951810_P_NODE_76052_length_299_cov_6.141593_g75708_i0", "PRJNA951810", "76052", "299", "6.141593", "18.36336307", "Chlorobaculum tepidum", "1097", "Bacteria", "Bacteria", "122", "1.03e-29", "", "NR", "WP_226986841.1", "1097", "g75708", "i0", "60.6", "0.993311036789298", "99", "39", "99.3", "0", "2", "298", "520", "618", "WP_226986841.1 glycosyltransferase family 87 protein [Chlorobaculum tepidum]", "diamond", "297", "122", "1", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", "Chlorobiia", "Chlorobiales", "Chlorobiaceae", "Chlorobaculum", "Chlorobaculum tepidum"], [31669114, "PRJNA951810_P_NODE_179077_length_233_cov_3.675000_g178732_i0", "PRJNA951810", "179077", "233", "3.675", "8.56275", "Chlorobiaceae bacterium", "2067991", "Bacteria", "Bacteria", "85.1", "3.22e-17", "", "NR", "NTW68872.1", "2067991", "g178732", "i0", "52.7", "1.90557939914163", "74", "35", "95.3", "0", "4", "225", "266", "339", "NTW68872.1 Tol-Pal system beta propeller repeat protein TolB [Chlorobiaceae bacterium]", "diamond", "444", "85.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", "Chlorobiia", "Chlorobiales", "Chlorobiaceae", null, "Chlorobiaceae bacterium"], [31960314, "PRJNA951810_P_NODE_57897_length_310_cov_3.915612_g57554_i0", "PRJNA951810", "57897", "310", "3.915612", "12.1383972", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "82.8", "3.2e-16", "", "NR", "MEI7706697.1", "1095", "g57554", "i0", "72.9", "3.73548387096774", "48", "13", "46.5", "0", "6", "149", "63", "110", "MEI7706697.1 SPFH domain-containing protein [Chlorobium sp.]", "diamond", "1158", "83.2", "0.995192307692308", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", "Chlorobiia", "Chlorobiales", "Chlorobiaceae", "Chlorobium", "Chlorobium sp."], [32023701, "PRJNA951810_P_NODE_64838_length_310_cov_2.869198_g64495_i0", "PRJNA951810", "64838", "310", "2.869198", "8.8945138", "Bacteria", "2", "Bacteria", "Bacteria", "61.2", "1.93e-8", "", "NR", "MDB5034780.1", "2268192", "g64495", "i0", "58.7", "0.832258064516129", "46", "19", "44.5", "0", "303", "166", "75", "120", "MDB5034780.1 AraC family transcriptional regulator [Chlorobiota bacterium]", "diamond", "258", "61.2", "1", "Bacteria", "FCB group", "Pseudomonadati", "Chlorobiota", null, null, null, null, "Chlorobiota bacterium"]], "truncated": false, "filtered_table_rows_count": 9, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA951810", "p2": "Chlorobiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA951810&tax_phylum=Chlorobiota", "results": [{"value": "PRJNA951810", "label": "PRJNA951810", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Chlorobiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA951810&tax_phylum=Chlorobiota", "results": [{"value": "diamond", "label": "diamond", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA951810&tax_phylum=Chlorobiota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA951810&tax_phylum=Chlorobiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA951810&tax_phylum=Chlorobiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA951810&tax_phylum=Chlorobiota", "results": [{"value": "FCB group", "label": "FCB group", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA951810&tax_phylum=Chlorobiota&tax_clade=FCB+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA951810&tax_phylum=Chlorobiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA951810&tax_phylum=Chlorobiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA951810&tax_phylum=Chlorobiota", "results": [{"value": "Chlorobiota", "label": "Chlorobiota", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA951810", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 172.24883299786597}