{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA940501\" and tax_kingdom = \"Methanobacteriati\"", "rows": [[10187303, "PRJNA940501_S_NODE_98208_length_239_cov_1.724490_g97390_i0", "PRJNA940501", "98208", "239", "1.72449", "4.1215311", "root", "1", "Root_unresolved", "Root_unresolved", "99.4", "4.16e-22", "", "NR", "WP_015300700.1", "387341", "g97390", "i0", "79", "7.07949790794979", "62", "13", "77.8", "0", "50", "235", "574", "635", "WP_015300700.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Halovivax ruber]", "diamond", "1692", "100", "0.994", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Natrialbaceae", "Halovivax", "Halovivax ruber"], [27436286, "PRJNA940501_S_NODE_65823_length_266_cov_1.264574_g65005_i0", "PRJNA940501", "65823", "266", "1.264574", "3.36376684", "Methanosphaera sp. rholeuAM13", "2666342", "Archaea", "Archaea", "42", "0.0473", "", "NR", "RAP54450.1", "1945578", "g65005", "i0", "34.2", "0.890977443609023", "79", "47", "83.5", "1", "240", "19", "54", "132", "RAP54450.1 MAG: hypothetical protein BZ137_02130 [Methanosphaera sp. rholeuAM130]", "diamond", "237", "42", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanosphaera", "Methanosphaera sp. rholeuAM130"], [27815153, "PRJNA940501_S_NODE_272684_length_173_cov_1.661538_g271866_i0", "PRJNA940501", "272684", "173", "1.661538", "2.87446074", "Thermoplasmatota archaeon", "2806419", "Archaea", "Archaea", "39.7", "0.0449", "", "NR", "MCL4325421.1", "2806419", "g271866", "i0", "36.7", "0.84971098265896", "49", "30", "85", "1", "159", "13", "7", "54", "MCL4325421.1 helix-turn-helix domain-containing protein [Thermoplasmatota archaeon]", "diamond", "147", "39.7", "1", "Archaea", null, "Methanobacteriati", "Thermoplasmatota", null, null, null, null, "Thermoplasmatota archaeon"], [27941323, "PRJNA940501_S_NODE_322465_length_163_cov_1.108333_g321647_i0", "PRJNA940501", "322465", "163", "1.108333", "1.80658279", "Methanobrevibacter sp.", "66852", "Archaea", "Archaea", "94.7", "5.790000000000001e-21", "", "NR", "MDO5827583.1", "66852", "g321647", "i0", "88.7", "0.975460122699387", "53", "6", "97.5", "0", "161", "3", "275", "327", "MDO5827583.1 hypothetical protein [Methanobrevibacter sp.]", "diamond", "159", "94.7", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [28162349, "PRJNA940501_S_NODE_120745_length_225_cov_3.115385_g119927_i0", "PRJNA940501", "120745", "225", "3.115385", "7.00961625", "Methanobrevibacter smithii", "2173", "Archaea", "Archaea", "52", "9.42e-6", "", "NR", "WP_217423167.1", "2173", "g119927", "i0", "55.6", "0.6", "45", "20", "60", "0", "40", "174", "128", "172", "WP_217423167.1 hypothetical protein, partial [Methanobrevibacter smithii]", "diamond", "135", "52", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter smithii"], [28193622, "PRJNA940501_S_NODE_222006_length_186_cov_1.748252_g221188_i0", "PRJNA940501", "222006", "186", "1.748252", "3.25174872", "Methanobacteriota archaeon", "2026739", "Archaea", "Archaea", "43.9", "0.00663", "", "NR", "MDI9437242.1", "2026739", "g221188", "i0", "24.1", "1.87096774193548", "58", "44", "93.5", "0", "9", "182", "28", "85", "MDI9437242.1 UPF0104 family protein [Methanobacteriota archaeon]", "diamond", "348", "43.9", "1", "Archaea", null, "Methanobacteriati", "Methanobacteriota", null, null, null, null, "Methanobacteriota archaeon"], [28288357, "PRJNA940501_S_NODE_133506_length_219_cov_1.602273_g132688_i0", "PRJNA940501", "133506", "219", "1.602273", "3.50897787", "Methanobrevibacter smithii", "2173", "Archaea", "Archaea", "59.3", "1.57e-8", "", "NR", "WP_217423167.1", "2173", "g132688", "i0", "62.2", "0.616438356164384", "45", "17", "61.6", "0", "82", "216", "127", "171", "WP_217423167.1 hypothetical protein, partial [Methanobrevibacter smithii]", "diamond", "135", "59.3", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter smithii"], [28446531, "PRJNA940501_S_NODE_164146_length_205_cov_3.728395_g163328_i0", "PRJNA940501", "164146", "205", "3.728395", "7.64320975", "Methanobacteriota archaeon", "2026739", "Archaea", "Archaea", "42.4", "0.0304", "", "NR", "MDE1822239.1", "2026739", "g163328", "i0", "38.3", "0.878048780487805", "60", "36", "86.3", "1", "202", "26", "103", "162", "MDE1822239.1 hypothetical protein [Methanobacteriota archaeon]", "diamond", "180", "42.4", "1", "Archaea", null, "Methanobacteriati", "Methanobacteriota", null, null, null, null, "Methanobacteriota archaeon"], [28604277, "PRJNA940501_S_NODE_23227_length_348_cov_2.049180_g22409_i0", "PRJNA940501", "23227", "348", "2.04918", "7.1311464", "Haloferax sp. Atlit-12N", "2077203", "Archaea", "Archaea", "62", "1.68e-8", "", "NR", "WP_115883272.1", "2077203", "g22409", "i0", "38.8", "1.35344827586207", "85", "46", "69.8", "3", "14", "256", "228", "310", "WP_115883272.1 oxidoreductase [Haloferax sp. Atlit-12N]", "diamond", "471", "62", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Haloferacaceae", "Haloferax", "Haloferax sp. Atlit-12N"], [29015016, "PRJNA940501_S_NODE_114808_length_229_cov_1.263441_g113990_i0", "PRJNA940501", "114808", "229", "1.263441", "2.89327989", "Methanobrevibacter sp.", "66852", "Archaea", "Archaea", "159", "4.36e-44", "", "NR", "MDO5827839.1", "66852", "g113990", "i0", "100", "2.98689956331878", "76", "0", "99.6", "0", "1", "228", "7", "82", "MDO5827839.1 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase [Methanobrevibacter sp.]", "diamond", "684", "159", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [29046437, "PRJNA940501_S_NODE_5388_length_653_cov_3.552459_g4769_i0", "PRJNA940501", "5388", "653", "3.552459", "23.19755727", "Methanobacteriota archaeon", "2026739", "Archaea", "Archaea", "48.1", "0.0114", "", "NR", "MBV23123.1", "2026739", "g4769", "i0", "33.3", "0.385911179173047", "84", "45", "38.6", "3", "11", "262", "224", "296", "MBV23123.1 hypothetical protein [Methanobacteriota archaeon]", "diamond", "252", "48.1", "1", "Archaea", null, "Methanobacteriati", "Methanobacteriota", null, null, null, null, "Methanobacteriota archaeon"], [29046443, "PRJNA940501_S_NODE_62108_length_270_cov_1.035242_g61290_i0", "PRJNA940501", "62108", "270", "1.035242", "2.7951534", "Methanobacterium sp.", "2164", "Archaea", "Archaea", "154", "1.69e-44", "", "NR", "MCC7564358.1", "2164", "g61290", "i0", "90.6", "0.944444444444444", "85", "8", "94.4", "0", "256", "2", "124", "208", "MCC7564358.1 TatD family hydrolase [Methanobacterium sp.]", "diamond", "255", "154", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp."], [30063545, "PRJNA940501_S_NODE_7631_length_532_cov_2.192229_g6887_i0", "PRJNA940501", "7631", "532", "2.192229", "11.66265828", "root", "1", "Root_unresolved", "Root_unresolved", "53.9", "8.44e-5", "", "NR", "WP_405271529.1", "66852", "g6887", "i0", "27.8", "8.28947368421053", "151", "87", "85.2", "4", "515", "63", "262", "390", "WP_405271529.1 AMP-binding protein, partial [Methanobrevibacter sp.]", "diamond", "4410", "53.9", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [30783524, "PRJNA940501_S_NODE_55914_length_277_cov_1.769231_g55096_i0", "PRJNA940501", "55914", "277", "1.769231", "4.90076987", "Methanobrevibacter sp.", "66852", "Archaea", "Archaea", "43.1", "0.0396", "", "NR", "MBO7692507.1", "66852", "g55096", "i0", "59.5", "0.8014440433213", "37", "13", "40.1", "1", "230", "120", "228", "262", "MBO7692507.1 hypothetical protein [Methanobrevibacter sp.]", "diamond", "222", "43.1", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [30909982, "PRJNA940501_S_NODE_100734_length_237_cov_2.592784_g99916_i0", "PRJNA940501", "100734", "237", "2.592784", "6.14489808", "Methanofollis sp.", "2052835", "Archaea", "Archaea", "42.7", "0.0359", "", "NR", "MDK2974911.1", "2052835", "g99916", "i0", "30.6", "0.784810126582278", "62", "36", "69.6", "2", "40", "204", "483", "544", "MDK2974911.1 hypothetical protein [Methanofollis sp.]", "diamond", "186", "42.7", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanomicrobiales", "Methanomicrobiaceae", "Methanofollis", "Methanofollis sp."], [31068057, "PRJNA940501_S_NODE_5635_length_634_cov_4.622673_g4995_i0", "PRJNA940501", "5635", "634", "4.622673", "29.30774682", "Methanosarcinales archaeon", "2250255", "Archaea", "Archaea", "122", "6.57e-29", "", "NR", "RYE84491.1", "2250255", "g4995", "i0", "55.4", "2.69242902208202", "112", "47", "51.6", "1", "27", "353", "124", "235", "RYE84491.1 MAG: hypothetical protein EOO65_02170 [Methanosarcinales archaeon]", "diamond", "1707", "122", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanosarcinales", null, null, "Methanosarcinales archaeon"], [31074766, "PRJNA940501_S_NODE_111095_length_231_cov_1.489362_g110277_i0", "PRJNA940501", "111095", "231", "1.489362", "3.44042622", "root", "1", "Root_unresolved", "Root_unresolved", "47.4", "7.5e-4", "", "NR", "MEM4728511.1", "1906666", "g110277", "i0", "46.5", "3.22077922077922", "43", "22", "55.8", "1", "59", "187", "168", "209", "MEM4728511.1 putative Ig domain-containing protein [Thermoplasmata archaeon]", "diamond", "744", "47.8", "0.99163179916318", "Archaea", null, "Methanobacteriati", "Thermoplasmatota", "Thermoplasmata", null, null, null, "Thermoplasmata archaeon"], [31668594, "PRJNA940501_S_NODE_238377_length_182_cov_1.014388_g237559_i0", "PRJNA940501", "238377", "182", "1.014388", "1.84618616", "Methanobacterium sp. ACI-7", "3240853", "Archaea", "Archaea", "41.6", "0.0413", "", "NR", "WP_414469478.1", "3240853", "g237559", "i0", "40.4", "0.93956043956044", "57", "28", "85.7", "2", "181", "26", "32", "87", "WP_414469478.1 radical SAM protein [Methanobacterium sp. ACI-7]", "diamond", "171", "41.6", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp. ACI-7"], [31858355, "PRJNA940501_S_NODE_322217_length_163_cov_1.175000_g321399_i0", "PRJNA940501", "322217", "163", "1.175", "1.91525", "Methanosarcinales archaeon", "2250255", "Archaea", "Archaea", "100", "6.839999999999999e-23", "", "NR", "RYE85578.1", "2250255", "g321399", "i0", "75.9", "0.993865030674847", "54", "13", "99.4", "0", "162", "1", "46", "99", "RYE85578.1 MAG: hypothetical protein EOO65_00010 [Methanosarcinales archaeon]", "diamond", "162", "100", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanosarcinales", null, null, "Methanosarcinales archaeon"], [32016586, "PRJNA940501_S_NODE_168218_length_204_cov_1.459627_g167400_i0", "PRJNA940501", "168218", "204", "1.459627", "2.97763908", "Methanobacteriota archaeon", "2026739", "Archaea", "Archaea", "89", "1.16e-18", "", "NR", "MAD56215.1", "2026739", "g167400", "i0", "67.2", "1.97058823529412", "67", "21", "98.5", "1", "2", "202", "953", "1018", "MAD56215.1 hypothetical protein [Methanobacteriota archaeon]", "diamond", "402", "89", "1", "Archaea", null, "Methanobacteriati", "Methanobacteriota", null, null, null, null, "Methanobacteriota archaeon"], [32428047, "PRJNA940501_S_NODE_129499_length_221_cov_1.584270_g128681_i0", "PRJNA940501", "129499", "221", "1.58427", "3.5012367", "Methanoregula sp.", "2052170", "Archaea", "Archaea", "42", "0.0331", "", "NR", "MDD1680356.1", "2052170", "g128681", "i0", "37.2", "1.05882352941176", "78", "30", "82.8", "3", "208", "26", "56", "131", "MDD1680356.1 hypothetical protein [Methanoregula sp.]", "diamond", "234", "42", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanomicrobiales", "Methanoregulaceae", "Methanoregula", "Methanoregula sp."], [32523153, "PRJNA940501_S_NODE_203339_length_192_cov_1.261745_g202521_i0", "PRJNA940501", "203339", "192", "1.261745", "2.4225504", "Methanobacteriota archaeon", "2026739", "Archaea", "Archaea", "89", "3.53e-19", "", "NR", "MBT6072467.1", "2026739", "g202521", "i0", "60.9", "2", "64", "25", "100", "0", "192", "1", "47", "110", "MBT6072467.1 hypothetical protein [Methanobacteriota archaeon]", "diamond", "384", "89", "1", "Archaea", null, "Methanobacteriati", "Methanobacteriota", null, null, null, null, "Methanobacteriota archaeon"]], "truncated": false, "filtered_table_rows_count": 22, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_kingdom\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA940501", "p2": "Methanobacteriati"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA940501&tax_kingdom=Methanobacteriati", "results": [{"value": "PRJNA940501", "label": "PRJNA940501", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_kingdom=Methanobacteriati", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA940501&tax_kingdom=Methanobacteriati", "results": [{"value": "diamond", "label": "diamond", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA940501&tax_kingdom=Methanobacteriati", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA940501&tax_kingdom=Methanobacteriati", "results": [{"value": "Archaea", "label": "Archaea", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA940501&tax_kingdom=Methanobacteriati&tax_superkingdom=Archaea", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA940501&tax_kingdom=Methanobacteriati", "results": [{"value": "Methanomada group", "label": "Methanomada group", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA940501&tax_kingdom=Methanobacteriati&tax_clade=Methanomada+group", "selected": false}, {"value": "Stenosarchaea group", "label": "Stenosarchaea group", "count": 6, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA940501&tax_kingdom=Methanobacteriati&tax_clade=Stenosarchaea+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA940501&tax_kingdom=Methanobacteriati", "results": [{"value": "Methanobacteriati", "label": "Methanobacteriati", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA940501", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA940501&tax_kingdom=Methanobacteriati", "results": [{"value": "Methanobacteriota", "label": "Methanobacteriota", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA940501&tax_kingdom=Methanobacteriati&tax_phylum=Methanobacteriota", "selected": false}, {"value": "Thermoplasmatota", "label": "Thermoplasmatota", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA940501&tax_kingdom=Methanobacteriati&tax_phylum=Thermoplasmatota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 392.13344099971437}