{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA939415\" and tax_clade = \"delta/epsilon subdivisions\"", "rows": [[21318085, "PRJNA939415_P_NODE_68797_length_265_cov_1.885417_g68375_i0", "PRJNA939415", "68797", "265", "1.885417", "4.99635505", "Deltaproteobacteria bacterium HGW-Deltaproteobacteria-2", "2013747", "Bacteria", "Bacteria", "79.3", "5.51e-15", "", "NR", "PKN46493.1", "2013748", "g68375", "i0", "48.7", "0.883018867924528", "78", "38", "88.3", "1", "27", "260", "226", "301", "PKN46493.1 MAG: hypothetical protein CVU63_07515, partial [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20]", "diamond", "234", "79.3", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium HGW-Deltaproteobacteria-20"], [26874141, "PRJNA939415_P_NODE_83461_length_251_cov_0.865169_g83039_i0", "PRJNA939415", "83461", "251", "0.865169", "2.17157419", "Bacteria", "2", "Bacteria", "Bacteria", "110", "8.250000000000001e-26", "", "NR", "OQB15450.1", "1852869", "g83039", "i0", "62.2", "5.71314741035857", "82", "31", "98", "0", "246", "1", "684", "765", "OQB15450.1 MAG: FG-GAP repeat protein [Deltaproteobacteria bacterium ADurb.Bin207]", "diamond", "1434", "110", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium ADurb.Bin207"], [27278041, "PRJNA939415_P_NODE_39803_length_295_cov_2.725225_g39381_i0", "PRJNA939415", "39803", "295", "2.725225", "8.03941375", "Deltaproteobacteria bacterium GWA2_55_82", "1797810", "Bacteria", "Bacteria", "47.8", "0.00124", "", "NR", "OGP15958.1", "1797810", "g39381", "i0", "40", "0.508474576271186", "50", "30", "50.8", "0", "145", "294", "1041", "1090", "OGP15958.1 MAG: hypothetical protein A2Z79_07245 [Deltaproteobacteria bacterium GWA2_55_82]", "diamond", "150", "47.8", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium GWA2_55_82"], [27783368, "PRJNA939415_P_NODE_16944_length_378_cov_3.537705_g16524_i0", "PRJNA939415", "16944", "378", "3.537705", "13.3725249", "Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_65_9", "1973968", "Bacteria", "Bacteria", "231", "8.33e-76", "", "NR", "PJB30816.1", "1973968", "g16524", "i0", "90.4", "2.97619047619048", "125", "12", "99.2", "0", "376", "2", "33", "157", "PJB30816.1 MAG: peroxiredoxin [Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_65_9]", "diamond", "1125", "231", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium CG_4_9_14_3_um_filter_65_9"], [27979623, "PRJNA939415_P_NODE_112025_length_197_cov_5.709677_g111603_i0", "PRJNA939415", "112025", "197", "5.709677", "11.24806369", "Chloroflexota", "200795", "Bacteria", "Bacteria", "103", "1.41e-25", "", "NR", "PIR26531.1", "1973973", "g111603", "i0", "69.2", "8.90862944162436", "65", "20", "99", "0", "1", "195", "77", "141", "PIR26531.1 MAG: peptidase E [Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23]", "diamond", "1755", "103", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23"], [28105805, "PRJNA939415_P_NODE_5265_length_873_cov_3.458750_g4877_i0", "PRJNA939415", "5265", "873", "3.45875", "30.1948875", "Bacteria", "2", "Bacteria", "Bacteria", "305", "4.479999999999999e-101", "", "NR", "OGR03293.1", "1797903", "g4877", "i0", "64.8", "5.53264604810997", "230", "81", "79", "0", "872", "183", "8", "237", "OGR03293.1 MAG: ABC transporter ATP-binding protein [Deltaproteobacteria bacterium RIFOXYD12_FULL_53_23]", "diamond", "4830", "307", "0.993485342019544", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium RIFOXYD12_FULL_53_23"], [28863617, "PRJNA939415_P_NODE_67148_length_266_cov_4.621762_g66726_i0", "PRJNA939415", "67148", "266", "4.621762", "12.29388692", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "54.3", "3.97e-6", "", "NR", "MEC8341679.1", "2024889", "g66726", "i0", "46.6", "7.09398496240602", "58", "31", "65.4", "0", "49", "222", "2", "59", "MEC8341679.1 AAA family ATPase [SAR324 cluster bacterium]", "diamond", "1887", "54.7", "0.992687385740402", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "SAR324 cluster bacterium"], [29211171, "PRJNA939415_P_NODE_12169_length_443_cov_9.624324_g11750_i0", "PRJNA939415", "12169", "443", "9.624324", "42.63575532", "Pseudomonadota", "1224", "Bacteria", "Bacteria", "210", "3.96e-62", "", "NR", "OGR03277.1", "1797903", "g11750", "i0", "74.5", "3.96839729119639", "145", "37", "98.2", "0", "441", "7", "23", "167", "OGR03277.1 MAG: secretion system protein E [Deltaproteobacteria bacterium RIFOXYD12_FULL_53_23]", "diamond", "1758", "210", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium RIFOXYD12_FULL_53_23"], [29810787, "PRJNA939415_P_NODE_111051_length_202_cov_4.170543_g110629_i0", "PRJNA939415", "111051", "202", "4.170543", "8.42449686", "Bacteria", "2", "Bacteria", "Bacteria", "92", "5.51e-20", "", "NR", "OGQ91634.1", "1797895", "g110629", "i0", "69.7", "3.92079207920792", "66", "20", "98", "0", "3", "200", "331", "396", "OGQ91634.1 MAG: multidrug ABC transporter substrate-binding protein [Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15]", "diamond", "792", "92", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15"], [29930438, "PRJNA939415_P_NODE_100351_length_234_cov_3.279503_g99929_i0", "PRJNA939415", "100351", "234", "3.279503", "7.67403702", "Bradymonas sediminis", "1548548", "Bacteria", "Bacteria", "67.4", "6.61e-11", "", "NR", "WP_111336193.1", "1548548", "g99929", "i0", "46.2", "6.83333333333333", "65", "35", "83.3", "0", "199", "5", "4", "68", "WP_111336193.1 AMP-dependent synthetase/ligase [Bradymonas sediminis]", "diamond", "1599", "67.4", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", "Bradymonadales", "Bradymonadaceae", "Bradymonas", "Bradymonas sediminis"], [31004581, "PRJNA939415_P_NODE_41134_length_293_cov_1.750000_g40712_i0", "PRJNA939415", "41134", "293", "1.75", "5.1275", "Deltaproteobacteria bacterium RIFOXYD12_FULL_53_23", "1797903", "Bacteria", "Bacteria", "92.8", "1.5e-20", "", "NR", "OGR03272.1", "1797903", "g40712", "i0", "53", "0.849829351535836", "83", "39", "85", "0", "2", "250", "173", "255", "OGR03272.1 MAG: hypothetical protein A2520_04175 [Deltaproteobacteria bacterium RIFOXYD12_FULL_53_23]", "diamond", "249", "92.8", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium RIFOXYD12_FULL_53_23"], [31896887, "PRJNA939415_P_NODE_84457_length_250_cov_1.361582_g84035_i0", "PRJNA939415", "84457", "250", "1.361582", "3.403955", "Bacteria", "2", "Bacteria", "Bacteria", "63.5", "1.48e-9", "", "NR", "OQB09973.1", "1852869", "g84035", "i0", "39", "1.968", "82", "49", "98.4", "1", "3", "248", "146", "226", "OQB09973.1 MAG: hypothetical protein BWY17_04432 [Deltaproteobacteria bacterium ADurb.Bin207]", "diamond", "492", "63.5", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", null, null, null, "Deltaproteobacteria bacterium ADurb.Bin207"], [32427997, "PRJNA939415_P_NODE_79819_length_254_cov_2.331492_g79397_i0", "PRJNA939415", "79819", "254", "2.331492", "5.92198968", "Bradymonadales bacterium", "2099667", "Bacteria", "Bacteria", "62.8", "3.36e-9", "", "NR", "MBN1947766.1", "2099667", "g79397", "i0", "35.4", "0.968503937007874", "82", "52", "96.9", "1", "5", "250", "105", "185", "MBN1947766.1 CDP-alcohol phosphatidyltransferase family protein [Bradymonadales bacterium]", "diamond", "246", "62.8", "1", "Bacteria", "delta/epsilon subdivisions", null, null, "Deltaproteobacteria", "Bradymonadales", null, null, "Bradymonadales bacterium"]], "truncated": false, "filtered_table_rows_count": 13, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA939415", "p2": "delta/epsilon subdivisions"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA939415&tax_clade=delta%2Fepsilon+subdivisions", "results": [{"value": "PRJNA939415", "label": "PRJNA939415", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_clade=delta%2Fepsilon+subdivisions", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA939415&tax_clade=delta%2Fepsilon+subdivisions", "results": [{"value": "diamond", "label": "diamond", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA939415&tax_clade=delta%2Fepsilon+subdivisions", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA939415&tax_clade=delta%2Fepsilon+subdivisions", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA939415&tax_clade=delta%2Fepsilon+subdivisions&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA939415&tax_clade=delta%2Fepsilon+subdivisions", "results": [{"value": "delta/epsilon subdivisions", "label": "delta/epsilon subdivisions", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA939415", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA939415&tax_clade=delta%2Fepsilon+subdivisions", "results": [], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA939415&tax_clade=delta%2Fepsilon+subdivisions", "results": [], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 178.3999980034423}