{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA888104\" and tax_kingdom = \"Pseudomonadati\"", "rows": [[8515136, "PRJNA888104_P_NODE_19547_length_235_cov_0.879518_g19478_i0", "PRJNA888104", "19547", "235", "0.879518", "2.0668673", "Vogesella mureinivorans", "657276", "Bacteria", "Bacteria", "159", "6.499999999999998e-44", "", "NR", "WP_206208781.1", "657276", "g19478", "i0", "94.8", "0.982978723404255", "77", "4", "98.3", "0", "233", "3", "227", "303", "WP_206208781.1 sensor histidine kinase [Vogesella mureinivorans]", "diamond", "231", "159", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Neisseriales", "Chromobacteriaceae", "Vogesella", "Vogesella mureinivorans"], [12341457, "PRJNA888104_P_NODE_23310_length_228_cov_0.899371_g23241_i0", "PRJNA888104", "23310", "228", "0.899371", "2.05056588", "Undibacterium luofuense", "2828733", "Bacteria", 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"1.71e-24", "", "NR", "WP_144371743.1", "2592656", "g18622", "i0", "76.9", "0.987341772151899", "78", "18", "98.7", "0", "237", "4", "81", "158", "WP_144371743.1 hypothetical protein [Vogesella urethralis]", "diamond", "234", "100", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Neisseriales", "Chromobacteriaceae", "Vogesella", "Vogesella urethralis"], [29960664, "PRJNA888104_P_NODE_13171_length_283_cov_1.009346_g13102_i0", "PRJNA888104", "13171", "283", "1.009346", "2.85644918", "Minicystis sp.", "1971901", "Bacteria", "Bacteria", "43.1", "0.023", "", "NR", "MFT3765475.1", "1971901", "g13102", "i0", "31.7", "0.869257950530035", "82", "41", "71", "3", "207", "7", "43", "124", "MFT3765475.1 CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6 [Minicystis sp.]", "diamond", "246", "43.1", "1", "Bacteria", null, "Pseudomonadati", "Myxococcota", null, "Polyangiales", "Polyangiaceae", "Minicystis", "Minicystis sp."], [30340378, "PRJNA888104_P_NODE_16772_length_251_cov_3.082418_g16703_i0", "PRJNA888104", "16772", "251", "3.082418", "7.73686918", "Vogesella mureinivorans", "657276", "Bacteria", "Bacteria", "50.1", "4.17e-6", "", "NR", "WP_206209029.1", "657276", "g16703", "i0", "65.2", "0.549800796812749", "46", "16", "55", "0", "18", "155", "1", "46", "WP_206209029.1 hypothetical protein [Vogesella mureinivorans]", "diamond", "138", "50.1", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Neisseriales", "Chromobacteriaceae", "Vogesella", "Vogesella mureinivorans"], [30750656, "PRJNA888104_P_NODE_20574_length_233_cov_0.890244_g20505_i0", "PRJNA888104", "20574", "233", "0.890244", "2.07426852", "Pectobacterium brasiliense", "180957", "Bacteria", "Bacteria", "119", "5.03e-29", "", "NR", "WP_268198261.1", "180957", "g20505", "i0", "72.7", "7.931330472103", "77", "21", "99.1", "0", "1", "231", "462", "538", "WP_268198261.1 hypothetical protein [Pectobacterium brasiliense]", "diamond", "1848", "119", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Pectobacteriaceae", "Pectobacterium", "Pectobacterium brasiliense"], [31105873, "PRJNA888104_P_NODE_11555_length_298_cov_1.912664_g11486_i0", "PRJNA888104", "11555", "298", "1.912664", "5.69973872", "Sphingopyxis", "165697", "Bacteria", "Bacteria", "80.9", "4.16e-16", "", "NR", "MBL8648820.1", "1908224", "g11486", "i0", "48.7", "7.31879194630872", "76", "38", "75.5", "1", "226", "2", "1", "76", "MBL8648820.1 NRDE family protein [Sphingopyxis sp.]", "diamond", "2181", "80.9", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Alphaproteobacteria", "Sphingomonadales", "Sphingomonadaceae", "Sphingopyxis", "Sphingopyxis sp."], [31770069, "PRJNA888104_P_NODE_2417_length_609_cov_1.833333_g2350_i0", "PRJNA888104", "2417", "609", "1.833333", "11.16499797", "Pseudomonadota", "1224", "Bacteria", "Bacteria", "74.3", "1.82e-13", "", "NR", "WP_028024190.1", "91359", "g2350", "i0", "36.8", "2.46305418719212", "95", "60", "46.8", "0", "174", "458", "4", "98", "WP_028024190.1 hypothetical protein [Enterovibrio calviensis]", "diamond", "1500", "74.7", "0.994645247657296", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Vibrionales", "Vibrionaceae", "Enterovibrio", "Enterovibrio calviensis"], [32584956, "PRJNA888104_P_NODE_14019_length_274_cov_2.517073_g13950_i0", "PRJNA888104", "14019", "274", "2.517073", "6.89678002", "Verrucomicrobiales bacterium", "2026801", "Bacteria", "Bacteria", "44.7", "0.0109", "", "NR", "NNE91183.1", "2026801", "g13950", "i0", "36.8", "0.624087591240876", "57", "35", "61.3", "1", "183", "16", "269", "325", "NNE91183.1 tRNA guanosine(34) transglycosylase Tgt [Verrucomicrobiales bacterium]", "diamond", "171", "44.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", null, null, "Verrucomicrobiales bacterium"]], "truncated": false, "filtered_table_rows_count": 22, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_kingdom\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA888104", "p2": "Pseudomonadati"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA888104&tax_kingdom=Pseudomonadati", "results": [{"value": "PRJNA888104", "label": "PRJNA888104", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA888104&tax_kingdom=Pseudomonadati", "results": 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"http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA888104&tax_kingdom=Pseudomonadati&tax_clade=FCB+group", "selected": false}, {"value": "PVC group", "label": "PVC group", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA888104&tax_kingdom=Pseudomonadati&tax_clade=PVC+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA888104&tax_kingdom=Pseudomonadati", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA888104", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA888104&tax_kingdom=Pseudomonadati", "results": [{"value": "Pseudomonadota", "label": "Pseudomonadota", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA888104&tax_kingdom=Pseudomonadati&tax_phylum=Pseudomonadota", "selected": false}, {"value": "Bacteroidota", "label": "Bacteroidota", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA888104&tax_kingdom=Pseudomonadati&tax_phylum=Bacteroidota", "selected": false}, {"value": "Bdellovibrionota", "label": "Bdellovibrionota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA888104&tax_kingdom=Pseudomonadati&tax_phylum=Bdellovibrionota", "selected": false}, {"value": "Ignavibacteriota", "label": "Ignavibacteriota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA888104&tax_kingdom=Pseudomonadati&tax_phylum=Ignavibacteriota", "selected": false}, {"value": "Myxococcota", "label": "Myxococcota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA888104&tax_kingdom=Pseudomonadati&tax_phylum=Myxococcota", "selected": false}, {"value": "Nitrospirota", "label": "Nitrospirota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA888104&tax_kingdom=Pseudomonadati&tax_phylum=Nitrospirota", "selected": false}, {"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA888104&tax_kingdom=Pseudomonadati&tax_phylum=Verrucomicrobiota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 408.5248980045435}