{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA792582\" and tax_phylum = \"Mycoplasmatota\"", "rows": [[4605583, "PRJNA792582_P_NODE_58544_length_242_cov_0.911243_g57730_i0", "PRJNA792582", "58544", "242", "0.911243", "2.20520806", "Mollicutes", "31969", "Bacteria", "Bacteria", "133", "3.4299999999999995e-37", "", "NR", "MBD5445969.1", "2108", "g57730", "i0", "77.5", "3.96694214876033", "80", "18", "99.2", "0", "242", "3", "83", "162", "MBD5445969.1 30S ribosomal protein S5 [Mycoplasma sp.]", "diamond", "960", "133", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", "Mollicutes", "Mycoplasmatales", "Mycoplasmataceae", "Mycoplasma", "Mycoplasma sp."], [19903718, "PRJNA792582_P_NODE_33416_length_298_cov_1.702222_g32602_i0", "PRJNA792582", "33416", "298", "1.702222", "5.07262156", "Mycoplasmataceae bacterium", "2685873", "Bacteria", "Bacteria", "109", "1.48e-25", "", "NR", "MDK2819925.1", "2685873", "g32602", "i0", "59.2", "3.06040268456376", "98", "34", "98.7", "1", "4", "297", "190", "281", "MDK2819925.1 APC family permease [Mycoplasmataceae bacterium]", "diamond", "912", "109", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", "Mollicutes", "Mycoplasmatales", "Mycoplasmataceae", null, "Mycoplasmataceae bacterium"], [19903930, "PRJNA792582_P_NODE_51776_length_249_cov_0.875000_g50962_i0", "PRJNA792582", "51776", "249", "0.875", "2.17875", "Malacoplasma sp.", "2791014", "Bacteria", "Bacteria", "81.3", "1.13e-15", "", "NR", "MCF0217436.1", "2791014", "g50962", "i0", "60.3", "2.20481927710843", "63", "25", "75.9", "0", "237", "49", "21", "83", "MCF0217436.1 TROVE domain-containing protein [Malacoplasma sp.]", "diamond", "549", "81.3", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Mycoplasmoidaceae", "Malacoplasma", "Malacoplasma sp."], [22454497, "PRJNA792582_P_NODE_59218_length_241_cov_0.916667_g58404_i0", "PRJNA792582", "59218", "241", "0.916667", "2.20916747", "Malacoplasma iowae", "2116", "Bacteria", "Bacteria", "103", "5.879999999999999e-24", "", "NR", "WP_406646931.1", "2116", "g58404", "i0", "58.2", "1.96680497925311", "79", "33", "98.3", "0", "239", "3", "271", "349", "WP_406646931.1 amidase family protein [Malacoplasma iowae]", "diamond", "474", "103", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Mycoplasmoidaceae", "Malacoplasma", "Malacoplasma iowae"], [22892911, "PRJNA792582_P_NODE_18418_length_401_cov_1.173780_g17604_i0", "PRJNA792582", "18418", "401", "1.17378", "4.7068578", "Bacteria", "2", "Bacteria", "Bacteria", "104", "5.94e-24", "", "NR", "MDR2823098.1", "2685873", "g17604", "i0", "77.3", "8.3715710723192", "66", "14", "48.6", "1", "130", "324", "107", "172", "MDR2823098.1 type I glyceraldehyde-3-phosphate dehydrogenase [Mycoplasmataceae bacterium]", "diamond", "3357", "105", "0.990476190476191", "Bacteria", null, "Bacillati", "Mycoplasmatota", "Mollicutes", "Mycoplasmatales", "Mycoplasmataceae", null, "Mycoplasmataceae bacterium"], [27022189, "PRJNA792582_P_NODE_55662_length_245_cov_0.895349_g54848_i0", "PRJNA792582", "55662", "245", "0.895349", "2.19360505", "Mycoplasma sp.", "2108", "Bacteria", "Bacteria", "49.3", "1.9e-4", "", "NR", "MBD5446104.1", "2108", "g54848", "i0", "34.8", "1.68979591836735", "69", "36", "84.5", "2", "36", "242", "959", "1018", "MBD5446104.1 hypothetical protein [Mycoplasma sp.]", "diamond", "414", "49.3", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", "Mollicutes", "Mycoplasmatales", "Mycoplasmataceae", "Mycoplasma", "Mycoplasma sp."], [27536930, "PRJNA792582_P_NODE_42843_length_270_cov_1.502538_g42029_i0", "PRJNA792582", "42843", "270", "1.502538", "4.0568526", "Malacoplasma", "2791001", "Bacteria", "Bacteria", "132", "5.51e-36", "", "NR", "WP_004024704.1", "2116", "g42029", "i0", "75.3", "2.96666666666667", "89", "22", "98.9", "0", "269", "3", "76", "164", "WP_004024704.1 50S ribosomal protein L3 [Malacoplasma iowae]", "diamond", "801", "132", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Mycoplasmoidaceae", "Malacoplasma", "Malacoplasma iowae"], [29327363, "PRJNA792582_P_NODE_56509_length_244_cov_0.900585_g55695_i0", "PRJNA792582", "56509", "244", "0.900585", "2.1974274", "Ureaplasma sp.", "1965234", "Bacteria", "Bacteria", "68.9", "2.06e-11", "", "NR", "MDE5651448.1", "1965234", "g55695", "i0", "48.4", "3.11065573770492", "64", "33", "78.7", "0", "208", "17", "10", "73", "MDE5651448.1 aminotransferase class V-fold PLP-dependent enzyme [Ureaplasma sp.]", "diamond", "759", "68.9", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Mycoplasmoidaceae", "Ureaplasma", "Ureaplasma sp."], [29611291, "PRJNA792582_P_NODE_13550_length_465_cov_1.448980_g12738_i0", "PRJNA792582", "13550", "465", "1.44898", "6.737757", "Malacoplasma muris", "2119", "Bacteria", "Bacteria", "172", "1.4599999999999999e-46", "", "NR", "WP_412032115.1", "2119", "g12738", "i0", "69", "0.832258064516129", "129", "37", "82.6", "3", "58", "441", "20", "146", "WP_412032115.1 PTS transporter subunit IIABC [Malacoplasma muris]", "diamond", "387", "172", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Mycoplasmoidaceae", "Malacoplasma", "Malacoplasma muris"], [32045345, "PRJNA792582_P_NODE_58418_length_242_cov_0.911243_g57604_i0", "PRJNA792582", "58418", "242", "0.911243", "2.20520806", "Mycoplasmataceae bacterium", "2685873", "Bacteria", "Bacteria", "80.5", "1.79e-15", "", "NR", "MDK2819538.1", "2685873", "g57604", "i0", "82.2", "0.557851239669422", "45", "8", "55.8", "0", "181", "47", "19", "63", "MDK2819538.1 PTS sugar transporter subunit IIC [Mycoplasmataceae bacterium]", "diamond", "135", "80.5", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", "Mollicutes", "Mycoplasmatales", "Mycoplasmataceae", null, "Mycoplasmataceae bacterium"]], "truncated": false, "filtered_table_rows_count": 10, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA792582", "p2": "Mycoplasmatota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA792582&tax_phylum=Mycoplasmatota", "results": [{"value": "PRJNA792582", "label": "PRJNA792582", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Mycoplasmatota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA792582&tax_phylum=Mycoplasmatota", "results": [{"value": "diamond", "label": "diamond", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA792582&tax_phylum=Mycoplasmatota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA792582&tax_phylum=Mycoplasmatota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA792582&tax_phylum=Mycoplasmatota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA792582&tax_phylum=Mycoplasmatota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA792582&tax_phylum=Mycoplasmatota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA792582&tax_phylum=Mycoplasmatota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA792582&tax_phylum=Mycoplasmatota", "results": [{"value": "Mycoplasmatota", "label": "Mycoplasmatota", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA792582", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 405.4522169899428}