{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA763718\" and tax_kingdom = \"Pseudomonadati\"", "rows": [[7122914, "PRJNA763718_S_NODE_4906_length_198_cov_1.372671_g4698_i0", "PRJNA763718", "4906", "198", "1.372671", "2.71788858", "Cloacibacterium", "501783", "Bacteria", "Bacteria", "72", "9.66e-13", "", "NR", "MEN9487606.1", "1898104", "g4698", "i0", "55.2", "6.09090909090909", "67", "28", "98.5", "1", "2", "196", "817", "883", "MEN9487606.1 hypothetical protein [Bacteroidota bacterium]", "diamond", "1206", "72", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", null, null, null, null, "Bacteroidota bacterium"], [26609787, "PRJNA763718_S_NODE_7901_length_157_cov_0.966667_g7693_i0", "PRJNA763718", "7901", "157", "0.966667", "1.51766719", "unclassified Pseudoalteromonas", "194690", "Bacteria", "Bacteria", "111", "5.940000000000001e-27", "", "NR", "WP_024597516.1", "194690", 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"WP_170056679.1 RNA-directed DNA polymerase, partial [Neoroseomonas marina]", "diamond", "930", "42.4", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Alphaproteobacteria", "Acetobacterales", "Acetobacteraceae", "Neoroseomonas", "Neoroseomonas marina"], [29999797, "PRJNA763718_S_NODE_5711_length_183_cov_1.232877_g5503_i0", "PRJNA763718", "5711", "183", "1.232877", "2.25616491", "Pseudomonadota", "1224", "Bacteria", "Bacteria", "51.2", "1.63e-5", "", "NR", "WP_235184783.1", "29487", "g5503", "i0", "48.3", "4.85245901639344", "58", "27", "95.1", "1", "1", "174", "244", "298", "WP_235184783.1 MULTISPECIES: phage tail protein [Photorhabdus]", "diamond", "888", "51.2", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Morganellaceae", "Photorhabdus", null], [30338024, "PRJNA763718_S_NODE_6672_length_169_cov_6.090909_g6464_i0", "PRJNA763718", "6672", "169", "6.090909", "10.29363621", "Planctomycetota bacterium", "2026780", "Bacteria", "Bacteria", "42.7", "0.0132", "", "NR", "MBM4009064.1", "2026780", "g6464", "i0", "38.5", "1.38461538461538", "39", "21", "63.9", "1", "12", "119", "137", "175", "MBM4009064.1 DMT family transporter [Planctomycetota bacterium]", "diamond", "234", "42.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Planctomycetota", null, null, null, null, "Planctomycetota bacterium"], [30621783, "PRJNA763718_S_NODE_3513_length_237_cov_3.270000_g3305_i0", "PRJNA763718", "3513", "237", "3.27", "7.7499", "Borrelia miyamotoi", "47466", "Bacteria", "Bacteria", "79.3", "2.06e-15", "", "NR", "WP_152300945.1", "47466", "g3305", "i0", "54.5", "4.87341772151899", "77", "35", "97.5", "0", "235", "5", "142", "218", "WP_152300945.1 L-lactate dehydrogenase [Borrelia miyamotoi]", "diamond", "1155", "79.3", "1", "Bacteria", null, "Pseudomonadati", "Spirochaetota", "Spirochaetia", "Spirochaetales", "Borreliaceae", "Borrelia", "Borrelia miyamotoi"], [30653336, 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"Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [31064490, "PRJNA763718_S_NODE_5975_length_179_cov_1.070423_g5767_i0", "PRJNA763718", "5975", "179", "1.070423", "1.91605717", "Sorangiineae bacterium NIC37A_2", "1970199", "Bacteria", "Bacteria", "97.1", "9.58e-22", "", "NR", "OQX66423.1", "1970199", "g5767", "i0", "75.9", "0.972067039106145", "58", "14", "97.2", "0", "2", "175", "315", "372", "OQX66423.1 MAG: hypothetical protein B6A08_20570 [Sorangiineae bacterium NIC37A_2]", "diamond", "174", "97.1", "1", "Bacteria", null, "Pseudomonadati", "Myxococcota", "Myxococcia", "Myxococcales", null, null, "Sorangiineae bacterium NIC37A_2"], [31190265, "PRJNA763718_S_NODE_7255_length_163_cov_1.539683_g7047_i0", "PRJNA763718", "7255", "163", "1.539683", "2.50968329", "Aeromonas", "642", "Bacteria", "Bacteria", "107", "1.09e-27", "", "NR", "WP_019444962.1", "642", "g7047", "i0", "100", "0.975460122699387", "53", "0", "97.5", "0", "3", "161", "49", "101", "WP_019444962.1 MULTISPECIES: ImmA/IrrE family metallo-endopeptidase [Aeromonas]", "diamond", "159", "107", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Aeromonadales", "Aeromonadaceae", "Aeromonas", null], [31222014, "PRJNA763718_S_NODE_6475_length_172_cov_1.051852_g6267_i0", "PRJNA763718", "6475", "172", "1.051852", "1.80918544", "Polyangiaceae bacterium", "2268199", "Bacteria", "Bacteria", "45.8", "3.77e-4", "", "NR", "HXS16005.1", "2268199", "g6267", "i0", "50", "0.906976744186046", "52", "26", "90.7", "0", "16", "171", "11", "62", "HXS16005.1 ATP synthase subunit I [Polyangiaceae bacterium]", "diamond", "156", "45.8", "1", "Bacteria", null, "Pseudomonadati", "Myxococcota", null, "Polyangiales", "Polyangiaceae", null, "Polyangiaceae bacterium"], [31601967, "PRJNA763718_S_NODE_6696_length_169_cov_2.303030_g6488_i0", "PRJNA763718", "6696", "169", "2.30303", "3.8921207", "Aeromonas", "642", "Bacteria", "Bacteria", "52.4", "2.64e-6", "", "NR", "WP_019444962.1", "642", "g6488", "i0", "96.3", "0.479289940828402", "27", "1", "47.9", "0", "89", "169", "1", "27", "WP_019444962.1 MULTISPECIES: ImmA/IrrE family metallo-endopeptidase [Aeromonas]", "diamond", "81", "52.4", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Aeromonadales", "Aeromonadaceae", "Aeromonas", null], [32686389, "PRJNA763718_S_NODE_7680_length_159_cov_0.942623_g7472_i0", "PRJNA763718", "7680", "159", "0.942623", "1.49877057", "Bacteria", "2", "Bacteria", "Bacteria", "45.1", "0.00187", "", "NR", "MEI6226463.1", "2026735", "g7472", "i0", "48", "3.81132075471698", "50", "26", "94.3", "0", "156", "7", "92", "141", "MEI6226463.1 DDE-type integrase/transposase/recombinase [Deltaproteobacteria bacterium]", "diamond", "606", "45.1", "1", "Bacteria", null, "Pseudomonadati", "Myxococcota", "Myxococcia", null, null, null, "Deltaproteobacteria bacterium"]], "truncated": false, "filtered_table_rows_count": 22, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_kingdom\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA763718", "p2": "Pseudomonadati"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718&tax_kingdom=Pseudomonadati", "results": [{"value": "PRJNA763718", "label": "PRJNA763718", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718&tax_kingdom=Pseudomonadati", "results": [{"value": "diamond", "label": "diamond", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA763718&tax_kingdom=Pseudomonadati", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718&tax_kingdom=Pseudomonadati", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718&tax_kingdom=Pseudomonadati&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718&tax_kingdom=Pseudomonadati", "results": [{"value": "FCB group", "label": "FCB group", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718&tax_kingdom=Pseudomonadati&tax_clade=FCB+group", "selected": false}, {"value": "PVC group", "label": "PVC group", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718&tax_kingdom=Pseudomonadati&tax_clade=PVC+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718&tax_kingdom=Pseudomonadati", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718&tax_kingdom=Pseudomonadati", "results": [{"value": "Pseudomonadota", "label": "Pseudomonadota", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718&tax_kingdom=Pseudomonadati&tax_phylum=Pseudomonadota", "selected": false}, {"value": "Bacteroidota", "label": "Bacteroidota", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718&tax_kingdom=Pseudomonadati&tax_phylum=Bacteroidota", "selected": false}, {"value": "Myxococcota", "label": "Myxococcota", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718&tax_kingdom=Pseudomonadati&tax_phylum=Myxococcota", "selected": false}, {"value": "Planctomycetota", "label": "Planctomycetota", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718&tax_kingdom=Pseudomonadati&tax_phylum=Planctomycetota", "selected": false}, {"value": "Acidobacteriota", "label": "Acidobacteriota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718&tax_kingdom=Pseudomonadati&tax_phylum=Acidobacteriota", "selected": false}, {"value": "Campylobacterota", "label": "Campylobacterota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718&tax_kingdom=Pseudomonadati&tax_phylum=Campylobacterota", "selected": false}, {"value": "Chlamydiota", "label": "Chlamydiota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718&tax_kingdom=Pseudomonadati&tax_phylum=Chlamydiota", "selected": false}, {"value": "Spirochaetota", "label": "Spirochaetota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA763718&tax_kingdom=Pseudomonadati&tax_phylum=Spirochaetota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 230.24503501073923}