{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA753112\" and tax_phylum = \"Actinomycetota\"", "rows": [[8854709, "PRJNA753112_P_NODE_33307_length_243_cov_0.917647_g32965_i0", "PRJNA753112", "33307", "243", "0.917647", "2.22988221", "Nocardioides jiangsuensis", "2866161", "Bacteria", "Bacteria", "122", "1.98e-30", "", "NR", "WP_221026628.1", "2866161", "g32965", "i0", "86.1", "0.975308641975309", "79", "11", "97.5", "0", "238", "2", "289", "367", "WP_221026628.1 potassium-transporting ATPase subunit KdpA [Nocardioides jiangsuensis]", "diamond", "237", "122", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Nocardioidaceae", "Nocardioides", "Nocardioides jiangsuensis"], [24955709, "PRJNA753112_P_NODE_32340_length_245_cov_0.906977_g31998_i0", "PRJNA753112", "32340", "245", "0.906977", "2.22209365", "Microbacterium ginsengisoli", "400772", "Bacteria", "Bacteria", "166", "2.58e-48", "", "NR", "WP_045247539.1", "400772", "g31998", "i0", "97.5", "0.979591836734694", "80", "2", "98", "0", "240", "1", "216", "295", "WP_045247539.1 Rv2578c family radical SAM protein [Microbacterium ginsengisoli]", "diamond", "240", "166", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", "Microbacterium", "Microbacterium ginsengisoli"], [26704486, "PRJNA753112_P_NODE_28941_length_253_cov_0.866667_g28599_i0", "PRJNA753112", "28941", "253", "0.866667", "2.19266751", "Nocardia sp. alder85J", "2862949", "Bacteria", "Bacteria", "49.7", "1.43e-4", "", "NR", "WP_323138010.1", "2862949", "g28599", "i0", "40.2", "1.94466403162055", "82", "39", "96", "3", "10", "252", "219", "291", "WP_323138010.1 metal-dependent hydrolase [Nocardia sp. alder85J]", "diamond", "492", "49.7", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Nocardiaceae", "Nocardia", "Nocardia sp. alder85J"], [27337478, "PRJNA753112_P_NODE_29923_length_250_cov_1.514124_g29581_i0", "PRJNA753112", "29923", "250", "1.514124", "3.78531", "Nocardioides aquiterrae", "203799", "Bacteria", "Bacteria", "58.2", "8.81e-8", "", "NR", "GAA1164235.1", "203799", "g29581", "i0", "58.1", "0.744", "62", "25", "73.2", "1", "31", "213", "31", "92", "GAA1164235.1 hypothetical protein GCM10009606_47390 [Nocardioides aquiterrae]", "diamond", "186", "58.2", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Nocardioidaceae", "Nocardioides", "Nocardioides aquiterrae"], [27400675, "PRJNA753112_P_NODE_31683_length_246_cov_1.317919_g31341_i0", "PRJNA753112", "31683", "246", "1.317919", "3.24208074", "Streptomyces tendae", "1932", "Bacteria", "Bacteria", "44.7", "0.00811", "", "NR", "MFJ3044153.1", "1932", "g31341", "i0", "59.5", "0.451219512195122", "37", "13", "45.1", "1", "131", "241", "714", "748", "MFJ3044153.1 hypothetical protein [Streptomyces tendae]", "diamond", "111", "44.7", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces tendae"], [27558222, "PRJNA753112_P_NODE_8084_length_480_cov_2.732187_g7742_i0", "PRJNA753112", "8084", "480", "2.732187", "13.1144976", "Curtobacterium sp. ER1/6", "1891920", "Bacteria", "Bacteria", "45.1", "0.0496", "", "NR", "OEI69057.1", "1891920", "g7742", "i0", "33.3", "0.9375", "150", "88", "89.4", "3", "17", "445", "36", "180", "OEI69057.1 hypothetical protein Cus16_0887 [Curtobacterium sp. ER1/6]", "diamond", "450", "45.1", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", "Curtobacterium", "Curtobacterium sp. ER1/6"], [28032132, "PRJNA753112_P_NODE_24765_length_274_cov_1.363184_g24423_i0", "PRJNA753112", "24765", "274", "1.363184", "3.73512416", "Micromonospora aurantiaca", "47850", "Bacteria", "Bacteria", "45.1", "0.0056", "", "NR", "WP_162881542.1", "47850", "g24423", "i0", "38.2", "1.80656934306569", "55", "32", "58", "1", "36", "194", "144", "198", "WP_162881542.1 DUF4352 domain-containing protein [Micromonospora aurantiaca]", "diamond", "495", "45.1", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micromonosporales", "Micromonosporaceae", "Micromonospora", "Micromonospora aurantiaca (nom. illeg.)"], [28032133, "PRJNA753112_P_NODE_27565_length_259_cov_1.268817_g27223_i0", "PRJNA753112", "27565", "259", "1.268817", "3.28623603", "Saccharothrix variisporea", "543527", "Bacteria", "Bacteria", "43.5", "0.025", "", "NR", "WP_246029499.1", "543527", "g27223", "i0", "40", "0.694980694980695", "60", "32", "64.9", "2", "92", "259", "884", "943", "WP_246029499.1 hypothetical protein [Saccharothrix variisporea]", "diamond", "180", "43.5", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Pseudonocardiales", "Pseudonocardiaceae", "Saccharothrix", "Saccharothrix variisporea"], [30589916, "PRJNA753112_P_NODE_11693_length_397_cov_2.842593_g11351_i0", "PRJNA753112", "11693", "397", "2.842593", "11.28509421", "Mycolicibacterium brumae", "85968", "Bacteria", "Bacteria", "49.3", "0.00106", "", "NR", "WP_090587324.1", "85968", "g11351", "i0", "33", "0.755667506297229", "100", "62", "74.8", "3", "327", "31", "809", "904", "WP_090587324.1 arabinosyltransferase domain-containing protein [Mycolicibacterium brumae]", "diamond", "300", "49.3", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Mycobacteriaceae", "Mycolicibacterium", "Mycolicibacterium brumae"], [31538417, "PRJNA753112_P_NODE_28756_length_253_cov_0.866667_g28414_i0", "PRJNA753112", "28756", "253", "0.866667", "2.19266751", "Streptomyces sp. MBT84", "1488414", "Bacteria", "Bacteria", "42.7", "0.0417", "", "NR", "MBW8705193.1", "1488414", "g28414", "i0", "40.3", "0.735177865612648", "62", "34", "73.5", "1", "66", "251", "704", "762", "MBW8705193.1 Cyclic di-GMP phosphodiesterase Gmr [Streptomyces sp. MBT84]", "diamond", "186", "42.7", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces sp. MBT84"], [32592123, "PRJNA753112_P_NODE_17539_length_324_cov_1.657371_g17197_i0", "PRJNA753112", "17539", "324", "1.657371", "5.36988204", "Streptomyces", "1883", "Bacteria", "Bacteria", "56.2", "1.62e-6", "", "NR", "WP_016643678.1", "47760", "g17197", "i0", "52.5", "4.69444444444444", "61", "23", "50.9", "2", "322", "158", "138", "198", "WP_016643678.1 Kelch repeat-containing protein [Streptomyces aurantiacus]", "diamond", "1521", "56.2", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces aurantiacus"], [32644858, "PRJNA753112_P_NODE_26380_length_265_cov_1.625000_g26038_i0", "PRJNA753112", "26380", "265", "1.625", "4.30625", "Acidimicrobiales bacterium", "2201156", "Bacteria", "Bacteria", "77.4", "3.06e-14", "", "NR", "HLN17668.1", "2201156", "g26038", "i0", "68.6", "2.11698113207547", "51", "16", "57.7", "0", "264", "112", "520", "570", "HLN17668.1 amidohydrolase family protein [Acidimicrobiales bacterium]", "diamond", "561", "77.4", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Acidimicrobiia", "Acidimicrobiales", null, null, "Acidimicrobiales bacterium"]], "truncated": false, "filtered_table_rows_count": 12, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA753112", "p2": "Actinomycetota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA753112&tax_phylum=Actinomycetota", "results": [{"value": "PRJNA753112", "label": "PRJNA753112", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA753112&tax_phylum=Actinomycetota", "results": [{"value": "diamond", "label": "diamond", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA753112&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA753112&tax_phylum=Actinomycetota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA753112&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA753112&tax_phylum=Actinomycetota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA753112&tax_phylum=Actinomycetota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA753112&tax_phylum=Actinomycetota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA753112&tax_phylum=Actinomycetota", "results": [{"value": "Actinomycetota", "label": "Actinomycetota", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA753112", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 371.97982699944987}