{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA751877\" and tax_phylum = \"Chordata\"", "rows": [[17304424, "PRJNA751877_P_NODE_2174_length_568_cov_2.424242_g2053_i0", "PRJNA751877", "2174", "568", "2.424242", "13.76969456", "Opisthokonta", "33154", "Chordata", "Chordata", "81.6", "2.23e-16", "", "NR", "CAG5105596.1", "34765", "g2053", "i0", "69.1", "3.21654929577465", "110", "34", "58.1", "0", "21", "350", "1", "110", "CAG5105596.1 Oidioi.mRNA.OKI2018_I69.chr1.g2273.t1.cds [Oikopleura dioica]", "diamond", "1827", "81.6", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Appendicularia", "Copelata", "Oikopleuridae", "Oikopleura", "Oikopleura dioica"], [27115766, "PRJNA751877_P_NODE_7902_length_375_cov_1.019868_g7780_i0", "PRJNA751877", "7902", "375", "1.019868", "3.824505", "Phaenicophaeus curvirostris", "33595", "Chordata", "Chordata", "176", "1.37e-51", "", "NR", "XP_069737843.1", "33595", "g7780", "i0", "66.7", "27.52", "123", "41", "98.4", "0", "373", "5", "128", "250", "XP_069737843.1 cytochrome c1, heme protein, mitochondrial-like [Phaenicophaeus curvirostris]", "diamond", "10320", "176", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Cuculiformes", "Cuculidae", "Phaenicophaeus", "Phaenicophaeus curvirostris"], [27463727, "PRJNA751877_P_NODE_25523_length_247_cov_0.885057_g25401_i0", "PRJNA751877", "25523", "247", "0.885057", "2.18609079", "Peromyscus leucopus", "10041", "Chordata", "Chordata", "47.4", "7.69e-4", "", "NR", "XP_037056799.1", "10041", "g25401", "i0", "60", "1.82186234817814", "50", "20", "60.7", "0", "246", "97", "164", "213", "XP_037056799.1 LOW QUALITY PROTEIN: 40S ribosomal protein S6-like [Peromyscus leucopus]", "diamond", "450", "47.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Cricetidae", "Peromyscus", "Peromyscus leucopus"], [28000565, "PRJNA751877_P_NODE_25105_length_248_cov_0.880000_g24983_i0", "PRJNA751877", "25105", "248", "0.88", "2.1824", "Sciurus carolinensis", "30640", "Chordata", "Chordata", "49.7", "7.87e-5", "", "NR", "MBZ3870293.1", "30640", "g24983", "i0", "50.9", "1.39112903225806", "57", "26", "66.5", "1", "8", "172", "96", "152", "MBZ3870293.1 60S acidic ribosomal protein P2 [Sciurus carolinensis]", "diamond", "345", "49.7", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Sciuridae", "Sciurus", "Sciurus carolinensis"], [28947832, "PRJNA751877_P_NODE_16988_length_284_cov_1.379147_g16866_i0", "PRJNA751877", "16988", "284", "1.379147", "3.91677748", "Ranitomeya imitator", "111125", "Chordata", "Chordata", "76.3", "1.01e-13", "", "NR", "CAJ0964531.1", "111125", "g16866", "i0", "50", "3.08450704225352", "68", "32", "71.8", "1", "3", "206", "759", "824", "CAJ0964531.1 unnamed protein product [Ranitomeya imitator]", "diamond", "876", "76.3", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Dendrobatidae", "Ranitomeya", "Ranitomeya imitator"], [29799970, "PRJNA751877_P_NODE_24731_length_248_cov_0.880000_g24609_i0", "PRJNA751877", "24731", "248", "0.88", "2.1824", "Candoia aspera", "51853", "Chordata", "Chordata", "48.5", "3.63e-4", "", "NR", "XP_063147205.1", "51853", "g24609", "i0", "50", "1.23387096774194", "36", "18", "43.5", "0", "114", "7", "284", "319", "XP_063147205.1 uncharacterized protein LOC134488789 [Candoia aspera]", "diamond", "306", "48.5", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Lepidosauria", "Squamata", "Boidae", "Candoia", "Candoia aspera"], [29841624, "PRJNA751877_P_NODE_6751_length_394_cov_2.398754_g6629_i0", "PRJNA751877", "6751", "394", "2.398754", "9.45109076", "Metazoa", "33208", "Chordata", "Chordata", "56.6", "2.32e-6", "", "NR", "XP_021482117.1", "10047", "g6629", "i0", "35.7", "1.43908629441624", "98", "59", "74.6", "2", "23", "316", "110", "203", "XP_021482117.1 cathepsin 8-like [Meriones unguiculatus]", "diamond", "567", "56.6", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Muridae", "Meriones", "Meriones unguiculatus"], [30337585, "PRJNA751877_P_NODE_19552_length_268_cov_1.287179_g19430_i0", "PRJNA751877", "19552", "268", "1.287179", "3.44963972", "Polypterus senegalus", "55291", "Chordata", "Chordata", "55.5", "1.56e-6", "", "NR", "KAG2468153.1", "55291", "g19430", "i0", "71.4", "1.72388059701493", "35", "10", "39.2", "0", "164", "268", "239", "273", "KAG2468153.1 TC1A transposase, partial [Polypterus senegalus]", "diamond", "462", "55.5", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Cladistia", "Polypteriformes", "Polypteridae", "Polypterus", "Polypterus senegalus"], [31538311, "PRJNA751877_P_NODE_29616_length_242_cov_0.869822_g29494_i0", "PRJNA751877", "29616", "242", "0.869822", "2.10496924", "Xenopus tropicalis", "8364", "Chordata", "Chordata", "52", "1.46e-5", "", "NR", "NP_001005817.1", "8364", "g29494", "i0", "41", "0.966942148760331", "78", "44", "94.2", "1", "2", "229", "18", "95", "NP_001005817.1 oxidoreductase HTATIP2 [Xenopus tropicalis]", "diamond", "234", "52", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Pipidae", "Xenopus", "Xenopus tropicalis"], [32139228, "PRJNA751877_P_NODE_17478_length_281_cov_1.447115_g17356_i0", "PRJNA751877", "17478", "281", "1.447115", "4.06639315", "Erpetoichthys calabaricus", "27687", "Chordata", "Chordata", "53.9", "6.94e-6", "", "NR", "XP_028670689.1", "27687", "g17356", "i0", "35.2", "0.939501779359431", "88", "57", "94", "0", "272", "9", "719", "806", "XP_028670689.1 major vault protein [Erpetoichthys calabaricus]", "diamond", "264", "53.9", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Cladistia", "Polypteriformes", "Polypteridae", "Erpetoichthys", "Erpetoichthys calabaricus"], [32465726, "PRJNA751877_P_NODE_6259_length_404_cov_1.628399_g6137_i0", "PRJNA751877", "6259", "404", "1.628399", "6.57873196", "Branchiostoma", "7737", "Chordata", "Chordata", "85.5", "1.25e-16", "", "NR", "XP_035689996.1", "7739", "g6137", "i0", "66.2", "1.4480198019802", "65", "21", "47.5", "1", "399", "208", "296", "360", "XP_035689996.1 conditioned medium factor receptor 1-like [Branchiostoma floridae]", "diamond", "585", "85.5", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Leptocardii", "Amphioxiformes", "Branchiostomatidae", "Branchiostoma", "Branchiostoma floridae"], [32613549, "PRJNA751877_P_NODE_25220_length_247_cov_1.666667_g25098_i0", "PRJNA751877", "25220", "247", "1.666667", "4.11666749", "Trichechus manatus latirostris", "127582", "Chordata", "Chordata", "43.1", "0.0302", "", "NR", "XP_023587948.1", "127582", "g25098", "i0", "32.9", "0.995951417004049", "82", "54", "98.4", "1", "247", "5", "1445", "1526", "XP_023587948.1 intermembrane lipid transfer protein VPS13D isoform X4 [Trichechus manatus latirostris]", "diamond", "246", "43.1", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Sirenia", "Trichechidae", "Trichechus", "Trichechus manatus"], [32833926, "PRJNA751877_P_NODE_24200_length_249_cov_0.875000_g24078_i0", "PRJNA751877", "24200", "249", "0.875", "2.17875", "Branchiostoma lanceolatum", "7740", "Chordata", "Chordata", "46.2", "0.00239", "", "NR", "XP_066266064.1", "7740", "g24078", "i0", "65.5", "0.349397590361446", "29", "10", "34.9", "0", "3", "89", "11", "39", "XP_066266064.1 protein phosphatase 1 regulatory subunit 12A-like isoform X6 [Branchiostoma lanceolatum]", "diamond", "87", "46.2", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Leptocardii", "Amphioxiformes", "Branchiostomatidae", "Branchiostoma", "Branchiostoma lanceolatum"]], "truncated": false, "filtered_table_rows_count": 13, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA751877", "p2": "Chordata"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA751877&tax_phylum=Chordata", "results": [{"value": "PRJNA751877", "label": "PRJNA751877", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Chordata", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA751877&tax_phylum=Chordata", "results": [{"value": "diamond", "label": "diamond", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA751877&tax_phylum=Chordata", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA751877&tax_phylum=Chordata", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA751877&tax_phylum=Chordata&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA751877&tax_phylum=Chordata", "results": [{"value": "Opisthokonta", "label": "Opisthokonta", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA751877&tax_phylum=Chordata&tax_clade=Opisthokonta", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA751877&tax_phylum=Chordata", "results": [{"value": "Metazoa", "label": "Metazoa", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA751877&tax_phylum=Chordata&tax_kingdom=Metazoa", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA751877&tax_phylum=Chordata", "results": [{"value": "Chordata", "label": "Chordata", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA751877", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 295.4460780019872}