{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA721440\" and tax_phylum = \"Chordata\"", "rows": [[26798830, "PRJNA721440_S_NODE_3281_length_314_cov_5.479245_g3155_i0", "PRJNA721440", "3281", "314", "5.479245", "17.2048293", "Ciona intestinalis", "7719", "Chordata", "Chordata", "74.3", "6.84e-13", "", "NR", "XP_002120963.1", "7719", "g3155", "i0", "62.2", "0.429936305732484", "45", "17", "43", "0", "213", "79", "565", "609", "XP_002120963.1 alpha-amylase 2-like [Ciona intestinalis]", "diamond", "135", "74.3", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Ascidiacea", "Phlebobranchia", "Cionidae", "Ciona", "Ciona intestinalis"], [27178294, "PRJNA721440_S_NODE_12602_length_188_cov_1.122302_g12476_i0", "PRJNA721440", "12602", "188", "1.122302", "2.10992776", "Branchiostoma floridae", "7739", "Chordata", "Chordata", "48.5", "1.62e-4", "", "NR", "XP_035681117.1", "7739", "g12476", "i0", "43.3", "1.91489361702128", "60", "34", "95.7", "0", "187", "8", "13", "72", "XP_035681117.1 cytochrome P450 7B1-like [Branchiostoma floridae]", "diamond", "360", "48.5", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Leptocardii", "Amphioxiformes", "Branchiostomatidae", "Branchiostoma", "Branchiostoma floridae"], [27241633, "PRJNA721440_S_NODE_6743_length_237_cov_1.835106_g6617_i0", "PRJNA721440", "6743", "237", "1.835106", "4.34920122", "Staurois parvus", "386267", "Chordata", "Chordata", "53.5", "7.58e-7", "", "NR", "CAI9557087.1", "386267", "g6617", "i0", "63.9", "0.911392405063291", "36", "11", "43", "1", "43", "144", "24", "59", "CAI9557087.1 unnamed protein product, partial [Staurois parvus]", "diamond", "216", "53.5", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Ranidae", "Staurois", "Staurois parvus"], [27283789, "PRJNA721440_S_NODE_7223_length_231_cov_0.857143_g7097_i0", "PRJNA721440", "7223", "231", "0.857143", "1.98000033", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "52.4", "5.82e-6", "", "NR", "XDB47465.1", "9925", "g7097", "i0", "89.3", "5.50649350649351", "28", "3", "36.4", "0", "3", "86", "159", "186", "XDB47465.1 hypothetical protein ABFV05_001081 [Capra hircus]", "diamond", "1272", "52.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Artiodactyla", "Bovidae", "Capra", "Capra hircus"], [27442042, "PRJNA721440_S_NODE_13543_length_183_cov_1.604478_g13417_i0", "PRJNA721440", "13543", "183", "1.604478", "2.93619474", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "97.1", "1.85e-24", "", "NR", "XP_053557215.1", "8345", "g13417", "i0", "78.3", "3.91803278688525", "60", "13", "98.4", "0", "2", "181", "5", "64", "XP_053557215.1 succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial-like [Bombina bombina]", "diamond", "717", "97.8", "0.992842535787321", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Bombinatoridae", "Bombina", "Bombina bombina"], [28483754, "PRJNA721440_S_NODE_3886_length_293_cov_7.549180_g3760_i0", "PRJNA721440", "3886", "293", "7.54918", "22.1190974", "root", "1", "Root_unresolved", "Root_unresolved", "117", "4.3000000000000004e-30", "", "NR", "XP_051712873.2", "9986", "g3760", "i0", "66.3", "41.518771331058", "95", "28", "95.2", "2", "12", "290", "111", "203", "XP_051712873.2 large ribosomal subunit protein eL22 isoform X2 [Oryctolagus cuniculus]", "diamond", "12165", "117", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Lagomorpha", "Leporidae", "Oryctolagus", "Oryctolagus cuniculus"], [29041772, "PRJNA721440_S_NODE_7288_length_230_cov_1.889503_g7162_i0", "PRJNA721440", "7288", "230", "1.889503", "4.3458569", "Arvicanthis niloticus", "61156", "Chordata", "Chordata", "42.4", "0.0431", "", "NR", "XP_034374341.1", "61156", "g7162", "i0", "36.1", "0.795652173913043", "61", "36", "75.7", "1", "229", "56", "430", "490", "XP_034374341.1 carcinoembryonic antigen-related cell adhesion molecule 20 [Arvicanthis niloticus]", "diamond", "183", "42.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Muridae", "Arvicanthis", "Arvicanthis niloticus"], [29136571, "PRJNA721440_S_NODE_20229_length_160_cov_5.765766_g20103_i0", "PRJNA721440", "20229", "160", "5.765766", "9.2252256", "Columba guinea", "135627", "Chordata", "Chordata", "100", "7.539999999999999e-23", "", "NR", "KAK2511043.1", "135627", "g20103", "i0", "72.6", "3", "62", "8", "99.4", "1", "1", "159", "84", "145", "KAK2511043.1 Copa [Columba guinea]", "diamond", "480", "100", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Columbiformes", "Columbidae", "Columba", "Columba guinea"], [29515001, "PRJNA721440_S_NODE_3770_length_297_cov_2.895161_g3644_i0", "PRJNA721440", "3770", "297", "2.895161", "8.59862817", "Branchiostoma belcheri tsingtauense", "155462", "Chordata", "Chordata", "77", "5.17e-15", "", "NR", "AAM18076.1", "155462", "g3644", "i0", "63.2", "0.575757575757576", "57", "21", "57.6", "0", "296", "126", "130", "186", "AAM18076.1 peroxiredoxin V protein [Branchiostoma belcheri tsingtauense]", "diamond", "171", "77", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Leptocardii", "Amphioxiformes", "Branchiostomatidae", "Branchiostoma", "Branchiostoma belcheri"], [29525768, "PRJNA721440_S_NODE_17550_length_167_cov_3.635593_g17424_i0", "PRJNA721440", "17550", "167", "3.635593", "6.07144031", "Metazoa", "33208", "Chordata", "Chordata", "45.4", "0.0015", "", "NR", "XP_051782102.1", "27687", "g17424", "i0", "55", "3.8622754491018", "40", "18", "71.9", "0", "35", "154", "219", "258", "XP_051782102.1 uncharacterized protein K02A2.6-like [Erpetoichthys calabaricus]", "diamond", "645", "45.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Cladistia", "Polypteriformes", "Polypteridae", "Erpetoichthys", "Erpetoichthys calabaricus"], [29894248, "PRJNA721440_S_NODE_21091_length_156_cov_2.841121_g20965_i0", "PRJNA721440", "21091", "156", "2.841121", "4.43214876", "Amblyraja radiata", "386614", "Chordata", "Chordata", "71.6", "7.19e-13", "", "NR", "XP_032877958.1", "386614", "g20965", "i0", "73.5", "4.73076923076923", "49", "13", "94.2", "0", "5", "151", "431", "479", "XP_032877958.1 LOW QUALITY PROTEIN: uncharacterized protein LOC116973759, partial [Amblyraja radiata]", "diamond", "738", "71.6", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Chondrichthyes", "Rajiformes", "Rajidae", "Amblyraja", "Amblyraja radiata"], [30273525, "PRJNA721440_S_NODE_11112_length_197_cov_2.783784_g10986_i0", "PRJNA721440", "11112", "197", "2.783784", "5.48405448", "Geotrypetes seraphini", "260995", "Chordata", "Chordata", "45.8", "0.00169", "", "NR", "XP_033798662.1", "260995", "g10986", "i0", "46", "3.79187817258883", "63", "34", "95.9", "0", "6", "194", "1009", "1071", "XP_033798662.1 cilia- and flagella-associated protein 43 isoform X1 [Geotrypetes seraphini]", "diamond", "747", "45.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Gymnophiona", "Dermophiidae", "Geotrypetes", "Geotrypetes seraphini"], [30305289, "PRJNA721440_S_NODE_15692_length_173_cov_4.612903_g15566_i0", "PRJNA721440", "15692", "173", "4.612903", "7.98032219", "Styela clava", "7725", "Chordata", "Chordata", "73.6", "3.2e-14", "", "NR", "XP_039273615.1", "7725", "g15566", "i0", "59.6", "0.988439306358382", "57", "23", "98.8", "0", "3", "173", "80", "136", "XP_039273615.1 protein CREG1-like [Styela clava]", "diamond", "171", "73.6", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Ascidiacea", "Stolidobranchia", "Styelidae", "Styela", "Styela clava"], [30747224, "PRJNA721440_S_NODE_6814_length_236_cov_2.181818_g6688_i0", "PRJNA721440", "6814", "236", "2.181818", "5.14909048", "Amblyraja radiata", "386614", "Chordata", "Chordata", "42.4", "0.0456", "", "NR", "XP_032896191.1", "386614", "g6688", "i0", "45.8", "0.610169491525424", "48", "25", "61", "1", "233", "90", "214", "260", "XP_032896191.1 ribosomal L1 domain-containing protein 1 [Amblyraja radiata]", "diamond", "144", "42.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Chondrichthyes", "Rajiformes", "Rajidae", "Amblyraja", "Amblyraja radiata"], [31284267, "PRJNA721440_S_NODE_11855_length_192_cov_3.244755_g11729_i0", "PRJNA721440", "11855", "192", "3.244755", "6.2299296", "Erpetoichthys calabaricus", "27687", "Chordata", "Chordata", "70.5", "2.38e-12", "", "NR", "XP_051791274.1", "27687", "g11729", "i0", "73.5", "3.828125", "49", "12", "75", "1", "171", "28", "156", "204", "XP_051791274.1 E3 SUMO-protein ligase ZBED1-like [Erpetoichthys calabaricus]", "diamond", "735", "70.5", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Cladistia", "Polypteriformes", "Polypteridae", "Erpetoichthys", "Erpetoichthys calabaricus"], [31315985, "PRJNA721440_S_NODE_12395_length_189_cov_1.878571_g12269_i0", "PRJNA721440", "12395", "189", "1.878571", "3.55049919", "Phyllostomus discolor", "89673", "Chordata", "Chordata", "42", "0.0337", "", "NR", "XP_035869557.1", "89673", "g12269", "i0", "48.6", "0.587301587301587", "37", "18", "58.7", "1", "152", "42", "66", "101", "XP_035869557.1 LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase isozyme L5-like [Phyllostomus discolor]", "diamond", "111", "42", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Chiroptera", "Phyllostomidae", "Phyllostomus", "Phyllostomus discolor"], [31569297, "PRJNA721440_S_NODE_12296_length_189_cov_11.628571_g12170_i0", "PRJNA721440", "12296", "189", "11.628571", "21.97799919", "Phallusia mammillata", "59560", "Chordata", "Chordata", "77.4", "9.15e-15", "", "NR", "CAB3252815.1", "59560", "g12170", "i0", "54.8", "2.93650793650794", "62", "28", "98.4", "0", "188", "3", "305", "366", "CAB3252815.1 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial [Phallusia mammillata]", "diamond", "555", "77.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Ascidiacea", "Phlebobranchia", "Ascidiidae", "Phallusia", "Phallusia mammillata"], [31611237, "PRJNA721440_S_NODE_4516_length_277_cov_1.802632_g4390_i0", "PRJNA721440", "4516", "277", "1.802632", "4.99329064", "root", "1", "Root_unresolved", "Root_unresolved", "43.1", "0.0411", "", "NR", "XP_009857558.1", "7719", "g4390", "i0", "33.3", "1.84115523465704", "84", "45", "91", "2", "269", "18", "203", "275", "XP_009857558.1 TBC1 domain family member 9 [Ciona intestinalis]", "diamond", "510", "43.1", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Ascidiacea", "Phlebobranchia", "Cionidae", "Ciona", "Ciona intestinalis"], [31663788, "PRJNA721440_S_NODE_16597_length_170_cov_1.438017_g16471_i0", "PRJNA721440", "16597", "170", "1.438017", "2.4446289", "Ranitomeya imitator", "111125", "Chordata", "Chordata", "47.4", "3.26e-4", "", "NR", "CAJ0941415.1", "111125", "g16471", "i0", "50.9", "1.90588235294118", "55", "27", "97.1", "0", "3", "167", "614", "668", "CAJ0941415.1 unnamed protein product [Ranitomeya imitator]", "diamond", "324", "47.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Dendrobatidae", "Ranitomeya", "Ranitomeya imitator"], [31758782, "PRJNA721440_S_NODE_5817_length_250_cov_8.064677_g5691_i0", "PRJNA721440", "5817", "250", "8.064677", "20.1616925", "Gekko japonicus", "146911", "Chordata", "Chordata", "72", "1.99e-12", "", "NR", "XP_015284848.1", "146911", "g5691", "i0", "66", "1.212", "50", "17", "60", "0", "250", "101", "60", "109", "XP_015284848.1 PREDICTED: thioredoxin reductase 3 isoform X1 [Gekko japonicus]", "diamond", "303", "72", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Lepidosauria", "Squamata", "Gekkonidae", "Gekko", "Gekko japonicus"], [31853615, "PRJNA721440_S_NODE_8037_length_221_cov_30.825581_g7911_i0", "PRJNA721440", "8037", "221", "30.825581", "68.12453401", "Staurois parvus", "386267", "Chordata", "Chordata", "51.6", "1.43e-5", "", "NR", "CAI9536211.1", "386267", "g7911", "i0", "51.8", "2.04977375565611", "56", "20", "66.5", "3", "175", "29", "170", "225", "CAI9536211.1 unnamed protein product [Staurois parvus]", "diamond", "453", "51.6", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Ranidae", "Staurois", "Staurois parvus"], [31885243, "PRJNA721440_S_NODE_10717_length_200_cov_1.331126_g10591_i0", "PRJNA721440", "10717", "200", "1.331126", "2.662252", "Polypterus senegalus", "55291", "Chordata", "Chordata", "47.4", "4.79e-4", "", "NR", "KAG2466651.1", "55291", "g10591", "i0", "61.8", "0.51", "34", "13", "51", "0", "198", "97", "305", "338", "KAG2466651.1 TCB1 transposase, partial [Polypterus senegalus]", "diamond", "102", "47.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Cladistia", "Polypteriformes", "Polypteridae", "Polypterus", "Polypterus senegalus"], [32275703, "PRJNA721440_S_NODE_5838_length_250_cov_2.064677_g5712_i0", "PRJNA721440", "5838", "250", "2.064677", "5.1616925", "Chordata", "7711", "Chordata", "Chordata", "43.5", "0.0185", "", "NR", "XP_035676453.1", "7739", "g5712", "i0", "31.3", "2.352", "64", "40", "75.6", "2", "3", "191", "181", "241", "XP_035676453.1 cyclin-Q-like isoform X2 [Branchiostoma floridae]", "diamond", "588", "43.5", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Leptocardii", "Amphioxiformes", "Branchiostomatidae", "Branchiostoma", "Branchiostoma floridae"], [32486681, "PRJNA721440_S_NODE_14019_length_181_cov_1.075758_g13893_i0", "PRJNA721440", "14019", "181", "1.075758", "1.94712198", "Athene cunicularia", "194338", "Chordata", "Chordata", "43.9", "0.00661", "", "NR", "XP_026702274.1", "194338", "g13893", "i0", "34.5", "1.92265193370166", "58", "33", "87.8", "2", "1", "159", "1446", "1503", "XP_026702274.1 cullin-9 isoform X5 [Athene cunicularia]", "diamond", "348", "43.9", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Strigiformes", "Strigidae", "Athene", "Athene cunicularia"], [32780532, "PRJNA721440_S_NODE_7480_length_228_cov_1.351955_g7354_i0", "PRJNA721440", "7480", "228", "1.351955", "3.0824574", "Metazoa", "33208", "Chordata", "Chordata", "47", "9.52e-4", "", "NR", "XP_069787031.1", "1343680", "g7354", "i0", "39.1", "4.52631578947368", "69", "42", "90.8", "0", "212", "6", "200", "268", "XP_069787031.1 ribosomal oxygenase 1 isoform X6 [Narcine bancroftii]", "diamond", "1032", "47", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Chondrichthyes", "Torpediniformes", "Narcinidae", "Narcine", "Narcine bancroftii"]], "truncated": false, "filtered_table_rows_count": 25, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA721440", "p2": "Chordata"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA721440&tax_phylum=Chordata", "results": [{"value": "PRJNA721440", "label": "PRJNA721440", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Chordata", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA721440&tax_phylum=Chordata", "results": [{"value": "diamond", "label": "diamond", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA721440&tax_phylum=Chordata", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA721440&tax_phylum=Chordata", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA721440&tax_phylum=Chordata&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA721440&tax_phylum=Chordata", "results": [{"value": "Opisthokonta", "label": "Opisthokonta", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA721440&tax_phylum=Chordata&tax_clade=Opisthokonta", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA721440&tax_phylum=Chordata", "results": [{"value": "Metazoa", "label": "Metazoa", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA721440&tax_phylum=Chordata&tax_kingdom=Metazoa", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA721440&tax_phylum=Chordata", "results": [{"value": "Chordata", "label": "Chordata", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA721440", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 388.8760649970209}