{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA702290\" and tax_phylum = \"Pseudomonadota\"", "rows": [[26987730, "PRJNA702290_P_NODE_662_length_191_cov_17.559211_g654_i0", "PRJNA702290", "662", "191", "17.559211", "33.53809301", "uncultured Novosphingobium sp.", "292277", "Bacteria", "Bacteria", "43.1", "0.00489", "", "NR", "WP_394659905.1", "292277", "g654", "i0", "77.3", "0.345549738219895", "22", "5", "34.6", "0", "77", "12", "78", "99", "WP_394659905.1 hypothetical protein [uncultured Novosphingobium sp.]", "diamond", "66", "43.1", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Alphaproteobacteria", "Sphingomonadales", "Sphingomonadaceae", "Novosphingobium", "uncultured Novosphingobium sp."], [28388737, "PRJNA702290_P_NODE_1646_length_158_cov_15.705882_g1638_i0", "PRJNA702290", "1646", "158", "15.705882", "24.81529356", "Polynucleobacter", "44013", "Bacteria", "Bacteria", "53.9", "1.59e-7", "", "NR", "WP_216229829.1", "2689099", "g1638", "i0", "92.6", "1.0253164556962", "27", "2", "51.3", "0", "2", "82", "35", "61", "WP_216229829.1 hypothetical protein [Polynucleobacter sp. 78F-HAINBA]", "diamond", "162", "53.9", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Burkholderiaceae", "Polynucleobacter", "Polynucleobacter sp. 78F-HAINBA"], [28724990, "PRJNA702290_P_NODE_2107_length_151_cov_7.669643_g2099_i0", "PRJNA702290", "2107", "151", "7.669643", "11.58116093", "Roseateles cellulosilyticus", "2906762", "Bacteria", "Bacteria", "83.6", "4.34e-17", "", "NR", "WP_233372837.1", "2906762", "g2099", "i0", "78.2", "2.20529801324503", "55", "3", "91.4", "1", "4", "141", "1704", "1758", "WP_233372837.1 CARDB domain-containing protein [Roseateles cellulosilyticus]", "diamond", "333", "83.6", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Sphaerotilaceae", "Roseateles", "Pelomonas cellulosilytica"], [29861664, "PRJNA702290_P_NODE_1471_length_161_cov_10.377049_g1463_i0", "PRJNA702290", "1471", "161", "10.377049", "16.70704889", "Methylibium sp.", "2067992", "Bacteria", "Bacteria", "49.3", "5.7e-5", "", "NR", "MBA4218745.1", "2067992", "g1463", "i0", "61.4", "0.819875776397516", "44", "16", "82", "1", "6", "137", "2", "44", "MBA4218745.1 hypothetical protein [Methylibium sp.]", "diamond", "132", "49.3", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Sphaerotilaceae", "Methylibium", "Methylibium sp."], [30462361, "PRJNA702290_P_NODE_1713_length_158_cov_5.739496_g1705_i0", "PRJNA702290", "1713", "158", "5.739496", "9.06840368", "Haemophilus sputorum", "1078480", "Bacteria", "Bacteria", "90.1", "4.61e-20", "", "NR", "WP_007526604.1", "1078480", "g1705", "i0", "85.2", "1.0253164556962", "54", "0", "87.3", "1", "8", "145", "237", "290", "WP_007526604.1 SAM-dependent methyltransferase TehB [Haemophilus sputorum]", "diamond", "162", "90.1", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Pasteurellales", "Pasteurellaceae", "Haemophilus", "Haemophilus sputorum"], [30904374, "PRJNA702290_P_NODE_1174_length_191_cov_3.967105_g1166_i0", "PRJNA702290", "1174", "191", "3.967105", "7.57717055", "Alphaproteobacteria bacterium", "1913988", "Bacteria", "Bacteria", "42", "0.00373", "", "NR", "MBM3623255.1", "1913988", "g1166", "i0", "92.3", "1.22513089005236", "26", "2", "40.8", "0", "114", "191", "24", "49", "MBM3623255.1 Flp family type IVb pilin [Alphaproteobacteria bacterium]", "diamond", "234", "42", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Alphaproteobacteria", null, null, null, "Alphaproteobacteria bacterium"], [31125054, "PRJNA702290_P_NODE_1215_length_191_cov_2.868421_g1207_i0", "PRJNA702290", "1215", "191", "2.868421", "5.47868411", "Ramlibacter sp. AN1133", "3133429", "Bacteria", "Bacteria", "48.5", "4.34e-5", "", "NR", "WP_340354051.1", "3133429", "g1207", "i0", "39.7", "1.22513089005236", "78", "27", "92.7", "2", "8", "184", "10", "86", "WP_340354051.1 DUF485 domain-containing protein [Ramlibacter sp. AN1133]", "diamond", "234", "48.5", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Comamonadaceae", "Ramlibacter", "Ramlibacter sp. AN1133"], [31947574, "PRJNA702290_P_NODE_1157_length_191_cov_4.190789_g1149_i0", "PRJNA702290", "1157", "191", "4.190789", "8.00440699", "Acinetobacter sp.", "472", "Bacteria", "Bacteria", "48.9", "1.13e-4", "", "NR", "HQZ60399.1", "472", "g1149", "i0", "76", "0.392670157068063", "25", "6", "39.3", "0", "188", "114", "178", "202", "HQZ60399.1 hypothetical protein [Acinetobacter sp.]", "diamond", "75", "48.9", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Moraxellales", "Moraxellaceae", "Acinetobacter", "Acinetobacter sp."], [32863850, "PRJNA702290_P_NODE_840_length_191_cov_11.822368_g832_i0", "PRJNA702290", "840", "191", "11.822368", "22.58072288", "Roseateles sp.", "1971397", "Bacteria", "Bacteria", "60.8", "7.53e-9", "", "NR", "WP_373714789.1", "1971397", "g832", "i0", "100", "0.753926701570681", "24", "0", "37.7", "0", "115", "186", "328", "351", "WP_373714789.1 exosortase A [Roseateles sp.]", "diamond", "144", "60.8", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Sphaerotilaceae", "Roseateles", "Roseateles sp."]], "truncated": false, "filtered_table_rows_count": 9, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA702290", "p2": "Pseudomonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA702290&tax_phylum=Pseudomonadota", "results": [{"value": "PRJNA702290", "label": "PRJNA702290", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Pseudomonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA702290&tax_phylum=Pseudomonadota", "results": [{"value": "diamond", "label": "diamond", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA702290&tax_phylum=Pseudomonadota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA702290&tax_phylum=Pseudomonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA702290&tax_phylum=Pseudomonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA702290&tax_phylum=Pseudomonadota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA702290&tax_phylum=Pseudomonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA702290&tax_phylum=Pseudomonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA702290&tax_phylum=Pseudomonadota", "results": [{"value": "Pseudomonadota", "label": "Pseudomonadota", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA702290", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 198.63612001063302}