{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA698538\" and tax_phylum = \"Campylobacterota\"", "rows": [[29356453, "PRJNA698538_S_NODE_8749_length_361_cov_3.208333_g8583_i0", "PRJNA698538", "8749", "361", "3.208333", "11.58208213", "Aliarcobacter cryaerophilus", "28198", "Bacteria", "Bacteria", "97.8", "2.92e-21", "", "NR", "WP_260962730.1", "28198", "g8583", "i0", "48.2", "1.82825484764543", "110", "50", "86.4", "4", "317", "6", "217", "325", "WP_260962730.1 TaqI-like C-terminal specificity domain-containing protein [Aliarcobacter cryaerophilus]", "diamond", "660", "97.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", "Aliarcobacter", "Aliarcobacter cryaerophilus"], [29514074, "PRJNA698538_S_NODE_24670_length_260_cov_1.647059_g24504_i0", "PRJNA698538", "24670", "260", "1.647059", "4.2823534", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "47.4", "9.47e-5", "", "NR", "GAA8807851.1", "210", "g24504", "i0", "69.7", "0.761538461538461", "33", "10", "38.1", "0", "162", "64", "25", "57", "GAA8807851.1 hypothetical protein Kyoto149A_2760 [Helicobacter pylori]", "diamond", "198", "47.4", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30082536, "PRJNA698538_S_NODE_2332_length_503_cov_2.406977_g2166_i0", "PRJNA698538", "2332", "503", "2.406977", "12.10709431", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "90.1", "1.1e-19", "", "NR", "GAA9248560.1", "210", "g2166", "i0", "58.7", "2.43936381709742", "75", "31", "44.7", "0", "234", "10", "25", "99", "GAA9248560.1 hypothetical protein Kyoto199A_1460 [Helicobacter pylori]", "diamond", "1227", "90.1", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30525018, "PRJNA698538_S_NODE_21473_length_276_cov_1.418719_g21307_i0", "PRJNA698538", "21473", "276", "1.418719", "3.91566444", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "43.5", "0.00225", "", "NR", "GAA9068008.1", "210", "g21307", "i0", "47.5", "0.434782608695652", "40", "20", "42.4", "1", "72", "188", "2", "41", "GAA9068008.1 hypothetical protein Kyoto184A_06030 [Helicobacter pylori]", "diamond", "120", "43.5", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [31409992, "PRJNA698538_S_NODE_25256_length_257_cov_2.625000_g25090_i0", "PRJNA698538", "25256", "257", "2.625", "6.74625", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "51.2", "5.43e-6", "", "NR", "GAA8795331.1", "210", "g25090", "i0", "61.4", "0.817120622568093", "70", "17", "74.7", "5", "206", "15", "2", "67", "GAA8795331.1 hypothetical protein Kyoto149A_0020 [Helicobacter pylori]", "diamond", "210", "51.2", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [31662805, "PRJNA698538_S_NODE_29297_length_243_cov_1.358824_g29131_i0", "PRJNA698538", "29297", "243", "1.358824", "3.30194232", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "45.1", "0.0014", "", "NR", "GAA8425757.1", "210", "g29131", "i0", "58.5", "0.506172839506173", "41", "17", "50.6", "0", "142", "20", "62", "102", "GAA8425757.1 hypothetical protein Hpkin77_14910 [Helicobacter pylori]", "diamond", "123", "45.1", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32137571, "PRJNA698538_S_NODE_25798_length_255_cov_1.269231_g25632_i0", "PRJNA698538", "25798", "255", "1.269231", "3.23653905", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "43.1", "0.00412", "", "NR", "GAA8950436.1", "210", "g25632", "i0", "38.5", "1.54117647058824", "65", "40", "76.5", "0", "250", "56", "1", "65", "GAA8950436.1 hypothetical protein Kyoto181A_1530 [Helicobacter pylori]", "diamond", "393", "43.1", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"]], "truncated": false, "filtered_table_rows_count": 7, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA698538", "p2": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA698538&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA698538", "label": "PRJNA698538", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA698538&tax_phylum=Campylobacterota", "results": [{"value": "diamond", "label": "diamond", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA698538&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA698538&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA698538&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA698538&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA698538&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA698538&tax_phylum=Campylobacterota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA698538&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA698538", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 210.5711589974817}