{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA688736\" and tax_phylum = \"Actinomycetota\"", "rows": [[5771555, "PRJNA688736_P_NODE_38565_length_257_cov_1.309783_g38280_i0", "PRJNA688736", "38565", "257", "1.309783", "3.36614231", "Actinomycetales bacterium", "1911520", "Bacteria", "Bacteria", "114", "3.22e-30", "", "NR", "NLI17885.1", "1911520", "g38280", "i0", "78.9", "1.68093385214008", "71", "15", "82.9", "0", "1", "213", "73", "143", "NLI17885.1 PH domain-containing protein [Actinomycetales bacterium]", "diamond", "432", "114", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Actinomycetales", null, null, "Actinomycetales bacterium"], [26765791, "PRJNA688736_P_NODE_34781_length_272_cov_1.090452_g34496_i0", "PRJNA688736", "34781", "272", "1.090452", "2.96602944", "Catellatospora sp. TT", "54104", "Bacteria", "Bacteria", "42.7", "0.0451", "", "NR", "WP_212830149.1", "2733863", "g34496", "i0", "34.5", "0.926470588235294", "84", "46", "87.1", "4", "257", "21", "8", "87", "WP_212830149.1 hypothetical protein [Catellatospora sp. TT07R-123]", "diamond", "252", "42.7", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micromonosporales", "Micromonosporaceae", "Catellatospora", "Catellatospora sp. TT07R-123"], [27682837, "PRJNA688736_P_NODE_44104_length_249_cov_0.886364_g43819_i0", "PRJNA688736", "44104", "249", "0.886364", "2.20704636", "unclassified Rhodococcus (in: high G+C Gram-positive bacteria)", "192944", "Bacteria", "Bacteria", "154", "2.27e-41", "", "NR", "WP_094638973.1", "192944", "g43819", "i0", "96.3", "0.987951807228916", "82", "3", "98.8", "0", "248", "3", "122", "203", "WP_094638973.1 MULTISPECIES: LuxR C-terminal-related transcriptional regulator [unclassified Rhodococcus (in: high G+C Gram-positive bacteria)]", "diamond", "246", "154", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Nocardiaceae", "Rhodococcus", null], [27966590, "PRJNA688736_P_NODE_39225_length_255_cov_1.010989_g38940_i0", "PRJNA688736", "39225", "255", "1.010989", "2.57802195", "Arthrobacter citreus", "1670", "Bacteria", "Bacteria", "59.3", "4.88e-8", "", "NR", "WP_376934700.1", "1670", "g38940", "i0", "100", "0.329411764705882", "28", "0", "32.9", "0", "1", "84", "259", "286", "WP_376934700.1 hypothetical protein [Arthrobacter citreus]", "diamond", "84", "59.3", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Micrococcaceae", "Arthrobacter", "Arthrobacter citreus"], [29481923, "PRJNA688736_P_NODE_910_length_1293_cov_43.992623_g790_i0", "PRJNA688736", "910", "1293", "43.992623", "568.82461539", "Arthrobacter citreus", "1670", "Bacteria", "Bacteria", "539", "2.2399999999999998e-190", "", "NR", "WP_376934700.1", "1670", "g790", "i0", "100", "0.663573085846868", "286", "0", "66.4", "0", "228", "1085", "1", "286", "WP_376934700.1 hypothetical protein [Arthrobacter citreus]", "diamond", "858", "539", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Micrococcaceae", "Arthrobacter", "Arthrobacter citreus"], [30145150, "PRJNA688736_P_NODE_42012_length_251_cov_0.876404_g41727_i0", "PRJNA688736", "42012", "251", "0.876404", "2.19977404", "Actinomycetota bacterium", "2900548", "Bacteria", "Bacteria", "113", "6.870000000000001e-27", "", "NR", "MDQ3894990.1", "2900548", "g41727", "i0", "67.5", "0.99203187250996006", "83", "26", "99.2", "1", "251", "3", "254", "335", "MDQ3894990.1 beta-propeller fold lactonase family protein [Actinomycetota bacterium]", "diamond", "249", "113", "1", "Bacteria", null, "Bacillati", "Actinomycetota", null, null, null, null, "Actinomycetota bacterium"], [30998597, "PRJNA688736_P_NODE_94_length_2271_cov_12.526388_g77_i0", "PRJNA688736", "94", "2271", "12.526388", "284.47427148", "Arthrobacter citreus", "1670", "Bacteria", "Bacteria", "176", "1.69e-48", "", "NR", "WP_376934692.1", "1670", "g77", "i0", "100", "0.121532364597094", "92", "0", "12.2", "0", "697", "422", "1", "92", "WP_376934692.1 hypothetical protein, partial [Arthrobacter citreus]", "diamond", "276", "176", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Micrococcaceae", "Arthrobacter", "Arthrobacter citreus"], [31156179, "PRJNA688736_P_NODE_75_length_2358_cov_20.123851_g64_i0", "PRJNA688736", "75", "2358", "20.123851", "474.52040658", "Arthrobacter citreus", "1670", "Bacteria", "Bacteria", "823", "9.05e-295", "", "NR", "WP_376934698.1", "1670", "g64", "i0", "100", "0.517811704834606", "407", "0", "51.8", "0", "1010", "2230", "1", "407", "WP_376934698.1 hypothetical protein, partial [Arthrobacter citreus]", "diamond", "1221", "823", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Micrococcaceae", "Arthrobacter", "Arthrobacter citreus"], [31852192, "PRJNA688736_P_NODE_7357_length_542_cov_2.515991_g7075_i0", "PRJNA688736", "7357", "542", "2.515991", "13.63667122", "Arthrobacter citreus", "1670", "Bacteria", "Bacteria", "79.7", "3.23e-14", "", "NR", "WP_376934700.1", "1670", "g7075", "i0", "36.3", "0.808118081180812", "146", "90", "80.3", "2", "507", "73", "117", "260", "WP_376934700.1 hypothetical protein [Arthrobacter citreus]", "diamond", "438", "79.7", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Micrococcaceae", "Arthrobacter", "Arthrobacter citreus"], [32073811, "PRJNA688736_P_NODE_45858_length_247_cov_0.896552_g45573_i0", "PRJNA688736", "45858", "247", "0.896552", "2.21448344", "Lancefieldella parvula", "1382", "Bacteria", "Bacteria", "159", "1.15e-43", "", "NR", "WP_314950448.1", "1382", "g45573", "i0", "92.7", "2.98785425101215", "82", "6", "99.6", "0", "2", "247", "42", "123", "WP_314950448.1 class I SAM-dependent DNA methyltransferase [Lancefieldella parvula]", "diamond", "738", "159", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Coriobacteriia", "Coriobacteriales", "Atopobiaceae", "Lancefieldella", "Lancefieldella parvula"], [32496841, "PRJNA688736_P_NODE_50019_length_243_cov_0.917647_g49734_i0", "PRJNA688736", "50019", "243", "0.917647", "2.22988221", "root", "1", "Root_unresolved", "Root_unresolved", "90.9", "8.200000000000001e-22", "", "NR", "WP_285164290.1", "1773", "g49734", "i0", "62.7", "19.1604938271605", "75", "27", "91.4", "1", "224", "3", "15", "89", "WP_285164290.1 glutathione S-transferase N-terminal domain-containing protein, partial [Mycobacterium tuberculosis]", "diamond", "4656", "91.7", "0.991275899672846", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Mycobacteriaceae", "Mycobacterium", "Mycobacterium tuberculosis"]], "truncated": false, "filtered_table_rows_count": 11, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA688736", "p2": "Actinomycetota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA688736&tax_phylum=Actinomycetota", "results": [{"value": "PRJNA688736", "label": "PRJNA688736", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA688736&tax_phylum=Actinomycetota", "results": [{"value": "diamond", "label": "diamond", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA688736&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA688736&tax_phylum=Actinomycetota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA688736&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA688736&tax_phylum=Actinomycetota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA688736&tax_phylum=Actinomycetota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA688736&tax_phylum=Actinomycetota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA688736&tax_phylum=Actinomycetota", "results": [{"value": "Actinomycetota", "label": "Actinomycetota", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA688736", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 365.97647599774064}