{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA640350\" and tax_phylum = \"Campylobacterota\"", "rows": [[28988497, "PRJNA640350_P_NODE_24288_length_193_cov_28.902439_g24127_i0", "PRJNA640350", "24288", "193", "28.902439", "55.78170727", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "44.3", "0.00157", "", "NR", "GAA9176272.1", "210", "g24127", "i0", "73.9", "2.39378238341969", "23", "6", "35.8", "0", "193", "125", "7", "29", "GAA9176272.1 hypothetical protein Kyoto193A_0470 [Helicobacter pylori]", "diamond", "462", "44.3", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [29606906, "PRJNA640350_P_NODE_37410_length_156_cov_2.173228_g37249_i0", "PRJNA640350", "37410", "156", "2.173228", "3.39023568", "Campylobacter jejuni", "197", "Bacteria", "Bacteria", "41.6", "0.00759", "", "NR", "WP_215425550.1", "197", "g37249", "i0", "84.2", "0.769230769230769", "19", "3", "36.5", "0", "58", "114", "1", "19", "WP_215425550.1 hypothetical protein, partial [Campylobacter jejuni]", "diamond", "120", "41.6", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter jejuni"], [29904041, "PRJNA640350_P_NODE_31311_length_169_cov_1.935714_g31150_i0", "PRJNA640350", "31311", "169", "1.935714", "3.27135666", "Campylobacter", "194", "Bacteria", "Bacteria", "106", "1.1e-25", "", "NR", "WP_304346457.1", "204", "g31150", "i0", "98.2", "1.98816568047337", "56", "1", "99.4", "0", "169", "2", "136", "191", "WP_304346457.1 type VI secretion system domain-containing protein, partial [Campylobacter showae]", "diamond", "336", "107", "0.990654205607477", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter showae"], [30523321, "PRJNA640350_P_NODE_93_length_1658_cov_4.082259_g72_i0", "PRJNA640350", "93", "1658", "4.082259", "67.68385422", "Campylobacter jejuni", "197", "Bacteria", "Bacteria", "481", "1.4499999999999999e-164", "", "NR", "ECO5635035.1", "197", "g72", "i0", "73.8", "0.627864897466827", "347", "85", "62.1", "5", "167", "1195", "1", "345", "ECO5635035.1 tyrosine-type recombinase/integrase [Campylobacter jejuni]", "diamond", "1041", "481", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter jejuni"]], "truncated": false, "filtered_table_rows_count": 4, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA640350", "p2": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA640350&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA640350", "label": "PRJNA640350", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA640350&tax_phylum=Campylobacterota", "results": [{"value": "diamond", "label": "diamond", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA640350&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA640350&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA640350&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA640350&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA640350&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA640350&tax_phylum=Campylobacterota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA640350&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA640350", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 233.26823000388686}