{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA635397\" and tax_phylum = \"Bacillariophyta\"", "rows": [[4433628, "PRJNA635397_P_NODE_3884_length_1001_cov_11.760776_g3544_i0", "PRJNA635397", "3884", "1001", "11.760776", "117.72536776", "Phaeodactylum tricornutum CCAP 1", "2850", "SAR_Eukaryotes", "SAR_Eukaryotes", "350", "1.8299999999999998e-118", "", "NR", "XP_002181180.1", "556484", "g3544", "i0", "79.2", "6.03596403596404", "212", "44", "63.5", "0", "47", "682", "6", "217", "XP_002181180.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]", "diamond", "6042", "350", "1", "Eukaryota", "Sar", null, "Bacillariophyta", "Bacillariophyceae", "Naviculales", "Phaeodactylaceae", "Phaeodactylum", "Phaeodactylum tricornutum"], [12085023, "PRJNA635397_P_NODE_21370_length_348_cov_1.043636_g20916_i0", "PRJNA635397", "21370", "348", "1.043636", "3.63185328", "Bacillariophyta", "2836", "SAR_Eukaryotes", "SAR_Eukaryotes", "98.6", "1.1e-21", "", "NR", "XP_002291609.1", "296543", "g20916", "i0", "72.6", "1.96551724137931", "113", "30", "96.6", "1", "12", "347", "239", "351", "XP_002291609.1 calreticulin-like protein, partial [Thalassiosira pseudonana CCMP1335]", "diamond", "684", "98.6", "1", "Eukaryota", "Sar", null, "Bacillariophyta", "Coscinodiscophyceae", "Thalassiosirales", "Thalassiosiraceae", "Thalassiosira", "Thalassiosira pseudonana"], [13360188, "PRJNA635397_P_NODE_4791_length_885_cov_2.317734_g4414_i0", "PRJNA635397", "4791", "885", "2.317734", "20.5119459", "Cyclotella", "29203", "SAR_Eukaryotes", "SAR_Eukaryotes", "257", "5.280000000000001e-77", "", "NR", "KAL3788351.1", "29204", "g4414", "i0", "63.2", "3.22033898305085", "190", "69", "64.1", "1", "11", "577", "478", "667", "KAL3788351.1 hypothetical protein HJC23_009157 [Cyclotella cryptica]", "diamond", "2850", "257", "1", "Eukaryota", "Sar", null, "Bacillariophyta", "Coscinodiscophyceae", "Stephanodiscales", "Stephanodiscaceae", "Cyclotella", "Cyclotella cryptica"], [14634521, "PRJNA635397_P_NODE_22352_length_340_cov_0.943820_g21898_i0", "PRJNA635397", "22352", "340", "0.94382", "3.208988", "Bacillariophyta", "2836", "SAR_Eukaryotes", "SAR_Eukaryotes", "226", "9.07e-67", "", "NR", "KAI2512956.1", "210448", "g21898", "i0", "96.4", "88.9323529411765", "112", "4", "98.8", "0", "3", "338", "453", "564", "KAI2512956.1 Aconitate B N-terminal domain [Fragilaria crotonensis]", "diamond", "30237", "226", "1", "Eukaryota", "Sar", null, "Bacillariophyta", "Fragilariophyceae", "Fragilariales", "Fragilariaceae", "Fragilaria", "Fragilaria crotonensis"], [26700941, "PRJNA635397_P_NODE_35321_length_266_cov_2.082902_g34867_i0", "PRJNA635397", "35321", "266", "2.082902", "5.54051932", "Cylindrotheca closterium", "2856", "SAR_Eukaryotes", "SAR_Eukaryotes", "47.4", "0.00107", "", "NR", "CAJ1931782.1", "2856", "g34867", "i0", "36.5", "2.66165413533835", "63", "38", "68.8", "1", "80", "262", "193", "255", "CAJ1931782.1 unnamed protein product [Cylindrotheca closterium]", "diamond", "708", "47.4", "1", "Eukaryota", "Sar", null, "Bacillariophyta", "Bacillariophyceae", "Bacillariales", "Bacillariaceae", "Cylindrotheca", "Cylindrotheca closterium"], [27333994, "PRJNA635397_P_NODE_8783_length_603_cov_2.520755_g8336_i0", "PRJNA635397", "8783", "603", "2.520755", "15.20015265", "Seminavis robusta", "568900", "SAR_Eukaryotes", "SAR_Eukaryotes", "93.6", "2.51e-18", "", "NR", "CAB9513310.1", "568900", "g8336", "i0", "36.6", "1.85074626865672", "194", "112", "94.5", "4", "30", "599", "93", "279", "CAB9513310.1 expressed unknown protein [Seminavis robusta]", "diamond", "1116", "93.6", "1", "Eukaryota", "Sar", null, "Bacillariophyta", "Bacillariophyceae", "Naviculales", "Naviculaceae", "Seminavis", "Seminavis robusta"], [27409730, "PRJNA635397_P_NODE_38003_length_256_cov_1.562842_g37549_i0", "PRJNA635397", "38003", "256", "1.562842", "4.00087552", "Bacillariophyceae", "33849", "SAR_Eukaryotes", "SAR_Eukaryotes", "130", "4.44e-33", "", "NR", "XP_002182131.1", "556484", "g37549", "i0", "75.6", "5.7890625", "82", "20", "96.1", "0", "9", "254", "863", "944", "XP_002182131.1 2-oxoglutarate dehydrogenase E1 component [Phaeodactylum tricornutum CCAP 1055/1]", "diamond", "1482", "131", "0.99236641221374", "Eukaryota", "Sar", null, "Bacillariophyta", "Bacillariophyceae", "Naviculales", "Phaeodactylaceae", "Phaeodactylum", "Phaeodactylum tricornutum"], [27535901, "PRJNA635397_P_NODE_48063_length_228_cov_2.006452_g47609_i0", "PRJNA635397", "48063", "228", "2.006452", "4.57471056", "root", "1", "Root_unresolved", "Root_unresolved", "117", "2.1e-28", "", "NR", "CAJ1955267.1", "2856", "g47609", "i0", "69.3", "22.5394736842105", "75", "23", "98.7", "0", "227", "3", "389", "463", "CAJ1955267.1 unnamed protein product [Cylindrotheca closterium]", "diamond", "5139", "118", "0.991525423728814", "Eukaryota", "Sar", null, "Bacillariophyta", "Bacillariophyceae", "Bacillariales", "Bacillariaceae", "Cylindrotheca", "Cylindrotheca closterium"], [27586538, "PRJNA635397_P_NODE_32084_length_280_cov_1.903382_g31630_i0", "PRJNA635397", "32084", "280", "1.903382", "5.3294696", "Fistulifera solaris", "1519565", "SAR_Eukaryotes", "SAR_Eukaryotes", "53.5", "8.98e-6", "", "NR", "GAX18081.1", "1519565", "g31630", "i0", "37.3", "1.77857142857143", "83", "44", "88.9", "1", "3", "251", "549", "623", "GAX18081.1 two-component system, chemotaxis family, sensor kinase CheA [Fistulifera solaris]", "diamond", "498", "53.5", "1", "Eukaryota", "Sar", null, "Bacillariophyta", "Bacillariophyceae", "Naviculales", "Naviculaceae", "Fistulifera", "Fistulifera solaris"], [28091590, "PRJNA635397_P_NODE_26585_length_309_cov_1.881356_g26131_i0", "PRJNA635397", "26585", "309", "1.881356", "5.81339004", "Thalassiosira pseudonana CCMP1335", "296543", "SAR_Eukaryotes", "SAR_Eukaryotes", "125", "1.19e-31", "", "NR", "XP_002286538.1", "296543", "g26131", "i0", "60.6", "0.912621359223301", "94", "37", "91.3", "0", "3", "284", "199", "292", "XP_002286538.1 hypothetical protein THAPSDRAFT_31021, partial [Thalassiosira pseudonana CCMP1335]", "diamond", "282", "125", "1", "Eukaryota", "Sar", null, "Bacillariophyta", "Coscinodiscophyceae", "Thalassiosirales", "Thalassiosiraceae", "Thalassiosira", "Thalassiosira pseudonana"], [28407440, "PRJNA635397_P_NODE_39366_length_252_cov_1.340782_g38912_i0", "PRJNA635397", "39366", "252", "1.340782", "3.37877064", "Stephanodiscus triporus", "2934178", "SAR_Eukaryotes", "SAR_Eukaryotes", "106", "1.39e-26", "", "NR", "KAL3771302.1", "2934178", "g38912", "i0", "65.8", "2.8452380952381", "79", "27", "94", "0", "238", "2", "15", "93", "KAL3771302.1 LOW QUALITY PROTEIN: hypothetical protein ACHAW5_004511 [Stephanodiscus triporus]", "diamond", "717", "106", "1", "Eukaryota", "Sar", null, "Bacillariophyta", "Coscinodiscophyceae", "Stephanodiscales", "Stephanodiscaceae", "Stephanodiscus", "Stephanodiscus triporus"], [28439111, "PRJNA635397_P_NODE_34066_length_271_cov_2.151515_g33612_i0", "PRJNA635397", "34066", "271", "2.151515", "5.83060565", "Thalassiosira pseudonana CCMP1335", "296543", "SAR_Eukaryotes", "SAR_Eukaryotes", "86.3", "3.61e-19", "", "NR", "XP_002292856.1", "296543", "g33612", "i0", "56.7", "0.74169741697417", "67", "29", "74.2", "0", "2", "202", "78", "144", "XP_002292856.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]", "diamond", "201", "86.3", "1", "Eukaryota", "Sar", null, "Bacillariophyta", "Coscinodiscophyceae", "Thalassiosirales", "Thalassiosiraceae", "Thalassiosira", "Thalassiosira pseudonana"], [29575408, "PRJNA635397_P_NODE_38550_length_254_cov_1.685083_g38096_i0", "PRJNA635397", "38550", "254", "1.685083", "4.28011082", "Fistulifera solaris", "1519565", "SAR_Eukaryotes", "SAR_Eukaryotes", "54.3", "7.13e-7", "", "NR", "GAX27651.1", "1519565", "g38096", "i0", "74.2", "0.366141732283465", "31", "8", "36.6", "0", "162", "254", "2", "32", "GAX27651.1 hypothetical protein FisN_13Hh257 [Fistulifera solaris]", "diamond", "93", "54.3", "1", "Eukaryota", "Sar", null, "Bacillariophyta", "Bacillariophyceae", "Naviculales", "Naviculaceae", "Fistulifera", "Fistulifera solaris"], [31262554, "PRJNA635397_P_NODE_19455_length_366_cov_3.344710_g19001_i0", "PRJNA635397", "19455", "366", "3.34471", "12.2416386", "Bacillariophyta", "2836", "SAR_Eukaryotes", "SAR_Eukaryotes", "242", "2.39e-79", "", "NR", "CAJ1953473.1", "2856", "g19001", "i0", "90.8", "4.87704918032787", "119", "11", "97.5", "0", "364", "8", "98", "216", "CAJ1953473.1 unnamed protein product [Cylindrotheca closterium]", "diamond", "1785", "242", "1", "Eukaryota", "Sar", null, "Bacillariophyta", "Bacillariophyceae", "Bacillariales", "Bacillariaceae", "Cylindrotheca", "Cylindrotheca closterium"], [31294121, "PRJNA635397_P_NODE_43875_length_245_cov_2.215116_g43421_i0", "PRJNA635397", "43875", "245", "2.215116", "5.4270342", "root", "1", "Root_unresolved", "Root_unresolved", "154", "2.1499999999999994e-42", "", "NR", "KAI2502664.1", "210448", "g43421", "i0", "91.4", "14.8775510204082", "81", "7", "99.2", "0", "1", "243", "348", "428", "KAI2502664.1 snoRNA binding protein [Fragilaria crotonensis]", "diamond", "3645", "154", "1", "Eukaryota", "Sar", null, "Bacillariophyta", "Fragilariophyceae", "Fragilariales", "Fragilariaceae", "Fragilaria", "Fragilaria crotonensis"], [31408272, "PRJNA635397_P_NODE_7496_length_665_cov_4.542230_g7055_i0", "PRJNA635397", "7496", "665", "4.54223", "30.2058295", "Fragilaria crotonensis", "210448", "SAR_Eukaryotes", "SAR_Eukaryotes", "160", "2.54e-45", "", "NR", "KAI2494838.1", "210448", "g7055", "i0", "48", "0.902255639097744", "200", "102", "89.8", "2", "35", "631", "10", "208", "KAI2494838.1 ATP synthase delta (OSCP) subunit [Fragilaria crotonensis]", "diamond", "600", "160", "1", "Eukaryota", "Sar", null, "Bacillariophyta", "Fragilariophyceae", "Fragilariales", "Fragilariaceae", "Fragilaria", "Fragilaria crotonensis"], [31724380, "PRJNA635397_P_NODE_47757_length_231_cov_2.322785_g47303_i0", "PRJNA635397", "47757", "231", "2.322785", "5.36563335", "Skeletonema marinoi", "267567", "SAR_Eukaryotes", "SAR_Eukaryotes", "106", "1.0099999999999999e-24", "", "NR", "KAK1745601.1", "267567", "g47303", "i0", "66.2", "6.74025974025974", "74", "25", "96.1", "0", "2", "223", "346", "419", "KAK1745601.1 sulfite reductase [Skeletonema marinoi]", "diamond", "1557", "106", "1", "Eukaryota", "Sar", null, "Bacillariophyta", "Coscinodiscophyceae", "Thalassiosirales", "Skeletonemataceae", "Skeletonema", "Skeletonema marinoi"], [31736830, "PRJNA635397_P_NODE_22677_length_337_cov_1.170455_g22223_i0", "PRJNA635397", "22677", "337", "1.170455", "3.94443335", "Bacillariophyta", "2836", "SAR_Eukaryotes", "SAR_Eukaryotes", "86.3", "2.08e-18", "", "NR", "KAK1741114.1", "267567", "g22223", "i0", "82.6", "4.7893175074184", "46", "8", "40.9", "0", "337", "200", "99", "144", "KAK1741114.1 NFYB/HAP3 family transcription factor subunit [Skeletonema marinoi]", "diamond", "1614", "86.3", "1", "Eukaryota", "Sar", null, "Bacillariophyta", "Coscinodiscophyceae", "Thalassiosirales", "Skeletonemataceae", "Skeletonema", "Skeletonema marinoi"], [32306788, "PRJNA635397_P_NODE_32699_length_277_cov_2.049020_g32245_i0", "PRJNA635397", "32699", "277", "2.04902", "5.6757854", "Bacillariophyta", "2836", "SAR_Eukaryotes", "SAR_Eukaryotes", "77.8", "2.53e-14", "", "NR", "KAK1733223.1", "267567", "g32245", "i0", "67.2", "3.24909747292419", "58", "18", "61.7", "1", "105", "275", "140", "197", "KAK1733223.1 DUF4336 domain-containing protein [Skeletonema marinoi]", "diamond", "900", "78.2", "0.994884910485933", "Eukaryota", "Sar", null, "Bacillariophyta", "Coscinodiscophyceae", "Thalassiosirales", "Skeletonemataceae", "Skeletonema", "Skeletonema marinoi"], [32433262, "PRJNA635397_P_NODE_37419_length_258_cov_1.675676_g36965_i0", "PRJNA635397", "37419", "258", "1.675676", "4.32324408", "Bacillariophyta", "2836", "SAR_Eukaryotes", "SAR_Eukaryotes", "123", "1.68e-30", "", "NR", "KAL3782590.1", "382360", "g36965", "i0", "63.5", "5.96511627906977", "85", "31", "98.8", "0", "2", "256", "332", "416", "KAL3782590.1 hypothetical protein ACHAWO_008241 [Cyclotella atomus]", "diamond", "1539", "123", "1", "Eukaryota", "Sar", null, "Bacillariophyta", "Coscinodiscophyceae", "Stephanodiscales", "Stephanodiscaceae", "Cyclotella", "Cyclotella atomus"]], "truncated": false, "filtered_table_rows_count": 20, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA635397", "p2": "Bacillariophyta"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA635397&tax_phylum=Bacillariophyta", "results": [{"value": "PRJNA635397", "label": "PRJNA635397", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Bacillariophyta", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA635397&tax_phylum=Bacillariophyta", "results": [{"value": "diamond", "label": "diamond", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA635397&tax_phylum=Bacillariophyta", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA635397&tax_phylum=Bacillariophyta", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA635397&tax_phylum=Bacillariophyta&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA635397&tax_phylum=Bacillariophyta", "results": [{"value": "Sar", "label": "Sar", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA635397&tax_phylum=Bacillariophyta&tax_clade=Sar", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA635397&tax_phylum=Bacillariophyta", "results": [], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA635397&tax_phylum=Bacillariophyta", "results": [{"value": "Bacillariophyta", "label": "Bacillariophyta", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA635397", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 338.3884979994036}