{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA633835\" and tax_phylum = \"Pseudomonadota\"", "rows": [[6255926, "PRJNA633835_S_NODE_4265_length_325_cov_1.833333_g4197_i0", "PRJNA633835", "4265", "325", "1.833333", "5.95833225", "Duganella fentianensis", "2692177", "Bacteria", "Bacteria", "145", "3.829999999999999e-41", "", "NR", "WP_161033893.1", "2692177", "g4197", "i0", "93.9", "0.756923076923077", "82", "5", "75.7", "0", "248", "3", "1", "82", "WP_161033893.1 nitroreductase [Duganella fentianensis]", "diamond", "246", "145", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Oxalobacteraceae", "Duganella", "Duganella fentianensis"], [27049387, "PRJNA633835_S_NODE_1402_length_467_cov_1.360406_g1334_i0", "PRJNA633835", "1402", "467", "1.360406", "6.35309602", "Escherichia coli", "562", "Bacteria", "Bacteria", "107", "3.28e-27", "", "NR", "WP_213080762.1", "562", "g1334", "i0", "65.1", "0.533190578158458", "83", "18", "46.3", "1", "264", "49", "2", "84", "WP_213080762.1 hypothetical protein, partial [Escherichia coli]", "diamond", "249", "107", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [27049389, "PRJNA633835_S_NODE_722_length_582_cov_18.774067_g655_i0", "PRJNA633835", "722", "582", "18.774067", "109.26506994", "Acinetobacter baumannii", "470", "Bacteria", "Bacteria", "102", "1.8899999999999998e-24", "", "NR", "OIC67842.1", "470", "g655", "i0", "79.7", "0.355670103092784", "69", "14", "35.6", "0", "223", "17", "3", "71", "OIC67842.1 hypothetical protein A7L55_18305 [Acinetobacter baumannii]", "diamond", "207", "102", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Moraxellales", "Moraxellaceae", "Acinetobacter", "Acinetobacter baumannii"], [27302282, "PRJNA633835_S_NODE_1243_length_485_cov_18.434466_g1175_i0", "PRJNA633835", "1243", "485", "18.434466", "89.4071601", "Acinetobacter baumannii", "470", "Bacteria", "Bacteria", "107", "5.3200000000000006e-27", "", "NR", "OIC67842.1", "470", "g1175", "i0", "81.2", "0.841237113402062", "69", "13", "42.7", "0", "263", "469", "3", "71", "OIC67842.1 hypothetical protein A7L55_18305 [Acinetobacter baumannii]", "diamond", "408", "107", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Moraxellales", "Moraxellaceae", "Acinetobacter", "Acinetobacter baumannii"], [28280866, "PRJNA633835_S_NODE_546_length_639_cov_26.273852_g481_i0", "PRJNA633835", "546", "639", "26.273852", "167.88991428", "Escherichia coli", "562", "Bacteria", "Bacteria", "124", "1.72e-33", "", "NR", "PMD93738.1", "562", "g481", "i0", "95.1", "0.286384976525822", "61", "3", "28.6", "0", "180", "362", "1", "61", "PMD93738.1 hypothetical protein A8A04_13700 [Escherichia coli]", "diamond", "183", "124", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [28312742, "PRJNA633835_S_NODE_5106_length_308_cov_0.931915_g5038_i0", "PRJNA633835", "5106", "308", "0.931915", "2.8702982", "Escherichia coli", "562", "Bacteria", "Bacteria", "41.2", "0.045", "", "NR", "WP_213080760.1", "562", "g5038", "i0", "82.6", "0.224025974025974", "23", "4", "22.4", "0", "213", "281", "13", "35", "WP_213080760.1 hypothetical protein, partial [Escherichia coli]", "diamond", "69", "41.2", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [28407404, "PRJNA633835_S_NODE_11686_length_243_cov_0.888235_g11618_i0", "PRJNA633835", "11686", "243", "0.888235", "2.15841105", "Klebsiella pneumoniae", "573", "Bacteria", "Bacteria", "43.5", "0.0117", "", "NR", "WP_228264608.1", "573", "g11618", "i0", "95.5", "1.62962962962963", "22", "1", "27.2", "0", "241", "176", "89", "110", "WP_228264608.1 transposase, partial [Klebsiella pneumoniae]", "diamond", "396", "43.9", "0.990888382687927", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Klebsiella", "Klebsiella pneumoniae"], [28470628, "PRJNA633835_S_NODE_7166_length_277_cov_1.122549_g7098_i0", "PRJNA633835", "7166", "277", "1.122549", "3.10946073", "Duganella qianjiadongensis", "2692176", "Bacteria", "Bacteria", "155", "1.94e-41", "", "NR", "WP_161037351.1", "2692176", "g7098", "i0", "83.1", "0.963898916967509", "89", "15", "96.4", "0", "267", "1", "415", "503", "WP_161037351.1 TonB-dependent receptor domain-containing protein [Duganella qianjiadongensis]", "diamond", "267", "155", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Oxalobacteraceae", "Duganella", "Duganella qianjiadongensis"], [28596920, "PRJNA633835_S_NODE_867_length_547_cov_34.740506_g800_i0", "PRJNA633835", "867", "547", "34.740506", "190.03056782", "Acinetobacter baumannii", "470", "Bacteria", "Bacteria", "104", "2.39e-25", "", "NR", "OIC67842.1", "470", "g800", "i0", "79.7", "0.745886654478976", "69", "14", "37.8", "0", "325", "531", "3", "71", "OIC67842.1 hypothetical protein A7L55_18305 [Acinetobacter baumannii]", "diamond", "408", "104", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Moraxellales", "Moraxellaceae", "Acinetobacter", "Acinetobacter baumannii"], [28660075, "PRJNA633835_S_NODE_11827_length_242_cov_0.952663_g11759_i0", "PRJNA633835", "11827", "242", "0.952663", "2.30544446", "Neoroseomonas marina", "1232220", "Bacteria", "Bacteria", "40.4", "0.0472", "", "NR", "WP_211187730.1", "1232220", "g11759", "i0", "66.7", "0.297520661157025", "24", "8", "29.8", "0", "55", "126", "57", "80", "WP_211187730.1 hypothetical protein, partial [Neoroseomonas marina]", "diamond", "72", "40.4", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Alphaproteobacteria", "Acetobacterales", "Acetobacteraceae", "Neoroseomonas", "Neoroseomonas marina"], [28660076, "PRJNA633835_S_NODE_407_length_702_cov_53.774245_g342_i0", "PRJNA633835", "407", "702", "53.774245", "377.4951999", "Escherichia coli", "562", "Bacteria", "Bacteria", "126", "8.100000000000001e-34", "", "NR", "PMD93738.1", "562", "g342", "i0", "96.7", "0.260683760683761", "61", "2", "26.1", "0", "180", "362", "1", "61", "PMD93738.1 hypothetical protein A8A04_13700 [Escherichia coli]", "diamond", "183", "126", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [28786072, "PRJNA633835_S_NODE_10267_length_249_cov_0.875000_g10199_i0", "PRJNA633835", "10267", "249", "0.875", "2.17875", "Acinetobacter towneri", "202956", "Bacteria", "Bacteria", "44.7", "0.00116", "", "NR", "WP_286430494.1", "202956", "g10199", "i0", "69", "0.349397590361446", "29", "9", "34.9", "0", "37", "123", "52", "80", "WP_286430494.1 hypothetical protein, partial [Acinetobacter towneri]", "diamond", "87", "44.7", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Moraxellales", "Moraxellaceae", "Acinetobacter", "Acinetobacter towneri"], [29196832, "PRJNA633835_S_NODE_1849_length_425_cov_3.167614_g1781_i0", "PRJNA633835", "1849", "425", "3.167614", "13.4623595", "Acinetobacter baumannii", "470", "Bacteria", "Bacteria", "96.3", "9.34e-23", "", "NR", "OIC67842.1", "470", "g1781", "i0", "78.3", "0.487058823529412", "69", "15", "48.7", "0", "223", "17", "3", "71", "OIC67842.1 hypothetical protein A7L55_18305 [Acinetobacter baumannii]", "diamond", "207", "96.3", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Moraxellales", "Moraxellaceae", "Acinetobacter", "Acinetobacter baumannii"], [29386278, "PRJNA633835_S_NODE_5769_length_297_cov_0.785714_g5701_i0", "PRJNA633835", "5769", "297", "0.785714", "2.33357058", "Neoroseomonas marina", "1232220", "Bacteria", "Bacteria", "41.2", "0.0411", "", "NR", "WP_211187730.1", "1232220", "g5701", "i0", "70.8", "0.242424242424242", "24", "7", "24.2", "0", "230", "159", "57", "80", "WP_211187730.1 hypothetical protein, partial [Neoroseomonas marina]", "diamond", "72", "41.2", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Alphaproteobacteria", "Acetobacterales", "Acetobacteraceae", "Neoroseomonas", "Neoroseomonas marina"], [30238891, "PRJNA633835_S_NODE_3972_length_332_cov_31.969112_g3904_i0", "PRJNA633835", "3972", "332", "31.969112", "106.13745184", "Acinetobacter baumannii", "470", "Bacteria", "Bacteria", "99", "2.6899999999999994e-24", "", "NR", "OIC67842.1", "470", "g3904", "i0", "78.3", "1.79819277108434", "69", "15", "62.3", "0", "223", "17", "3", "71", "OIC67842.1 hypothetical protein A7L55_18305 [Acinetobacter baumannii]", "diamond", "597", "99", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Moraxellales", "Moraxellaceae", "Acinetobacter", "Acinetobacter baumannii"], [30902446, "PRJNA633835_S_NODE_2214_length_401_cov_2.207317_g2146_i0", "PRJNA633835", "2214", "401", "2.207317", "8.85134117", "Duganella fentianensis", "2692177", "Bacteria", "Bacteria", "222", "7.14e-66", "", "NR", "WP_348695142.1", "2692177", "g2146", "i0", "96.2", "0.987531172069825", "132", "5", "98.8", "0", "3", "398", "210", "341", "WP_348695142.1 Ig-like domain-containing protein [Duganella fentianensis]", "diamond", "396", "222", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Oxalobacteraceae", "Duganella", "Duganella fentianensis"], [31028983, "PRJNA633835_S_NODE_315_length_780_cov_46.900990_g253_i0", "PRJNA633835", "315", "780", "46.90099", "365.827722", "Escherichia coli", "562", "Bacteria", "Bacteria", "126", "1.71e-33", "", "NR", "PMD93738.1", "562", "g253", "i0", "96.7", "0.234615384615385", "61", "2", "23.5", "0", "180", "362", "1", "61", "PMD93738.1 hypothetical protein A8A04_13700 [Escherichia coli]", "diamond", "183", "126", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [31154824, "PRJNA633835_S_NODE_75_length_1491_cov_28.289140_g1_i31", "PRJNA633835", "75", "1491", "28.28914", "421.7910774", "Escherichia coli", "562", "Bacteria", "Bacteria", "126", "1.7699999999999996e-31", "", "NR", "PMD93738.1", "562", "g1", "i31", "96.7", "0.122736418511066", "61", "2", "12.3", "0", "180", "362", "1", "61", "PMD93738.1 hypothetical protein A8A04_13700 [Escherichia coli]", "diamond", "183", "126", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [31629586, "PRJNA633835_S_NODE_7616_length_272_cov_0.768844_g7548_i0", "PRJNA633835", "7616", "272", "0.768844", "2.09125568", "Escherichia coli", "562", "Bacteria", "Bacteria", "59.7", "1.86e-9", "", "NR", "WP_213080760.1", "562", "g7548", "i0", "83.9", "0.341911764705882", "31", "5", "34.2", "0", "181", "89", "13", "43", "WP_213080760.1 hypothetical protein, partial [Escherichia coli]", "diamond", "93", "59.7", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [32672947, "PRJNA633835_S_NODE_320_length_774_cov_48.751783_g258_i0", "PRJNA633835", "320", "774", "48.751783", "377.33880042", "Escherichia coli", "562", "Bacteria", "Bacteria", "126", "1.6200000000000002e-33", "", "NR", "PMD93738.1", "562", "g258", "i0", "96.7", "0.236434108527132", "61", "2", "23.6", "0", "595", "413", "1", "61", "PMD93738.1 hypothetical protein A8A04_13700 [Escherichia coli]", "diamond", "183", "126", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Escherichia", "Escherichia coli"], [32704442, "PRJNA633835_S_NODE_6340_length_288_cov_1.502326_g6272_i0", "PRJNA633835", "6340", "288", "1.502326", "4.32669888", "Neoroseomonas marina", "1232220", "Bacteria", "Bacteria", "47", "2.14e-4", "", "NR", "WP_211187730.1", "1232220", "g6272", "i0", "54.1", "0.385416666666667", "37", "17", "38.5", "0", "27", "137", "44", "80", "WP_211187730.1 hypothetical protein, partial [Neoroseomonas marina]", "diamond", "111", "47", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Alphaproteobacteria", "Acetobacterales", "Acetobacteraceae", "Neoroseomonas", "Neoroseomonas marina"]], "truncated": false, "filtered_table_rows_count": 21, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA633835", "p2": "Pseudomonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA633835&tax_phylum=Pseudomonadota", "results": [{"value": "PRJNA633835", "label": "PRJNA633835", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Pseudomonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA633835&tax_phylum=Pseudomonadota", "results": [{"value": "diamond", "label": "diamond", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA633835&tax_phylum=Pseudomonadota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA633835&tax_phylum=Pseudomonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA633835&tax_phylum=Pseudomonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA633835&tax_phylum=Pseudomonadota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA633835&tax_phylum=Pseudomonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA633835&tax_phylum=Pseudomonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA633835&tax_phylum=Pseudomonadota", "results": [{"value": "Pseudomonadota", "label": "Pseudomonadota", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA633835", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 208.13846300006844}