{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA630162\" and tax_clade = \"Methanomada group\"", "rows": [[23553991, "PRJNA630162_P_NODE_110979_length_179_cov_1.730769_g109456_i0", "PRJNA630162", "110979", "179", "1.730769", "3.09807651", "Methanobacteriaceae archaeon", "2099680", "Archaea", "Archaea", "112", "7.160000000000001e-29", "", "NR", "MDP3036012.1", "2099680", "g109456", "i0", "98.3", "1.97765363128492", "59", "1", "98.9", "0", "2", "178", "122", "180", "MDP3036012.1 methyl-coenzyme M reductase subunit beta [Methanobacteriaceae archaeon]", "diamond", "354", "112", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", null, "Methanobacteriaceae archaeon"], [24828509, "PRJNA630162_P_NODE_40120_length_281_cov_1.021552_g38597_i0", "PRJNA630162", "40120", "281", "1.021552", "2.87056112", "Methanobacteriaceae archaeon", "2099680", "Archaea", "Archaea", "103", "6.63e-24", "", "NR", "HSO25705.1", "2099680", "g38597", "i0", "53.2", "1.00355871886121", "94", "43", "99.3", "1", "281", "3", "79", "172", "HSO25705.1 hypothetical protein [Methanobacteriaceae archaeon]", "diamond", "282", "103", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", null, "Methanobacteriaceae archaeon"], [26859691, "PRJNA630162_P_NODE_90961_length_191_cov_1.767606_g89438_i0", "PRJNA630162", "90961", "191", "1.767606", "3.37612746", "Methanobrevibacter sp.", "66852", "Archaea", "Archaea", "44.7", "0.004", "", "NR", "MBR5503518.1", "66852", "g89438", "i0", "45.5", "0.691099476439791", "44", "22", "69.1", "1", "11", "142", "50", "91", "MBR5503518.1 hypothetical protein [Methanobrevibacter sp.]", "diamond", "132", "44.7", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [26985704, "PRJNA630162_P_NODE_161822_length_162_cov_0.920354_g160299_i0", "PRJNA630162", "161822", "162", "0.920354", "1.49097348", "Methanobrevibacter sp.", "66852", "Archaea", "Archaea", "49.7", "4.36e-5", "", "NR", "WP_407454888.1", "66852", "g160299", "i0", "56.3", "0.888888888888889", "48", "20", "88.9", "1", "149", "6", "130", "176", "WP_407454888.1 right-handed parallel beta-helix repeat-containing protein [Methanobrevibacter sp.]", "diamond", "144", "49.7", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [27807439, "PRJNA630162_P_NODE_140324_length_167_cov_0.881356_g138801_i0", "PRJNA630162", "140324", "167", "0.881356", "1.47186452", "Methanobrevibacter sp.", "66852", "Archaea", "Archaea", "58.2", "4.8e-8", "", "NR", "MBR5504340.1", "66852", "g138801", "i0", "54.9", "0.916167664670659", "51", "19", "91.6", "1", "1", "153", "437", "483", "MBR5504340.1 AAA family ATPase [Methanobrevibacter sp.]", "diamond", "153", "58.2", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [27883031, "PRJNA630162_P_NODE_152025_length_164_cov_0.904348_g150502_i0", "PRJNA630162", "152025", "164", "0.904348", "1.48313072", "Methanobrevibacter", "2172", "Archaea", "Archaea", "104", "2.7e-27", "", "NR", "WP_405310204.1", "66852", "g150502", "i0", "98.1", "7.60975609756098", "52", "1", "95.1", "0", "156", "1", "12", "63", "WP_405310204.1 winged helix-turn-helix transcriptional regulator [Methanobrevibacter sp.]", "diamond", "1248", "104", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [29448811, "PRJNA630162_P_NODE_161790_length_162_cov_0.920354_g160267_i0", "PRJNA630162", "161790", "162", "0.920354", "1.49097348", "Methanobacteriaceae archaeon", "2099680", "Archaea", "Archaea", "68.9", "6.58e-12", "", "NR", "MBX7076500.1", "2099680", "g160267", "i0", "56.9", "0.944444444444444", "51", "22", "94.4", "0", "155", "3", "336", "386", "MBX7076500.1 elongation factor Tu [Methanobacteriaceae archaeon]", "diamond", "153", "68.9", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", null, "Methanobacteriaceae archaeon"], [30333864, "PRJNA630162_P_NODE_132272_length_169_cov_0.866667_g130749_i0", "PRJNA630162", "132272", "169", "0.866667", "1.46466723", "uncultured Methanobrevibacter sp.", "253161", "Archaea", "Archaea", "97.8", "9.86e-23", "", "NR", "WP_296891192.1", "253161", "g130749", "i0", "96.4", "2.92899408284024", "55", "2", "97.6", "0", "169", "5", "245", "299", "WP_296891192.1 Ig-like domain-containing protein, partial [uncultured Methanobrevibacter sp.]", "diamond", "495", "97.8", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "uncultured Methanobrevibacter sp."], [30491519, "PRJNA630162_P_NODE_156473_length_163_cov_0.912281_g154950_i0", "PRJNA630162", "156473", "163", "0.912281", "1.48701803", "uncultured Methanobrevibacter sp.", "253161", "Archaea", "Archaea", "100", "4.7399999999999997e-23", "", "NR", "WP_296852426.1", "253161", "g154950", "i0", "98.1", "1.91411042944785", "52", "1", "95.7", "0", "158", "3", "37", "88", "WP_296852426.1 helicase HerA-like domain-containing protein [uncultured Methanobrevibacter sp.]", "diamond", "312", "100", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "uncultured Methanobrevibacter sp."], [30807348, "PRJNA630162_P_NODE_103934_length_183_cov_1.910448_g102411_i0", "PRJNA630162", "103934", "183", "1.910448", "3.49611984", "Methanobrevibacter sp. UBA188", "1915473", "Archaea", "Archaea", "129", "5.18e-33", "", "NR", "WP_292881706.1", "1915473", "g102411", "i0", "100", "0.967213114754098", "59", "0", "96.7", "0", "2", "178", "525", "583", "WP_292881706.1 PP2C family protein-serine/threonine phosphatase [Methanobrevibacter sp. UBA188]", "diamond", "177", "129", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp. UBA188"], [31755965, "PRJNA630162_P_NODE_85337_length_196_cov_0.993197_g83814_i0", "PRJNA630162", "85337", "196", "0.993197", "1.94666612", "Methanocaldococcus lauensis", "2546128", "Archaea", "Archaea", "63.5", "4.47e-10", "", "NR", "CAB3287519.1", "2546128", "g83814", "i0", "55", "0.918367346938776", "60", "23", "85.7", "1", "175", "8", "112", "171", "CAB3287519.1 protein of unknown function [Methanocaldococcus lauensis]", "diamond", "180", "63.5", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanococci", "Methanococcales", "Methanocaldococcaceae", "Methanocaldococcus", "Methanocaldococcus lauensis"], [32294202, "PRJNA630162_P_NODE_82139_length_199_cov_1.646667_g80616_i0", "PRJNA630162", "82139", "199", "1.646667", "3.27686733", "Methanobrevibacter sp.", "66852", "Archaea", "Archaea", "70.9", "9.49e-14", "", "NR", "MBO7211560.1", "66852", "g80616", "i0", "50.8", "0.979899497487437", "65", "30", "96.5", "2", "6", "197", "22", "85", "MBO7211560.1 hypothetical protein [Methanobrevibacter sp.]", "diamond", "195", "70.9", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [32452136, "PRJNA630162_P_NODE_132539_length_169_cov_0.866667_g131016_i0", "PRJNA630162", "132539", "169", "0.866667", "1.46466723", "Methanobrevibacter sp.", "66852", "Archaea", "Archaea", "94", "1.26e-20", "", "NR", "WP_405309801.1", "66852", "g131016", "i0", "80.4", "2.98224852071006", "56", "9", "99.4", "1", "1", "168", "1428", "1481", "WP_405309801.1 beta strand repeat-containing protein, partial [Methanobrevibacter sp.]", "diamond", "504", "94", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [32452159, "PRJNA630162_P_NODE_149019_length_165_cov_0.896552_g147496_i0", "PRJNA630162", "149019", "165", "0.896552", "1.4793108", "Methanobrevibacter sp.", "66852", "Archaea", "Archaea", "107", "3.7e-28", "", "NR", "WP_292783638.1", "66852", "g147496", "i0", "94.3", "4.81818181818182", "53", "3", "96.4", "0", "163", "5", "67", "119", "WP_292783638.1 nuclease [Methanobrevibacter sp.]", "diamond", "795", "107", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [32483605, "PRJNA630162_P_NODE_113479_length_178_cov_1.255814_g111956_i0", "PRJNA630162", "113479", "178", "1.255814", "2.23534892", "Methanobrevibacter millerae", "230361", "Archaea", "Archaea", "115", "2.76e-28", "", "NR", "WP_149731223.1", "230361", "g111956", "i0", "96.5", "0.960674157303371", "57", "2", "96.1", "0", "173", "3", "299", "355", "WP_149731223.1 type I restriction-modification system subunit M [Methanobrevibacter millerae]", "diamond", "171", "115", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter millerae"], [32672676, "PRJNA630162_P_NODE_114500_length_177_cov_2.015625_g112977_i0", "PRJNA630162", "114500", "177", "2.015625", "3.56765625", "Methanobrevibacter sp.", "66852", "Archaea", "Archaea", "109", "5.08e-28", "", "NR", "WP_405273466.1", "66852", "g112977", "i0", "96.3", "1.83050847457627", "54", "2", "91.5", "0", "164", "3", "108", "161", "WP_405273466.1 4Fe-4S double cluster binding domain-containing protein [Methanobrevibacter sp.]", "diamond", "324", "109", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [32704200, "PRJNA630162_P_NODE_152840_length_164_cov_0.904348_g151317_i0", "PRJNA630162", "152840", "164", "0.904348", "1.48313072", "uncultured Methanobrevibacter sp.", "253161", "Archaea", "Archaea", "94.4", "1.08e-21", "", "NR", "WP_298501138.1", "253161", "g151317", "i0", "98.1", "0.969512195121951", "53", "1", "97", "0", "5", "163", "1", "53", "WP_298501138.1 hypothetical protein [uncultured Methanobrevibacter sp.]", "diamond", "159", "94.4", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "uncultured Methanobrevibacter sp."], [32893079, "PRJNA630162_P_NODE_111200_length_179_cov_1.530769_g109677_i0", "PRJNA630162", "111200", "179", "1.530769", "2.74007651", "Methanobrevibacter sp.", "66852", "Archaea", "Archaea", "90.5", "2.24e-19", "", "NR", "MBO7695876.1", "66852", "g109677", "i0", "66.1", "1.9608938547486", "59", "20", "98.9", "0", "1", "177", "386", "444", "MBO7695876.1 hypothetical protein [Methanobrevibacter sp.]", "diamond", "351", "90.5", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."]], "truncated": false, "filtered_table_rows_count": 18, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA630162", "p2": "Methanomada group"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA630162&tax_clade=Methanomada+group", "results": [{"value": "PRJNA630162", "label": "PRJNA630162", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_clade=Methanomada+group", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA630162&tax_clade=Methanomada+group", "results": [{"value": "diamond", "label": "diamond", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA630162&tax_clade=Methanomada+group", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA630162&tax_clade=Methanomada+group", "results": [{"value": "Archaea", "label": "Archaea", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA630162&tax_clade=Methanomada+group&tax_superkingdom=Archaea", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA630162&tax_clade=Methanomada+group", "results": [{"value": "Methanomada group", "label": "Methanomada group", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA630162", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA630162&tax_clade=Methanomada+group", "results": [{"value": "Methanobacteriati", "label": "Methanobacteriati", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA630162&tax_clade=Methanomada+group&tax_kingdom=Methanobacteriati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA630162&tax_clade=Methanomada+group", "results": [{"value": "Methanobacteriota", "label": "Methanobacteriota", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA630162&tax_clade=Methanomada+group&tax_phylum=Methanobacteriota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 440.7829139963724}