{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA609258\" and tax_phylum = \"Bacteroidota\"", "rows": [[588022, "PRJNA609258_P_NODE_59241_length_243_cov_0.917647_g58856_i0", "PRJNA609258", "59241", "243", "0.917647", "2.22988221", "Kaistella pullorum", "2763074", "Bacteria", "Bacteria", "93.6", "4.22e-21", "", "NR", "WP_251832140.1", "2763074", "g58856", "i0", "78.2", "5.66666666666667", "55", "12", "67.9", "0", "76", "240", "5", "59", "WP_251832140.1 glycosyltransferase family 2 protein [Kaistella pullorum]", "diamond", "1377", "93.6", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Weeksellaceae", "Kaistella", "Kaistella pullorum"], [17165149, "PRJNA609258_P_NODE_38794_length_295_cov_1.405405_g38409_i0", "PRJNA609258", "38794", "295", "1.405405", "4.14594475", "Bacteroidota", "976", "Bacteria", "Bacteria", "171", "2.77e-49", "", "NR", "WP_111294315.1", "1004304", "g38409", "i0", "84", "33.7423728813559", "94", "15", "95.6", "0", "285", "4", "4", "97", "WP_111294315.1 NADP-dependent isocitrate dehydrogenase [Hydrotalea sandarakina]", "diamond", "9954", "171", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Chitinophagia", "Chitinophagales", "Chitinophagaceae", "Hydrotalea", "Hydrotalea sandarakina"], [27048581, "PRJNA609258_P_NODE_50922_length_252_cov_0.871508_g50537_i0", "PRJNA609258", "50922", "252", "0.871508", "2.19620016", "Chryseobacterium sp.", "1871047", "Bacteria", "Bacteria", "72.8", "8.14e-13", "", "NR", "TXI86969.1", "1871047", "g50537", "i0", "50.7", "0.821428571428571", "69", "33", "81", "1", "214", "11", "280", "348", "TXI86969.1 MAG: hypothetical protein E6Q36_08295 [Chryseobacterium sp.]", "diamond", "207", "72.8", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Weeksellaceae", "Chryseobacterium", "Chryseobacterium sp."], [27333178, "PRJNA609258_P_NODE_56483_length_246_cov_0.901734_g56098_i0", "PRJNA609258", "56483", "246", "0.901734", "2.21826564", "Pedobacter ureilyticus", "1393051", "Bacteria", "Bacteria", "166", "7.29e-48", "", "NR", "WP_138724024.1", "1393051", "g56098", "i0", "100", "1", "82", "0", "100", "0", "1", "246", "17", "98", "WP_138724024.1 prolyl oligopeptidase family serine peptidase [Pedobacter ureilyticus]", "diamond", "246", "166", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Sphingobacteriia", "Sphingobacteriales", "Sphingobacteriaceae", "Pedobacter", "Pedobacter ureilyticus"], [27756905, "PRJNA609258_P_NODE_52604_length_250_cov_0.881356_g52219_i0", "PRJNA609258", "52604", "250", "0.881356", "2.20339", "Porphyromonadaceae", "171551", "Bacteria", "Bacteria", "117", "3.07e-28", "", "NR", "WP_007365865.1", "281920", "g52219", "i0", "69.9", "8.964", "83", "25", "99.6", "0", "249", "1", "13", "95", "WP_007365865.1 calcium-translocating P-type ATPase, PMCA-type [Porphyromonas uenonis]", "diamond", "2241", "117", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Bacteroidia", "Bacteroidales", "Porphyromonadaceae", "Porphyromonas", "Porphyromonas uenonis"], [28198494, "PRJNA609258_P_NODE_55426_length_247_cov_0.896552_g55041_i0", "PRJNA609258", "55426", "247", "0.896552", "2.21448344", "Chryseobacterium", "59732", "Bacteria", "Bacteria", "145", "5.9e-40", "", "NR", "WP_072953088.1", "1416778", "g55041", "i0", "85.4", "21.9109311740891", "82", "12", "99.6", "0", "1", "246", "265", "346", "WP_072953088.1 HlyD family secretion protein [Chryseobacterium arachidis]", "diamond", "5412", "145", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Weeksellaceae", "Chryseobacterium", "Chryseobacterium arachidis"], [28672427, "PRJNA609258_P_NODE_51607_length_251_cov_0.876404_g51222_i0", "PRJNA609258", "51607", "251", "0.876404", "2.19977404", "Bacteroidota", "976", "Bacteria", "Bacteria", "118", "1.2e-28", "", "NR", "WP_088467854.1", "2010998", "g51222", "i0", "61.4", "9.9203187250996", "83", "32", "99.2", "0", "251", "3", "310", "392", "WP_088467854.1 cation-translocating P-type ATPase [Chryseobacterium sp. VAUSW3]", "diamond", "2490", "119", "0.991596638655462", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Weeksellaceae", "Chryseobacterium", "Chryseobacterium sp. VAUSW3"], [28722427, "PRJNA609258_P_NODE_45087_length_269_cov_1.591837_g44702_i0", "PRJNA609258", "45087", "269", "1.591837", "4.28204153", "Pedobacter ureilyticus", "1393051", "Bacteria", "Bacteria", "173", "7.33e-48", "", "NR", "WP_138721359.1", "1393051", "g44702", "i0", "100", "0.992565055762082", "89", "0", "99.3", "0", "2", "268", "250", "338", "WP_138721359.1 DEAD/DEAH box helicase [Pedobacter ureilyticus]", "diamond", "267", "173", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Sphingobacteriia", "Sphingobacteriales", "Sphingobacteriaceae", "Pedobacter", "Pedobacter ureilyticus"], [29209204, "PRJNA609258_P_NODE_55789_length_246_cov_1.578035_g55404_i0", "PRJNA609258", "55789", "246", "1.578035", "3.8819661", "Mucilaginibacter", "423349", "Bacteria", "Bacteria", "113", "5.490000000000001e-27", "", "NR", "WP_147032620.1", "398053", "g55404", "i0", "59.8", "2", "82", "33", "100", "0", "246", "1", "51", "132", "WP_147032620.1 NRDE family protein [Mucilaginibacter ginsenosidivorans]", "diamond", "492", "114", "0.991228070175439", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Sphingobacteriia", "Sphingobacteriales", "Sphingobacteriaceae", "Mucilaginibacter", "Mucilaginibacter ginsenosidivorans"], [29385487, "PRJNA609258_P_NODE_59229_length_243_cov_0.917647_g58844_i0", "PRJNA609258", "59229", "243", "0.917647", "2.22988221", "Kaistella anthropi", "520603", "Bacteria", "Bacteria", "74.3", "1.37e-15", "", "NR", "MCB4235523.1", "520603", "g58844", "i0", "86.5", "0.45679012345679", "37", "5", "45.7", "0", "109", "219", "23", "59", "MCB4235523.1 hypothetical protein [Kaistella anthropi]", "diamond", "111", "74.3", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Weeksellaceae", "Kaistella", "Kaistella anthropi"], [30428122, "PRJNA609258_P_NODE_58033_length_244_cov_0.912281_g57648_i0", "PRJNA609258", "58033", "244", "0.912281", "2.22596564", "uncultured Porphyromonas sp.", "159274", "Bacteria", "Bacteria", "170", "6.44e-48", "", "NR", "WP_295020799.1", "159274", "g57648", "i0", "100", "1.99180327868852", "81", "0", "99.6", "0", "244", "2", "268", "348", "WP_295020799.1 right-handed parallel beta-helix repeat-containing protein [uncultured Porphyromonas sp.]", "diamond", "486", "170", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Bacteroidia", "Bacteroidales", "Porphyromonadaceae", "Porphyromonas", "uncultured Porphyromonas sp."], [30756782, "PRJNA609258_P_NODE_49574_length_253_cov_0.866667_g49189_i0", "PRJNA609258", "49574", "253", "0.866667", "2.19266751", "Alloprevotella", "1283313", "Bacteria", "Bacteria", "173", "2.4499999999999994e-52", "", "NR", "WP_009348600.1", "671218", "g49189", "i0", "98.8", "7.96837944664032", "84", "1", "99.6", "0", "252", "1", "159", "242", "WP_009348600.1 IS982 family transposase, partial [Alloprevotella rava]", "diamond", "2016", "173", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Bacteroidia", "Bacteroidales", "Prevotellaceae", "Alloprevotella", "Alloprevotella rava"], [30869990, "PRJNA609258_P_NODE_54394_length_248_cov_0.891429_g54009_i0", "PRJNA609258", "54394", "248", "0.891429", "2.21074392", "Bacteroidia bacterium", "2044936", "Bacteria", "Bacteria", "55.5", "1.29e-6", "", "NR", "GHT23346.1", "2044936", "g54009", "i0", "42.1", "0.919354838709677", "76", "37", "83.5", "2", "3", "209", "46", "121", "GHT23346.1 hypothetical protein AGMMS4957_14770 [Bacteroidia bacterium]", "diamond", "228", "55.5", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Bacteroidia", null, null, null, "Bacteroidia bacterium"], [30978088, "PRJNA609258_P_NODE_57494_length_245_cov_0.906977_g57109_i0", "PRJNA609258", "57494", "245", "0.906977", "2.22209365", "Bacteroidota", "976", "Bacteria", "Bacteria", "168", "1.9699999999999998e-47", "", "NR", "WP_348335225.1", "1872435", "g57109", "i0", "97.5", "4.95918367346939", "81", "2", "99.2", "0", "3", "245", "285", "365", "WP_348335225.1 ATP-dependent helicase, partial [Algoriphagus sp.]", "diamond", "1215", "168", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Cytophagia", "Cytophagales", "Cyclobacteriaceae", "Algoriphagus", "Algoriphagus sp."], [31122423, "PRJNA609258_P_NODE_59275_length_243_cov_0.917647_g58890_i0", "PRJNA609258", "59275", "243", "0.917647", "2.22988221", "Pedobacter sp. Leaf176", "1736286", "Bacteria", "Bacteria", "157", "2.61e-42", "", "NR", "WP_056094292.1", "1736286", "g58890", "i0", "93.8", "1", "81", "5", "100", "0", "243", "1", "312", "392", "WP_056094292.1 SusC/RagA family TonB-linked outer membrane protein [Pedobacter sp. Leaf176]", "diamond", "243", "157", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Sphingobacteriia", "Sphingobacteriales", "Sphingobacteriaceae", "Pedobacter", "Pedobacter sp. Leaf176"], [32103260, "PRJNA609258_P_NODE_54438_length_248_cov_0.891429_g54053_i0", "PRJNA609258", "54438", "248", "0.891429", "2.21074392", "Weeksellaceae bacterium A-14", "3143028", "Bacteria", "Bacteria", "151", "1.4999999999999999e-40", "", "NR", "MEN2433933.1", "3143028", "g54053", "i0", "85.4", "0.991935483870968", "82", "12", "99.2", "0", "2", "247", "501", "582", "MEN2433933.1 S9 family peptidase [Weeksellaceae bacterium A-14]", "diamond", "246", "151", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Weeksellaceae", null, "Weeksellaceae bacterium A-14"], [32653601, "PRJNA609258_P_NODE_50920_length_252_cov_0.871508_g50535_i0", "PRJNA609258", "50920", "252", "0.871508", "2.19620016", "Weeksellaceae", "2762318", "Bacteria", "Bacteria", "56.2", "7.19e-7", "", "NR", "WP_336686720.1", "1241978", "g50535", "i0", "72.7", "3.5", "33", "9", "39.3", "0", "152", "250", "221", "253", "WP_336686720.1 transcription termination factor Rho [Chryseobacterium bernardetii]", "diamond", "882", "56.6", "0.992932862190813", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Weeksellaceae", "Chryseobacterium", "Chryseobacterium bernardetii"], [32653602, "PRJNA609258_P_NODE_51400_length_251_cov_0.876404_g51015_i0", "PRJNA609258", "51400", "251", "0.876404", "2.19977404", "Pedobacter", "84567", "Bacteria", "Bacteria", "112", "7.47e-29", "", "NR", "WP_131539730.1", "2488994", "g51015", "i0", "96.3", "1.29083665338645", "54", "2", "64.5", "0", "249", "88", "169", "222", "WP_131539730.1 cytochrome b/b6 domain-containing protein [Pedobacter nototheniae]", "diamond", "324", "112", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Sphingobacteriia", "Sphingobacteriales", "Sphingobacteriaceae", "Pedobacter", "Pedobacter nototheniae"]], "truncated": false, "filtered_table_rows_count": 18, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA609258", "p2": "Bacteroidota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA609258&tax_phylum=Bacteroidota", "results": [{"value": "PRJNA609258", "label": "PRJNA609258", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Bacteroidota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA609258&tax_phylum=Bacteroidota", "results": [{"value": "diamond", "label": "diamond", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA609258&tax_phylum=Bacteroidota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA609258&tax_phylum=Bacteroidota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA609258&tax_phylum=Bacteroidota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA609258&tax_phylum=Bacteroidota", "results": [{"value": "FCB group", "label": "FCB group", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA609258&tax_phylum=Bacteroidota&tax_clade=FCB+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA609258&tax_phylum=Bacteroidota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA609258&tax_phylum=Bacteroidota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA609258&tax_phylum=Bacteroidota", "results": [{"value": "Bacteroidota", "label": "Bacteroidota", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA609258", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 281.93805100090685}