{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA608894\" and tax_phylum = \"Verrucomicrobiota\"", "rows": [[585894, "PRJNA608894_P_NODE_7061_length_1058_cov_4.724873_g6674_i0", "PRJNA608894", "7061", "1058", "4.724873", "49.98915634", "Chthoniobacter sp.", "2510640", "Bacteria", "Bacteria", "556", "9.869999999999999e-196", "", "NR", "MDR3405335.1", "2510640", "g6674", "i0", "85.3", "0.870510396975425", "307", "45", "87.1", "0", "1057", "137", "158", "464", "MDR3405335.1 translation elongation factor EF1A family protein [Chthoniobacter sp.]", "diamond", "921", "556", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", "Chthoniobacteraceae", "Chthoniobacter", "Chthoniobacter sp."], [13339546, "PRJNA608894_P_NODE_37271_length_294_cov_1.619910_g36772_i0", "PRJNA608894", "37271", "294", "1.61991", "4.7625354", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "156", "1.3499999999999997e-42", "", "NR", "OUU59431.1", "1986793", "g36772", "i0", "73.2", "11.8571428571429", "97", "26", "99", "0", "2", "292", "417", "513", "OUU59431.1 MAG: glycine dehydrogenase (aminomethyl-transferring), partial [Verrucomicrobia bacterium TMED60]", "diamond", "3486", "156", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobia bacterium TMED60"], [19711899, "PRJNA608894_P_NODE_30896_length_329_cov_0.898438_g30397_i0", "PRJNA608894", "30896", "329", "0.898438", "2.95586102", "Verrucomicrobiaceae bacterium", "2026800", "Bacteria", "Bacteria", "171", "5.39e-50", "", "NR", "RYD65414.1", "2026800", "g30397", "i0", "77.2", "0.9209726443769", "101", "23", "92.1", "0", "3", "305", "235", "335", "RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium]", "diamond", "303", "171", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", null, "Verrucomicrobiaceae bacterium"], [26840393, "PRJNA608894_P_NODE_55441_length_245_cov_2.232558_g54942_i0", "PRJNA608894", "55441", "245", "2.232558", "5.4697671", "Bacteria", "2", "Bacteria", "Bacteria", "47.4", "8.69e-4", "", "NR", "PYI86484.1", "2026799", "g54942", "i0", "36.7", "2.90204081632653", "79", "45", "95.5", "2", "234", "1", "38", "112", "PYI86484.1 MAG: succinate-semialdehyde dehydrogenase (NADP(+)), partial [Verrucomicrobiota bacterium]", "diamond", "711", "47.8", "0.99163179916318", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [29605999, "PRJNA608894_P_NODE_43590_length_270_cov_2.340102_g43091_i0", "PRJNA608894", "43590", "270", "2.340102", "6.3182754", "Persicirhabdus sediminis", "454144", "Bacteria", "Bacteria", "43.9", "0.0199", "", "NR", "WP_200312416.1", "454144", "g43091", "i0", "48.9", "0.5", "45", "20", "47.8", "3", "256", "128", "377", "420", "WP_200312416.1 membrane protein insertase YidC [Persicirhabdus sediminis]", "diamond", "135", "43.9", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Verrucomicrobiaceae", "Persicirhabdus", "Persicirhabdus sediminis"], [30648583, "PRJNA608894_P_NODE_14033_length_603_cov_3.281132_g13551_i0", "PRJNA608894", "14033", "603", "3.281132", "19.785225959999998", "Chthoniobacterales bacterium", "2201154", "Bacteria", "Bacteria", "87", "3.5e-17", "", "NR", "MEO5753320.1", "2201154", "g13551", "i0", "30.2", "0.955223880597015", "192", "106", "87.6", "6", "535", "8", "34", "213", "MEO5753320.1 CAP domain-containing protein [Chthoniobacterales bacterium]", "diamond", "576", "87", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", null, null, "Chthoniobacterales bacterium"], [31198648, "PRJNA608894_P_NODE_55355_length_246_cov_0.884393_g54856_i0", "PRJNA608894", "55355", "246", "0.884393", "2.17560678", "Verrucomicrobiota", "74201", "Bacteria", "Bacteria", "87.8", "7.46e-20", "", "NR", "NBV85467.1", "2026799", "g54856", "i0", "54.2", "3.01219512195122", "83", "37", "100", "1", "1", "246", "56", "138", "NBV85467.1 L,D-transpeptidase [Verrucomicrobiota bacterium]", "diamond", "741", "87.8", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [31344136, "PRJNA608894_P_NODE_43536_length_271_cov_1.040404_g43037_i0", "PRJNA608894", "43536", "271", "1.040404", "2.81949484", "Verrucomicrobiia bacterium", "2499141", "Bacteria", "Bacteria", "60.1", "4.12e-8", "", "NR", "HYG84357.1", "2499141", "g43037", "i0", "50.7", "0.74169741697417", "67", "33", "74.2", "0", "270", "70", "231", "297", "HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium]", "diamond", "201", "60.1", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "Verrucomicrobiia bacterium"]], "truncated": false, "filtered_table_rows_count": 8, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA608894", "p2": "Verrucomicrobiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA608894&tax_phylum=Verrucomicrobiota", "results": [{"value": "PRJNA608894", "label": "PRJNA608894", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA608894&tax_phylum=Verrucomicrobiota", "results": [{"value": "diamond", "label": "diamond", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA608894&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA608894&tax_phylum=Verrucomicrobiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA608894&tax_phylum=Verrucomicrobiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA608894&tax_phylum=Verrucomicrobiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA608894&tax_phylum=Verrucomicrobiota&tax_clade=PVC+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA608894&tax_phylum=Verrucomicrobiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA608894&tax_phylum=Verrucomicrobiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA608894&tax_phylum=Verrucomicrobiota", "results": [{"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 8, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA608894", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 408.37534199999936}