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"Helicobacter pylori"], [30206219, "PRJNA605033_P_NODE_98192_length_222_cov_1.994652_g96623_i0", "PRJNA605033", "98192", "222", "1.994652", "4.42812744", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "51.6", "2.95e-6", "", "NR", "GAA9128289.1", "210", "g96623", "i0", "43.1", "1.75675675675676", "65", "18", "87.8", "1", "222", "28", "22", "67", "GAA9128289.1 hypothetical protein Kyoto190A_1620 [Helicobacter pylori]", "diamond", "390", "51.6", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30333317, "PRJNA605033_P_NODE_8712_length_469_cov_4.576037_g7217_i0", "PRJNA605033", "8712", "469", "4.576037", "21.46161353", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "46.6", "6.45e-4", "", "NR", "GAA8766134.1", "210", "g7217", "i0", "90.5", "0.134328358208955", "21", "2", "13.4", "0", "228", "290", "1", "21", "GAA8766134.1 hypothetical protein Kyoto147A_4290 [Helicobacter pylori]", "diamond", "63", "46.6", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30377982, "PRJNA605033_P_NODE_195472_length_167_cov_13.356061_g193903_i0", "PRJNA605033", "195472", "167", "13.356061", "22.30462187", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "58.9", "2.14e-9", "", "NR", "GAA9176272.1", "210", "g193903", "i0", "85.2", "1.92215568862275", "27", "4", "48.5", "0", "158", "78", "1", "27", "GAA9176272.1 hypothetical protein Kyoto193A_0470 [Helicobacter pylori]", "diamond", "321", "58.9", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30428068, "PRJNA605033_P_NODE_9193_length_457_cov_3.500000_g7686_i0", "PRJNA605033", "9193", "457", "3.5", "15.995", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "58.5", "2.02e-8", "", "NR", "GAA8732422.1", "210", "g7686", "i0", "100", "0.183807439824945", "28", "0", "18.4", "0", "103", "186", "31", "58", "GAA8732422.1 hypothetical protein Kyoto147A_0630 [Helicobacter pylori]", "diamond", "84", "58.5", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30933173, "PRJNA605033_P_NODE_102034_length_222_cov_1.919786_g100465_i0", "PRJNA605033", "102034", "222", "1.919786", "4.26192492", "Campylobacter ureolyticus", "827", "Bacteria", "Bacteria", "54.3", "2.29e-6", "", "NR", "WP_016646312.1", "827", "g100465", "i0", "100", "0.324324324324324", "24", "0", "32.4", "0", "221", "150", "80", "103", "WP_016646312.1 amidophosphoribosyltransferase [Campylobacter ureolyticus]", "diamond", "72", "54.3", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter ureolyticus"], [31534016, "PRJNA605033_P_NODE_48276_length_242_cov_2.033816_g46708_i0", "PRJNA605033", "48276", "242", "2.033816", "4.92183472", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "47.8", "5.97e-5", "", "NR", "GAA9117791.1", "210", "g46708", "i0", "95.5", "0.272727272727273", "22", "1", "27.3", "0", "241", "176", "5", "26", "GAA9117791.1 hypothetical protein Kyoto184A_10260 [Helicobacter pylori]", "diamond", "66", "47.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"]], "truncated": false, "filtered_table_rows_count": 14, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA605033", "p2": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA605033&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA605033", "label": "PRJNA605033", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA605033&tax_phylum=Campylobacterota", "results": [{"value": "diamond", "label": "diamond", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA605033&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": 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"http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA605033&tax_phylum=Campylobacterota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA605033&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 14, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA605033", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 232.74270500041894}