{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA594101\" and tax_phylum = \"Chlamydiota\"", "rows": [[14595790, "PRJNA594101_S_NODE_1212_length_1321_cov_3.402244_g1082_i0", "PRJNA594101", "1212", "1321", "3.402244", "44.94364324", "Rhabdochlamydiaceae bacterium", "2047756", "Bacteria", "Bacteria", "129", "1.35e-32", "", "NR", "HNA62975.1", "2047756", "g1082", "i0", "98.5", "0.295230885692657", "65", "1", "14.8", "0", "794", "988", "4", "68", "HNA62975.1 hypothetical protein [Rhabdochlamydiaceae bacterium]", "diamond", "390", "129", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Candidatus Rhabdochlamydiaceae", null, "Rhabdochlamydiaceae bacterium"], [26604718, "PRJNA594101_S_NODE_50381_length_249_cov_1.142045_g50079_i0", "PRJNA594101", "50381", "249", "1.142045", "2.84369205", "Parachlamydiales bacterium", "2052178", "Bacteria", "Bacteria", "44.7", "0.00787", "", "NR", "MFA6915736.1", "2052178", "g50079", "i0", "46.3", "0.493975903614458", "41", "22", "49.4", "0", "185", "63", "32", "72", "MFA6915736.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Parachlamydiales bacterium]", "diamond", "123", "44.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", null, null, "Parachlamydiales bacterium"], [26890161, "PRJNA594101_S_NODE_35221_length_291_cov_3.509174_g34919_i0", "PRJNA594101", "35221", "291", "3.509174", "10.21169634", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "78.2", "1.38e-16", "", "NR", "MCP5470428.1", "2047757", "g34919", "i0", "55.4", "0.670103092783505", "65", "29", "67", "0", "289", "95", "14", "78", "MCP5470428.1 hypothetical protein [Chlamydiales bacterium]", "diamond", "195", "78.2", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [27837660, "PRJNA594101_S_NODE_12804_length_461_cov_2.036082_g12502_i0", "PRJNA594101", "12804", "461", "2.036082", "9.38633802", "Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_11", "1797603", "Bacteria", "Bacteria", "63.5", "1.16e-8", "", "NR", "OGN62353.1", "1797603", "g12502", "i0", "40.3", "0.501084598698482", "77", "44", "50.1", "1", "230", "460", "44", "118", "OGN62353.1 MAG: hypothetical protein A3F09_03785 [Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_11]", "diamond", "231", "63.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_11"], [27869270, "PRJNA594101_S_NODE_20645_length_369_cov_1.888514_g20343_i0", "PRJNA594101", "20645", "369", "1.888514", "6.96861666", "Chlamydiia bacterium", "2052156", "Bacteria", "Bacteria", "67.4", "8.49e-11", "", "NR", "MCB1136078.1", "2052156", "g20343", "i0", "47.7", "0.528455284552846", "65", "34", "52.8", "0", "321", "127", "131", "195", "MCB1136078.1 U-box domain-containing protein [Chlamydiia bacterium]", "diamond", "195", "67.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", null, null, null, "Chlamydiia bacterium"], [28058825, "PRJNA594101_S_NODE_21025_length_366_cov_1.668942_g20723_i0", "PRJNA594101", "21025", "366", "1.668942", "6.10832772", "Candidatus Neptunochlamydia sp. REUL1", "3064277", "Bacteria", "Bacteria", "84", "1.9e-16", "", "NR", "WP_316357043.1", "3064277", "g20723", "i0", "52", "0.614754098360656", "75", "36", "61.5", "0", "344", "120", "162", "236", "WP_316357043.1 ubiquitin-like protein [Candidatus Neptunochlamydia sp. REUL1]", "diamond", "225", "84", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Candidatus Neptunichlamydia", "Candidatus Neptunichlamydia sp. REUL1"], [28090363, "PRJNA594101_S_NODE_2225_length_1039_cov_5.428571_g2033_i0", "PRJNA594101", "2225", "1039", "5.428571", "56.40285269", "Chlamydiia bacterium", "2052156", "Bacteria", "Bacteria", "117", "2.15e-27", "", "NR", "MCB1108916.1", "2052156", "g2033", "i0", "48.3", "0.346487006737247", "120", "58", "34.6", "1", "362", "3", "27", "142", "MCB1108916.1 methyltransferase domain-containing protein [Chlamydiia bacterium]", "diamond", "360", "117", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", null, null, null, "Chlamydiia bacterium"], [28184945, "PRJNA594101_S_NODE_45066_length_260_cov_1.647059_g44764_i0", "PRJNA594101", "45066", "260", "1.647059", "4.2823534", "Candidatus Amphrikana amoebophyrae", "3076870", "Bacteria", "Bacteria", "47", "0.00135", "", "NR", "MDN3504658.1", "3076870", "g44764", "i0", "41.5", "0.611538461538462", "53", "24", "54.2", "2", "245", "105", "130", "181", "MDN3504658.1 glycosyltransferase family A protein [Candidatus Amphrikana amoebophyrae]", "diamond", "159", "47", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Candidatus Amphrikana", "Candidatus Amphrikana amoebophyrae"], [28469500, "PRJNA594101_S_NODE_10806_length_499_cov_87.518779_g10505_i0", "PRJNA594101", "10806", "499", "87.518779", "436.71870721", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "257", "2.44e-85", "", "NR", "MCP5470421.1", "2047757", "g10505", "i0", "81.6", "0.913827655310621", "152", "28", "91.4", "0", "2", "457", "7", "158", "MCP5470421.1 hypothetical protein [Chlamydiales bacterium]", "diamond", "456", "257", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [28690610, "PRJNA594101_S_NODE_58587_length_232_cov_2.069182_g58285_i0", "PRJNA594101", "58587", "232", "2.069182", "4.80050224", "Simkania sp.", "34094", "Bacteria", "Bacteria", "132", "2.42e-38", "", "NR", "MCB1084366.1", "34094", "g58285", "i0", "92.1", "0.982758620689655", "76", "6", "98.3", "0", "3", "230", "22", "97", "MCB1084366.1 hypothetical protein [Simkania sp.]", "diamond", "228", "132", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Simkania", "Simkania sp."], [28703903, "PRJNA594101_S_NODE_37207_length_284_cov_2.023697_g36905_i0", "PRJNA594101", "37207", "284", "2.023697", "5.74729948", "Bacteria", "2", "Bacteria", "Bacteria", "43.9", "0.0211", "", "NR", "WP_194847945.1", "1651774", "g36905", "i0", "45.7", "1.54225352112676", "46", "24", "47.5", "1", "261", "127", "183", "228", "WP_194847945.1 glycosyltransferase family A protein [Candidatus Neptunochlamydia vexilliferae]", "diamond", "438", "43.9", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Candidatus Neptunichlamydia", "Candidatus Neptunichlamydia vexilliferae"], [29037909, "PRJNA594101_S_NODE_2228_length_1038_cov_102.234197_g2036_i0", "PRJNA594101", "2228", "1038", "102.234197", "1061.19096486", "Simkania sp.", "34094", "Bacteria", "Bacteria", "257", "4.7e-81", "", "NR", "MCB1084310.1", "34094", "g2036", "i0", "74.7", "0.491329479768786", "170", "43", "49.1", "0", "275", "784", "1", "170", "MCB1084310.1 hypothetical protein [Simkania sp.]", "diamond", "510", "257", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Simkaniaceae", "Simkania", "Simkania sp."], [29195647, "PRJNA594101_S_NODE_11389_length_487_cov_5.289855_g11088_i0", "PRJNA594101", "11389", "487", "5.289855", "25.76159385", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "208", "6.22e-66", "", "NR", "MCP5470421.1", "2047757", "g11088", "i0", "83.2", "0.73305954825462", "119", "20", "73.3", "0", "485", "129", "3", "121", "MCP5470421.1 hypothetical protein [Chlamydiales bacterium]", "diamond", "357", "208", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [29542757, "PRJNA594101_S_NODE_33150_length_299_cov_1.650442_g32848_i0", "PRJNA594101", "33150", "299", "1.650442", "4.93482158", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "63.5", "3.47e-9", "", "NR", "MBM3193275.1", "2081524", "g32848", "i0", "37.4", "0.993311036789298", "99", "56", "98.3", "4", "296", "3", "64", "157", "MBM3193275.1 glycosyltransferase family 2 protein [Chlamydiota bacterium]", "diamond", "297", "63.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"], [29921974, "PRJNA594101_S_NODE_7871_length_582_cov_73.811395_g7571_i0", "PRJNA594101", "7871", "582", "73.811395", "429.5823189", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "213", "2.24e-67", "", "NR", "MCP5470420.1", "2047757", "g7571", "i0", "79.3", "0.747422680412371", "145", "28", "74.7", "1", "582", "148", "3", "145", "MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium]", "diamond", "435", "213", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [30648210, "PRJNA594101_S_NODE_24233_length_343_cov_1.803704_g23931_i0", "PRJNA594101", "24233", "343", "1.803704", "6.18670472", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "46.6", "0.00476", "", "NR", "MBM3208012.1", "2081524", "g23931", "i0", "41.2", "0.594752186588921", "68", "36", "59.5", "3", "343", "140", "193", "256", "MBM3208012.1 hypothetical protein [Chlamydiota bacterium]", "diamond", "204", "46.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"], [31248798, "PRJNA594101_S_NODE_51015_length_248_cov_1.697143_g50713_i0", "PRJNA594101", "51015", "248", "1.697143", "4.20891464", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "64.7", "7.27e-10", "", "NR", "MEC7839451.1", "2081524", "g50713", "i0", "55.6", "2.6491935483871", "54", "24", "65.3", "0", "13", "174", "750", "803", "MEC7839451.1 endopeptidase La [Chlamydiota bacterium]", "diamond", "657", "64.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"], [31533707, "PRJNA594101_S_NODE_2756_length_950_cov_4.379704_g2536_i0", "PRJNA594101", "2756", "950", "4.379704", "41.607188", "Rhabdochlamydiaceae bacterium", "2047756", "Bacteria", "Bacteria", "117", "3.97e-29", "", "NR", "HNA63020.1", "2047756", "g2536", "i0", "70.4", "0.224210526315789", "71", "21", "22.4", "0", "488", "700", "4", "74", "HNA63020.1 hypothetical protein [Rhabdochlamydiaceae bacterium]", "diamond", "213", "117", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Candidatus Rhabdochlamydiaceae", null, "Rhabdochlamydiaceae bacterium"], [31628371, "PRJNA594101_S_NODE_52376_length_247_cov_0.885057_g52074_i0", "PRJNA594101", "52376", "247", "0.885057", "2.18609079", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "55.1", "1.72e-6", "", "NR", "MCX6990349.1", "2081524", "g52074", "i0", "33.8", "1.88259109311741", "80", "52", "97.2", "1", "245", "6", "464", "542", "MCX6990349.1 hypothetical protein [Chlamydiota bacterium]", "diamond", "465", "55.1", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"], [32514527, "PRJNA594101_S_NODE_12979_length_458_cov_1.625974_g12677_i0", "PRJNA594101", "12979", "458", "1.625974", "7.44696092", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "84", "5.37e-18", "", "NR", "MCP5470423.1", "2047757", "g12677", "i0", "83", "0.307860262008734", "47", "8", "30.8", "0", "2", "142", "13", "59", "MCP5470423.1 DUF2039 domain-containing protein [Chlamydiales bacterium]", "diamond", "141", "84", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [32671818, "PRJNA594101_S_NODE_11340_length_488_cov_7.703614_g11039_i0", "PRJNA594101", "11340", "488", "7.703614", "37.59363632", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "146", "1.86e-41", "", "NR", "MCP5470421.1", "2047757", "g11039", "i0", "52.3", "1.84426229508197", "151", "66", "91.6", "2", "484", "38", "11", "157", "MCP5470421.1 hypothetical protein [Chlamydiales bacterium]", "diamond", "900", "146", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"]], "truncated": false, "filtered_table_rows_count": 21, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA594101", "p2": "Chlamydiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA594101&tax_phylum=Chlamydiota", "results": [{"value": "PRJNA594101", "label": "PRJNA594101", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA594101&tax_phylum=Chlamydiota", "results": [{"value": "diamond", "label": "diamond", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA594101&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA594101&tax_phylum=Chlamydiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA594101&tax_phylum=Chlamydiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA594101&tax_phylum=Chlamydiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA594101&tax_phylum=Chlamydiota&tax_clade=PVC+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA594101&tax_phylum=Chlamydiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA594101&tax_phylum=Chlamydiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA594101&tax_phylum=Chlamydiota", "results": [{"value": "Chlamydiota", "label": "Chlamydiota", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA594101", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 435.2319589997933}