{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA572587\" and tax_phylum = \"Thermodesulfobacteriota\"", "rows": [[23511577, "PRJNA572587_P_NODE_7939_length_431_cov_1.641361_g7614_i0", "PRJNA572587", "7939", "431", "1.641361", "7.07426591", "Desulfopila sp. IMCC35", "2212462", "Bacteria", "Bacteria", "69.7", "1.18e-10", "", "NR", "WP_136814176.1", "2569542", "g7614", "i0", "72.9", "0.334106728538283", "48", "13", "33.4", "0", "158", "15", "1086", "1133", "WP_136814176.1 isocitrate dehydrogenase kinase/phosphatase AceK regulatory subunit [Desulfopila sp. IMCC35006]", "diamond", "144", "69.7", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobulbia", "Desulfobulbales", "Desulfocapsaceae", "Desulfopila", "Desulfopila sp. IMCC35006"], [24784903, "PRJNA572587_P_NODE_16640_length_280_cov_36.805195_g16312_i0", "PRJNA572587", "16640", "280", "36.805195", "103.054546", "Thermodesulfobacteriota bacterium", "2202153", "Bacteria", "Bacteria", "105", "3.669999999999999e-24", "", "NR", "MEW6664108.1", "2202153", "g16312", "i0", "58.3", "0.9", "84", "35", "90", "0", "24", "275", "194", "277", "MEW6664108.1 HsdR family type I site-specific deoxyribonuclease [Thermodesulfobacteriota bacterium]", "diamond", "252", "105", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", null, null, null, null, "Thermodesulfobacteriota bacterium"], [29321514, "PRJNA572587_P_NODE_35809_length_184_cov_4.237037_g35481_i0", "PRJNA572587", "35809", "184", "4.237037", "7.79614808", "Caldimicrobium sp.", "2024963", "Bacteria", "Bacteria", "93.6", "5.14e-21", "", "NR", "NAZ30913.1", "2024963", "g35481", "i0", "93.6", "0.766304347826087", "47", "3", "76.6", "0", "2", "142", "273", "319", "NAZ30913.1 tRNA pseudouridine(55) synthase TruB [Caldimicrobium sp.]", "diamond", "141", "93.6", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Thermodesulfobacteria", "Thermodesulfobacteriales", "Thermodesulfobacteriaceae", "Caldimicrobium", "Caldimicrobium sp."], [29510908, "PRJNA572587_P_NODE_34970_length_186_cov_21.854015_g34642_i0", "PRJNA572587", "34970", "186", "21.854015", "40.6484679", "Thermodesulfobacterium commune", "1741", "Bacteria", "Bacteria", "43.9", "0.00335", "", "NR", "WP_038062177.1", "1741", "g34642", "i0", "94.1", "0.274193548387097", "17", "1", "27.4", "0", "111", "161", "1", "17", "WP_038062177.1 hypothetical protein [Thermodesulfobacterium commune]", "diamond", "51", "43.9", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Thermodesulfobacteria", "Thermodesulfobacteriales", "Thermodesulfobacteriaceae", "Thermodesulfobacterium", "Thermodesulfobacterium commune"], [31817829, "PRJNA572587_P_NODE_6837_length_470_cov_16.479810_g6513_i0", "PRJNA572587", "6837", "470", "16.47981", "77.455107", "Syntrophales bacterium", "2928017", "Bacteria", "Bacteria", "55.8", "1.09e-5", "", "NR", "HUH65452.1", "2928017", "g6513", "i0", "43.5", "2.55957446808511", "62", "35", "39.6", "0", "267", "452", "163", "224", "HUH65452.1 PAS domain S-box protein [Syntrophales bacterium]", "diamond", "1203", "55.8", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Syntrophia", "Syntrophales", null, null, "Syntrophales bacterium"], [31849474, "PRJNA572587_P_NODE_1237_length_1110_cov_44.342130_g1126_i0", "PRJNA572587", "1237", "1110", "44.34213", "492.197643", "Desulfocurvus vexinensis", "399548", "Bacteria", "Bacteria", "55.1", "8.87e-6", "", "NR", "WP_028588107.1", "399548", "g1126", "i0", "60", "0.362162162162162", "35", "14", "9.5", "0", "994", "1098", "5", "39", "WP_028588107.1 RNA recognition motif domain-containing protein [Desulfocurvus vexinensis]", "diamond", "402", "55.1", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Desulfocurvus", "Desulfocurvus vexinensis"], [32197633, "PRJNA572587_P_NODE_12438_length_331_cov_1.741135_g12110_i0", "PRJNA572587", "12438", "331", "1.741135", "5.76315685", "Desulfobacteria bacterium", "3024420", "Bacteria", "Bacteria", "57.8", "9.69e-8", "", "NR", "HEX3016161.1", "3024420", "g12110", "i0", "52.3", "0.779456193353474", "44", "21", "39.9", "0", "194", "325", "7", "50", "HEX3016161.1 ribosomal protein S18-alanine N-acetyltransferase [Desulfobacteria bacterium]", "diamond", "258", "57.8", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", null, null, null, "Desulfobacteria bacterium"], [32703072, "PRJNA572587_P_NODE_27220_length_214_cov_5.369697_g26892_i0", "PRJNA572587", "27220", "214", "5.369697", "11.49115158", "Desulfobacteria bacterium", "3024420", "Bacteria", "Bacteria", "93.2", "7.340000000000001e-21", "", "NR", "HEX3015158.1", "3024420", "g26892", "i0", "80", "0.771028037383178", "55", "11", "77.1", "0", "184", "20", "15", "69", "HEX3015158.1 phosphate ABC transporter permease subunit PstC [Desulfobacteria bacterium]", "diamond", "165", "93.2", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", null, null, null, "Desulfobacteria bacterium"], [32797412, "PRJNA572587_P_NODE_36380_length_182_cov_18.165414_g36052_i0", "PRJNA572587", "36380", "182", "18.165414", "33.06105348", "Caldimicrobium sp.", "2024963", "Bacteria", "Bacteria", "57.8", "1.88e-8", "", "NR", "MFN4132682.1", "2024963", "g36052", "i0", "77.4", "0.510989010989011", "31", "7", "51.1", "0", "86", "178", "3", "33", "MFN4132682.1 RNA-guided endonuclease TnpB family protein [Caldimicrobium sp.]", "diamond", "93", "57.8", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Thermodesulfobacteria", "Thermodesulfobacteriales", "Thermodesulfobacteriaceae", "Caldimicrobium", "Caldimicrobium sp."]], "truncated": false, "filtered_table_rows_count": 9, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA572587", "p2": "Thermodesulfobacteriota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA572587&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "PRJNA572587", "label": "PRJNA572587", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Thermodesulfobacteriota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA572587&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "diamond", "label": "diamond", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA572587&tax_phylum=Thermodesulfobacteriota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA572587&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA572587&tax_phylum=Thermodesulfobacteriota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA572587&tax_phylum=Thermodesulfobacteriota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA572587&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA572587&tax_phylum=Thermodesulfobacteriota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA572587&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Thermodesulfobacteriota", "label": "Thermodesulfobacteriota", "count": 9, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA572587", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 411.14369299975806}