{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA558770\" and tax_clade = \"Methanomada group\"", "rows": [[26871841, "PRJNA558770_P_NODE_273381_length_234_cov_1.844221_g271376_i0", "PRJNA558770", "273381", "234", "1.844221", "4.31547714", "Methanobacterium", "2160", "Archaea", "Archaea", "50.1", "6.98e-5", "", "NR", "WP_100907503.1", "2160", "g271376", "i0", "95.8", "1.84615384615385", "24", "1", "30.8", "0", "3", "74", "213", "236", "WP_100907503.1 MULTISPECIES: SagB/ThcOx family dehydrogenase [Methanobacterium]", "diamond", "432", "50.4", "0.994047619047619", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", null], [26997855, "PRJNA558770_P_NODE_221062_length_234_cov_3.060302_g219057_i0", "PRJNA558770", "221062", "234", "3.060302", "7.16110668", "Methanobacterium", "2160", "Archaea", "Archaea", "51.2", "3.38e-5", "", "NR", "WP_232728046.1", "2160", "g219057", "i0", "95.8", "2.46153846153846", "24", "1", "30.8", "0", "74", "3", "502", "525", "WP_232728046.1 MULTISPECIES: PEP/pyruvate-binding domain-containing protein [Methanobacterium]", "diamond", "576", "51.2", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", null], [27300168, "PRJNA558770_P_NODE_193623_length_234_cov_4.035176_g191618_i0", "PRJNA558770", "193623", "234", "4.035176", "9.44231184", "Methanobacterium spitsbergense", "2874285", "Archaea", "Archaea", "48.1", "4.25e-4", "", "NR", "WP_223792207.1", "2874285", "g191618", "i0", "100", "0.294871794871795", "23", "0", "29.5", "0", "7", "75", "73", "95", "WP_223792207.1 CHASE4 domain-containing protein [Methanobacterium spitsbergense]", "diamond", "69", "48.1", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium spitsbergense"], [27346033, "PRJNA558770_P_NODE_236963_length_234_cov_2.618090_g234958_i0", "PRJNA558770", "236963", "234", "2.61809", "6.1263306", "Methanobacterium", "2160", "Archaea", "Archaea", "51.2", "3.22e-5", "", "NR", "WP_281774230.1", "2162", "g234958", "i0", "100", "1.23076923076923", "24", "0", "30.8", "0", "161", "232", "57", "80", "WP_281774230.1 hypothetical protein [Methanobacterium formicicum]", "diamond", "288", "51.2", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium formicicum"], [27931726, "PRJNA558770_P_NODE_14825_length_499_cov_8.689655_g13075_i0", "PRJNA558770", "14825", "499", "8.689655", "43.36137845", "Methanobrevibacter sp.", "66852", "Archaea", "Archaea", "53.9", "1.01e-5", "", "NR", "MBO7694409.1", "66852", "g13075", "i0", "50", "1.03406813627255", "44", "22", "26.5", "0", "363", "494", "25", "68", "MBO7694409.1 DUF3310 domain-containing protein [Methanobrevibacter sp.]", "diamond", "516", "53.9", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [28278813, "PRJNA558770_P_NODE_127066_length_234_cov_8.417085_g125061_i0", "PRJNA558770", "127066", "234", "8.417085", "19.6959789", "Methanobacterium spitsbergense", "2874285", "Archaea", "Archaea", "43.9", "0.0123", "", "NR", "MBZ2166225.1", "2874285", "g125061", "i0", "88", "0.320512820512821", "25", "3", "32.1", "0", "2", "76", "188", "212", "MBZ2166225.1 30S ribosomal protein S3 [Methanobacterium spitsbergense]", "diamond", "75", "43.9", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium spitsbergense"], [28563332, "PRJNA558770_P_NODE_281167_length_234_cov_1.718593_g279162_i0", "PRJNA558770", "281167", "234", "1.718593", "4.02150762", "Methanobacterium spitsbergense", "2874285", "Archaea", "Archaea", "80.5", "2.28e-16", "", "NR", "WP_223790895.1", "2874285", "g279162", "i0", "62.3", "0.987179487179487", "77", "6", "98.7", "1", "1", "231", "115", "168", "WP_223790895.1 triose-phosphate isomerase [Methanobacterium spitsbergense]", "diamond", "231", "80.5", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium spitsbergense"], [28658076, "PRJNA558770_P_NODE_265907_length_234_cov_1.984925_g263902_i0", "PRJNA558770", "265907", "234", "1.984925", "4.6447245", "Methanobacterium sp. SMA-27", "1495336", "Archaea", "Archaea", "52.8", "9.42e-6", "", "NR", "WP_048191139.1", "1495336", "g263902", "i0", "100", "0.628205128205128", "24", "0", "30.8", "0", "73", "2", "224", "247", "WP_048191139.1 methanogenesis marker 3 protein [Methanobacterium sp. SMA-27]", "diamond", "147", "52.8", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp. SMA-27"], [28784087, "PRJNA558770_P_NODE_335227_length_233_cov_4.924242_g333222_i0", "PRJNA558770", "335227", "233", "4.924242", "11.47348386", "Methanobacterium spitsbergense", "2874285", "Archaea", "Archaea", "51.2", "1.59e-5", "", "NR", "WP_223791761.1", "2874285", "g333222", "i0", "96", "0.321888412017167", "25", "1", "32.2", "0", "233", "159", "150", "174", "WP_223791761.1 serine O-acetyltransferase [Methanobacterium spitsbergense]", "diamond", "75", "51.2", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium spitsbergense"], [28924401, "PRJNA558770_P_NODE_165768_length_234_cov_5.407035_g163763_i0", "PRJNA558770", "165768", "234", "5.407035", "12.6524619", "Methanobacterium", "2160", "Archaea", "Archaea", "50.4", "2.2e-5", "", "NR", "WP_048082446.1", "2160", "g163763", "i0", "92", "0.961538461538462", "25", "2", "32.1", "0", "2", "76", "8", "32", "WP_048082446.1 MULTISPECIES: hypothetical protein [Methanobacterium]", "diamond", "225", "50.4", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", null], [29289333, "PRJNA558770_P_NODE_218309_length_234_cov_3.140704_g216304_i0", "PRJNA558770", "218309", "234", "3.140704", "7.34924736", "Methanobacterium spitsbergense", "2874285", "Archaea", "Archaea", "47", "9.85e-4", "", "NR", "WP_223792325.1", "2874285", "g216304", "i0", "100", "0.307692307692308", "24", "0", "30.8", "0", "161", "232", "280", "303", "WP_223792325.1 hypothetical protein [Methanobacterium spitsbergense]", "diamond", "72", "47", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium spitsbergense"], [29478605, "PRJNA558770_P_NODE_276930_length_234_cov_1.783920_g274925_i0", "PRJNA558770", "276930", "234", "1.78392", "4.1743728", "Methanobacterium sp.", "2164", "Archaea", "Archaea", "59.3", "4.56e-8", "", "NR", "MCC7562881.1", "2164", "g274925", "i0", "35.7", "1.61538461538462", "126", "32", "98.7", "1", "233", "3", "33", "158", "MCC7562881.1 histidinol dehydrogenase [Methanobacterium sp.]", "diamond", "378", "59.3", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp."], [29492890, "PRJNA558770_P_NODE_254630_length_234_cov_2.206030_g252625_i0", "PRJNA558770", "254630", "234", "2.20603", "5.1621102", "Methanobrevibacter", "2172", "Archaea", "Archaea", "52", "1.39e-5", "", "NR", "MBE6499899.1", "190975", "g252625", "i0", "92", "1.91025641025641", "25", "2", "32.1", "0", "75", "1", "154", "178", "MBE6499899.1 tRNA (adenine-N1)-methyltransferase [Methanobrevibacter thaueri]", "diamond", "447", "52", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter thaueri"], [30015840, "PRJNA558770_P_NODE_257631_length_234_cov_2.145729_g255626_i0", "PRJNA558770", "257631", "234", "2.145729", "5.02100586", "Methanobacterium sp. SMA-27", "1495336", "Archaea", "Archaea", "51.2", "3.32e-5", "", "NR", "WP_048190908.1", "1495336", "g255626", "i0", "100", "0.307692307692308", "24", "0", "30.8", "0", "2", "73", "52", "75", "WP_048190908.1 Ig-like domain-containing protein [Methanobacterium sp. SMA-27]", "diamond", "72", "51.2", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp. SMA-27"], [30458461, "PRJNA558770_P_NODE_225913_length_234_cov_2.919598_g223908_i0", "PRJNA558770", "225913", "234", "2.919598", "6.83185932", "Methanobacterium spitsbergense", "2874285", "Archaea", "Archaea", "47.8", "4.09e-4", "", "NR", "WP_223790354.1", "2874285", "g223908", "i0", "91.7", "0.307692307692308", "24", "2", "30.8", "0", "3", "74", "20", "43", "WP_223790354.1 potassium channel family protein [Methanobacterium spitsbergense]", "diamond", "72", "47.8", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium spitsbergense"], [30503756, "PRJNA558770_P_NODE_213613_length_234_cov_3.291457_g211608_i0", "PRJNA558770", "213613", "234", "3.291457", "7.70200938", "root", "1", "Root_unresolved", "Root_unresolved", "46.6", "6.77e-4", "", "NR", "MDO5819857.1", "66852", "g211608", "i0", "87", "1.82051282051282", "23", "3", "29.5", "0", "164", "232", "67", "89", "MDO5819857.1 VWA domain-containing protein [Methanobrevibacter sp.]", "diamond", "426", "47", "0.991489361702128", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [30679045, "PRJNA558770_P_NODE_221553_length_234_cov_3.045226_g219548_i0", "PRJNA558770", "221553", "234", "3.045226", "7.12582884", "Methanobacterium spitsbergense", "2874285", "Archaea", "Archaea", "58.9", "6.17e-8", "", "NR", "WP_223790648.1", "2874285", "g219548", "i0", "56", "0.961538461538462", "75", "18", "96.2", "1", "233", "9", "300", "359", "WP_223790648.1 ABC transporter permease [Methanobacterium spitsbergense]", "diamond", "225", "58.9", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium spitsbergense"], [30774163, "PRJNA558770_P_NODE_210994_length_234_cov_3.376884_g208989_i0", "PRJNA558770", "210994", "234", "3.376884", "7.90190856", "Methanobacterium sp. SMA-27", "1495336", "Archaea", "Archaea", "52.8", "7.59e-6", "", "NR", "WP_231551413.1", "1495336", "g208989", "i0", "100", "0.307692307692308", "24", "0", "30.8", "0", "3", "74", "216", "239", "WP_231551413.1 hypothetical protein [Methanobacterium sp. SMA-27]", "diamond", "72", "52.8", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp. SMA-27"], [31058725, "PRJNA558770_P_NODE_282275_length_234_cov_1.698492_g280270_i0", "PRJNA558770", "282275", "234", "1.698492", "3.97447128", "Methanobrevibacter sp.", "66852", "Archaea", "Archaea", "45.1", "0.00263", "", "NR", "MBO7732821.1", "66852", "g280270", "i0", "70.8", "0.307692307692308", "24", "7", "30.8", "0", "73", "2", "88", "111", "MBO7732821.1 HNH endonuclease [Methanobrevibacter sp.]", "diamond", "72", "45.1", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [31325232, "PRJNA558770_P_NODE_265435_length_234_cov_1.994975_g263430_i0", "PRJNA558770", "265435", "234", "1.994975", "4.6682415", "root", "1", "Root_unresolved", "Root_unresolved", "43.9", "0.0126", "", "NR", "WP_286009474.1", "190976", "g263430", "i0", "68", "0.948717948717949", "25", "8", "32.1", "0", "234", "160", "80", "104", "WP_286009474.1 glycosyltransferase [Methanobrevibacter woesei]", "diamond", "222", "43.9", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter woesei"], [31564531, "PRJNA558770_P_NODE_220876_length_234_cov_3.065327_g218871_i0", "PRJNA558770", "220876", "234", "3.065327", "7.17286518", "Methanobacterium sp. SMA-27", "1495336", "Archaea", "Archaea", "45.8", "0.00268", "", "NR", "WP_048190747.1", "1495336", "g218871", "i0", "91.3", "0.294871794871795", "23", "2", "29.5", "0", "71", "3", "70", "92", "WP_048190747.1 hypothetical protein [Methanobacterium sp. SMA-27]", "diamond", "69", "45.8", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp. SMA-27"], [32242985, "PRJNA558770_P_NODE_151478_length_234_cov_6.311558_g149473_i0", "PRJNA558770", "151478", "234", "6.311558", "14.76904572", "Methanobacterium", "2160", "Archaea", "Archaea", "48.5", "3.06e-4", "", "NR", "WP_052375737.1", "2160", "g149473", "i0", "87.5", "0.615384615384615", "24", "3", "30.8", "0", "232", "161", "1365", "1388", "WP_052375737.1 MULTISPECIES: PAS domain S-box protein [Methanobacterium]", "diamond", "144", "48.5", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", null], [32481930, "PRJNA558770_P_NODE_321319_length_233_cov_8.515152_g319314_i0", "PRJNA558770", "321319", "233", "8.515152", "19.84030416", "Methanobacterium lacus", "877455", "Archaea", "Archaea", "46.6", "9.04e-4", "", "NR", "WP_013645333.1", "877455", "g319314", "i0", "83.3", "0.630901287553648", "24", "4", "30.9", "0", "160", "231", "57", "80", "WP_013645333.1 potassium-transporting ATPase subunit KdpC [Methanobacterium lacus]", "diamond", "147", "46.6", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium lacus"], [32545241, "PRJNA558770_P_NODE_128399_length_234_cov_8.276382_g126394_i0", "PRJNA558770", "128399", "234", "8.276382", "19.36673388", "Methanobacterium sp. SMA-27", "1495336", "Archaea", "Archaea", "46.2", "0.00199", "", "NR", "WP_052374109.1", "1495336", "g126394", "i0", "88", "0.641025641025641", "25", "3", "32.1", "0", "233", "159", "619", "643", "WP_052374109.1 PAS domain S-box protein [Methanobacterium sp. SMA-27]", "diamond", "150", "46.2", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp. SMA-27"], [32639339, "PRJNA558770_P_NODE_260060_length_234_cov_2.095477_g258055_i0", "PRJNA558770", "260060", "234", "2.095477", "4.90341618", "Methanobacterium sp.", "2164", "Archaea", "Archaea", "82.8", "2.56e-16", "", "NR", "MCC7564526.1", "2164", "g258055", "i0", "62.3", "1.97435897435897", "77", "29", "98.7", "0", "233", "3", "63", "139", "MCC7564526.1 PAS domain S-box protein [Methanobacterium sp.]", "diamond", "462", "82.8", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp."]], "truncated": false, "filtered_table_rows_count": 25, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA558770", "p2": "Methanomada group"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA558770&tax_clade=Methanomada+group", "results": [{"value": "PRJNA558770", "label": "PRJNA558770", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_clade=Methanomada+group", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA558770&tax_clade=Methanomada+group", "results": [{"value": "diamond", "label": "diamond", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA558770&tax_clade=Methanomada+group", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA558770&tax_clade=Methanomada+group", "results": [{"value": "Archaea", "label": "Archaea", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA558770&tax_clade=Methanomada+group&tax_superkingdom=Archaea", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA558770&tax_clade=Methanomada+group", "results": [{"value": "Methanomada group", "label": "Methanomada group", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA558770", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA558770&tax_clade=Methanomada+group", "results": [{"value": "Methanobacteriati", "label": "Methanobacteriati", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA558770&tax_clade=Methanomada+group&tax_kingdom=Methanobacteriati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA558770&tax_clade=Methanomada+group", "results": [{"value": "Methanobacteriota", "label": "Methanobacteriota", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA558770&tax_clade=Methanomada+group&tax_phylum=Methanobacteriota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 261.56961499509634}