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"0.832369942196532", "24", "3", "41.6", "0", "4", "75", "15", "38", "GAA6988816.1 hypothetical protein Kyoto211A_4340 [Helicobacter pylori]", "diamond", "144", "43.5", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [29508950, "PRJNA529241_P_NODE_429090_length_164_cov_6.346457_g426768_i0", "PRJNA529241", "429090", "164", "6.346457", "10.40818948", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "50.4", "1.94e-6", "", "NR", "GAA6820949.1", "210", "g426768", "i0", "77.8", "0.49390243902439", "27", "6", "49.4", "0", "1", "81", "16", "42", "GAA6820949.1 hypothetical protein Kyoto200A_3790 [Helicobacter pylori]", "diamond", "81", "50.4", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [29572038, 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"79", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter coli"], [29744955, "PRJNA529241_P_NODE_81250_length_237_cov_7.010000_g78928_i0", "PRJNA529241", "81250", "237", "7.01", "16.6137", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "66.6", "2.4e-12", "", "NR", "MCH3868474.1", "197", "g78928", "i0", "100", "0.835443037974684", "33", "0", "41.8", "0", "100", "2", "49", "81", "MCH3868474.1 hypothetical protein [Campylobacter jejuni]", "diamond", "198", "66.6", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter jejuni"], [29761469, "PRJNA529241_P_NODE_368051_length_173_cov_2.691176_g365729_i0", "PRJNA529241", "368051", "173", "2.691176", "4.65573448", "Campylobacter ureolyticus", "827", "Bacteria", "Bacteria", "49.3", "7.03e-5", "", "NR", "WP_258299313.1", "827", "g365729", "i0", "92", "0.433526011560694", "25", "2", "43.4", "0", "2", "76", "102", "126", "WP_258299313.1 hypothetical protein, partial [Campylobacter ureolyticus]", "diamond", "75", "49.3", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter ureolyticus"], [29888109, "PRJNA529241_P_NODE_48071_length_294_cov_5.774319_g45749_i0", "PRJNA529241", "48071", "294", "5.774319", "16.97649786", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "44.7", "0.00284", "", "NR", "GAA9106824.1", "210", "g45749", "i0", "81.8", "0.224489795918367", "22", "4", "22.4", "0", "268", "203", "1", "22", "GAA9106824.1 hypothetical protein Kyoto184A_09650 [Helicobacter pylori]", "diamond", "66", "44.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30077247, "PRJNA529241_P_NODE_149952_length_185_cov_18.060811_g147630_i0", "PRJNA529241", "149952", "185", "18.060811", "33.41250035", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "76.6", "1.07e-16", "", "NR", "GAA6775601.1", "210", "g147630", "i0", "82.2", "0.72972972972973", "45", "7", "71.4", "1", "24", "155", "1", "45", "GAA6775601.1 hypothetical protein Kyoto199A_4750 [Helicobacter pylori]", "diamond", "135", "76.6", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30077333, "PRJNA529241_P_NODE_433752_length_163_cov_0.928571_g431430_i0", "PRJNA529241", "433752", "163", "0.928571", "1.51357073", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "43.5", "8.26e-4", "", "NR", "GAA9062696.1", "210", "g431430", "i0", "59", "0.717791411042945", "39", "15", "71.8", "1", "6", "122", "8", "45", "GAA9062696.1 hypothetical protein Kyoto184A_05270 [Helicobacter pylori]", 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"Bacteria", "43.1", "9.75e-4", "", "NR", "GAA8706462.1", "210", "g405490", "i0", "65.4", "0.453488372093023", "26", "9", "45.3", "0", "149", "72", "23", "48", "GAA8706462.1 hypothetical protein Kyoto145A_3610 [Helicobacter pylori]", "diamond", "78", "43.1", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30425477, "PRJNA529241_P_NODE_433513_length_163_cov_1.166667_g431191_i0", "PRJNA529241", "433513", "163", "1.166667", "1.90166721", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "57", "7.94e-9", "", "NR", "GAA9044369.1", "210", "g431191", "i0", "61.5", "0.717791411042945", "39", "15", "71.8", "0", "47", "163", "56", "94", "GAA9044369.1 hypothetical protein Kyoto184A_02810 [Helicobacter pylori]", "diamond", "117", "57", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30425523, "PRJNA529241_P_NODE_580873_length_150_cov_3.424779_g578551_i0", "PRJNA529241", "580873", "150", "3.424779", "5.1371685", "Campylobacterota bacterium", "2026809", "Bacteria", "Bacteria", "87", "1.46e-20", "", "NR", "GHS90013.1", "2026809", "g578551", "i0", "77.8", "1.26", "63", "0", "98", "1", "149", "3", "41", "103", "GHS90013.1 hypothetical protein FACS189487_11250 [Campylobacterota bacterium]", "diamond", "189", "87", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", null, null, null, null, "Campylobacterota bacterium"], [30519789, "PRJNA529241_P_NODE_208473_length_173_cov_5.823529_g206151_i0", "PRJNA529241", "208473", "173", "5.823529", "10.07470517", "Helicobacter typhlonius", "76936", "Bacteria", "Bacteria", "52", "3.11e-7", "", "NR", "WP_334090172.1", "76936", "g206151", "i0", "100", "1.30057803468208", "25", "0", "43.4", "0", "172", "98", "19", "43", "WP_334090172.1 30S ribosomal protein S13, partial [Helicobacter 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"3.39e-8", "", "NR", "GAA8993091.1", "210", "g173132", "i0", "95.7", "0.396551724137931", "23", "1", "39.7", "0", "3", "71", "23", "45", "GAA8993091.1 hypothetical protein Kyoto181A_6120 [Helicobacter pylori]", "diamond", "69", "54.3", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30772744, "PRJNA529241_P_NODE_405334_length_172_cov_3.266667_g403012_i0", "PRJNA529241", "405334", "172", "3.266667", "5.61866724", "Campylobacterales bacterium", "2268180", "Bacteria", "Bacteria", "46.6", "6.31e-4", "", "NR", "MCX6062309.1", "2268180", "g403012", "i0", "31.2", "3.24418604651163", "93", "26", "95.9", "1", "165", "1", "250", "342", "MCX6062309.1 efflux transporter outer membrane subunit [Campylobacterales bacterium]", "diamond", "558", "46.6", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", null, null, "Campylobacterales bacterium"], [31198073, "PRJNA529241_P_NODE_443515_length_159_cov_1.278689_g441193_i0", "PRJNA529241", "443515", "159", "1.278689", "2.03311551", "root", "1", "Root_unresolved", "Root_unresolved", "46.2", "3.59e-4", "", "NR", "GAA9250408.1", "210", "g441193", "i0", "57.6", "21.1698113207547", "33", "14", "62.3", "0", "59", "157", "10", "42", "GAA9250408.1 hypothetical protein Kyoto199A_2030 [Helicobacter pylori]", "diamond", "3366", "46.6", "0.991416309012876", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [31626017, "PRJNA529241_P_NODE_313136_length_173_cov_3.345588_g310814_i0", "PRJNA529241", "313136", "173", "3.345588", "5.78786724", "Campylobacter sp. 19-13652", "2840180", "Bacteria", "Bacteria", "50.1", "3.71e-5", "", "NR", "WP_221253874.1", "2840180", "g310814", "i0", "100", "24.8323699421965", "22", "0", "38.2", "0", "74", "9", "176", "197", "WP_221253874.1 NAD-dependent epimerase [Campylobacter sp. 19-13652]", "diamond", "4296", "50.1", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter sp. 19-13652"], [31657481, "PRJNA529241_P_NODE_149277_length_186_cov_2.879195_g146955_i0", "PRJNA529241", "149277", "186", "2.879195", "5.3553027", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "47.4", "2.34e-4", "", "NR", "GAA9039287.1", "210", "g146955", "i0", "71.4", "0.903225806451613", "28", "8", "45.2", "0", "184", "101", "48", "75", "GAA9039287.1 hypothetical protein Kyoto184A_01650 [Helicobacter pylori]", "diamond", "168", "47.4", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [31721006, "PRJNA529241_P_NODE_435997_length_162_cov_1.248000_g433675_i0", "PRJNA529241", "435997", "162", "1.248", "2.02176", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "41.2", "0.00488", "", "NR", "GAA9085911.1", "210", "g433675", "i0", "54.8", "0.574074074074074", "31", "14", "57.4", "0", "135", "43", "13", "43", "GAA9085911.1 hypothetical protein Kyoto184A_07950 [Helicobacter pylori]", "diamond", "93", "41.2", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [31752434, "PRJNA529241_P_NODE_118137_length_204_cov_1.167665_g115815_i0", "PRJNA529241", "118137", "204", "1.167665", "2.3820366", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "41.2", "0.013", "", "NR", "GAA6904105.1", "210", "g115815", "i0", "52.6", "0.558823529411765", "38", "18", "55.9", "0", "12", "125", "34", "71", "GAA6904105.1 hypothetical protein Kyoto207A_2120 [Helicobacter pylori]", "diamond", "114", "41.2", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [31784034, "PRJNA529241_P_NODE_139997_length_191_cov_1.266234_g137675_i0", "PRJNA529241", "139997", "191", "1.266234", "2.41850694", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "40", "0.032", "", "NR", "GAA9197671.1", "210", "g137675", "i0", "84.2", "0.298429319371728", "19", "3", "29.8", "0", "82", "138", "9", "27", "GAA9197671.1 hypothetical protein Kyoto193A_4420 [Helicobacter pylori]", "diamond", "57", "40", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [31878948, "PRJNA529241_P_NODE_305697_length_173_cov_3.441176_g303375_i0", "PRJNA529241", "305697", "173", "3.441176", "5.95323448", "Arcobacter sp.", "1872629", "Bacteria", "Bacteria", "43.1", "0.00676", "", "NR", "PIF04336.1", "1872629", "g303375", "i0", "77.3", "0.780346820809249", "22", "5", "38.2", "0", "67", "2", "125", "146", "PIF04336.1 MAG: hypothetical protein CSA86_02190 [Arcobacter sp.]", "diamond", "135", "43.1", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", "Arcobacter", "Arcobacter sp."], [32037461, "PRJNA529241_P_NODE_67098_length_256_cov_16.771689_g64776_i0", "PRJNA529241", "67098", "256", "16.771689", "42.93552384", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "53.1", "1.03e-6", "", "NR", "GAA9038855.1", "210", "g64776", "i0", "100", "0.5390625", "23", "0", "27", "0", "255", "187", "22", "44", "GAA9038855.1 hypothetical protein Kyoto184A_01470 [Helicobacter pylori]", "diamond", "138", "53.1", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32068949, "PRJNA529241_P_NODE_436298_length_162_cov_0.936000_g433976_i0", "PRJNA529241", "436298", "162", "0.936", "1.51632", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "47.4", "1.12e-4", "", "NR", "GAA8908272.1", "210", "g433976", "i0", "53.7", "1.51851851851852", "41", "16", "75.9", "1", "124", "2", "57", "94", "GAA8908272.1 hypothetical protein Kyoto166A_1320 [Helicobacter pylori]", "diamond", "246", "47.4", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32084114, "PRJNA529241_P_NODE_143978_length_189_cov_0.940789_g141656_i0", "PRJNA529241", "143978", "189", "0.940789", "1.77809121", "root", "1", "Root_unresolved", "Root_unresolved", "45.8", "0.00124", "", "NR", "GAA9038731.1", "210", "g141656", "i0", "47.1", "2.42857142857143", "51", "23", "74.6", "2", "177", "37", "33", "83", "GAA9038731.1 hypothetical protein Kyoto184A_01380 [Helicobacter pylori]", "diamond", "459", "46.2", "0.991341991341991", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32337550, "PRJNA529241_P_NODE_266639_length_173_cov_4.088235_g264317_i0", "PRJNA529241", "266639", "173", "4.088235", "7.07264655", "root", "1", "Root_unresolved", "Root_unresolved", "47", "1.01e-4", "", "NR", "WP_341549733.1", "197", "g264317", "i0", "80", "42.0520231213873", "25", "5", "43.4", "0", "76", "2", "20", "44", "WP_341549733.1 reverse transcriptase domain-containing protein, partial [Campylobacter jejuni]", "diamond", "7275", "47.4", "0.991561181434599", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter jejuni"], [32400744, "PRJNA529241_P_NODE_330599_length_173_cov_3.139706_g328277_i0", "PRJNA529241", "330599", "173", "3.139706", "5.43169138", "Bacteria", "2", "Bacteria", "Bacteria", "52.4", "4.92e-6", "", "NR", "GAA8851786.1", "210", "g328277", "i0", "91.7", "1.66473988439306", "24", "2", "41.6", "0", "74", "3", "122", "145", "GAA8851786.1 F0F1 ATP synthase subunit A [Helicobacter pylori]", "diamond", "288", "52.8", "0.992424242424242", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32669623, "PRJNA529241_P_NODE_588100_length_150_cov_1.380531_g585778_i0", "PRJNA529241", "588100", "150", "1.380531", "2.0707965", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "43.9", "3.8e-4", "", "NR", "GAA8706462.1", "210", "g585778", "i0", "44.2", "0.86", "43", "23", "84", "1", "147", "22", "8", "50", "GAA8706462.1 hypothetical protein Kyoto145A_3610 [Helicobacter pylori]", "diamond", "129", "43.9", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"]], "truncated": false, "filtered_table_rows_count": 59, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA529241", "p2": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA529241&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA529241", "label": "PRJNA529241", "count": 59, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA529241&tax_phylum=Campylobacterota", "results": [{"value": "diamond", "label": "diamond", "count": 59, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA529241&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA529241&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 59, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA529241&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA529241&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA529241&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 59, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA529241&tax_phylum=Campylobacterota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA529241&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 59, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA529241", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 253.58234899613308}