{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA492406\" and tax_phylum = \"Bacillota\"", "rows": [[8105744, "PRJNA492406_P_NODE_28407_length_248_cov_0.880000_g28108_i0", "PRJNA492406", "28407", "248", "0.88", "2.1824", "Bacilli bacterium", "1903720", "Bacteria", "Bacteria", "84.7", "3.35e-19", "", "NR", "MCR5349097.1", "1903720", "g28108", "i0", "59.7", "2.35887096774194", "62", "25", "75", "0", "54", "239", "2", "63", "MCR5349097.1 thioredoxin [Bacilli bacterium]", "diamond", "585", "84.7", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", null, null, null, "Bacilli bacterium"], [10656206, "PRJNA492406_P_NODE_23229_length_267_cov_1.927835_g22930_i0", "PRJNA492406", "23229", "267", "1.927835", "5.14731945", "Bacillota", "1239", "Bacteria", "Bacteria", "127", "2.29e-35", "", "NR", "WP_077720530.1", "1471761", "g22930", "i0", "68.5", "8.98876404494382", "89", "28", "100", "0", "1", "267", "10", "98", "WP_077720530.1 nucleoside-diphosphate kinase [Novibacillus thermophilus]", "diamond", "2400", "128", "0.9921875", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Thermoactinomycetaceae", "Novibacillus", "Novibacillus thermophilus"], [23404723, "PRJNA492406_P_NODE_18939_length_288_cov_1.437209_g18640_i0", "PRJNA492406", "18939", "288", "1.437209", "4.13916192", "Bacillaceae", "186817", "Bacteria", "Bacteria", "171", "2.85e-50", "", "NR", "WP_053431525.1", "86665", "g18640", "i0", "89.5", "110.833333333333", "95", "10", "99", "0", "286", "2", "144", "238", "WP_053431525.1 PhoH family protein [Halalkalibacterium halodurans]", "diamond", "31920", "172", "0.994186046511628", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Halalkalibacterium (ex Joshi et al. 2022)", "Halalkalibacterium halodurans"], [26981477, "PRJNA492406_P_NODE_9302_length_402_cov_1.756839_g9003_i0", "PRJNA492406", "9302", "402", "1.756839", "7.06249278", "Bacilli bacterium", "1903720", "Bacteria", "Bacteria", "49.7", "8.66e-4", "", "NR", "MBQ3475494.1", "1903720", "g9003", "i0", "26.1", "1", "134", "95", "100", "2", "1", "402", "2375", "2504", "MBQ3475494.1 InlB B-repeat-containing protein [Bacilli bacterium]", "diamond", "402", "49.7", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", null, null, null, "Bacilli bacterium"], [27487215, "PRJNA492406_P_NODE_21903_length_274_cov_1.472637_g21604_i0", "PRJNA492406", "21903", "274", "1.472637", "4.03502538", "Cohnella herbarum", "2728023", "Bacteria", "Bacteria", "52.4", "2.04e-5", "", "NR", "WP_169283505.1", "2728023", "g21604", "i0", "41.3", "0.875912408759124", "80", "45", "87.6", "1", "30", "269", "11", "88", "WP_169283505.1 pyridoxal phosphate-dependent aminotransferase [Cohnella herbarum]", "diamond", "240", "52.4", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Paenibacillaceae", "Cohnella", "Cohnella herbarum"], [27708662, "PRJNA492406_P_NODE_18504_length_290_cov_1.322581_g18205_i0", "PRJNA492406", "18504", "290", "1.322581", "3.8354849", "Clostridia bacterium", "2044939", "Bacteria", "Bacteria", "42.7", "0.0438", "", "NR", "MBQ7948540.1", "2044939", "g18205", "i0", "52.2", "0.475862068965517", "46", "19", "47.6", "1", "26", "163", "13", "55", "MBQ7948540.1 leucine-rich repeat domain-containing protein [Clostridia bacterium]", "diamond", "138", "42.7", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", null, null, null, "Clostridia bacterium"], [28213145, "PRJNA492406_P_NODE_24026_length_263_cov_1.600000_g23727_i0", "PRJNA492406", "24026", "263", "1.6", "4.208", "Paenibacillus sp. 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"77", "WP_415427217.1 hypothetical protein, partial [Staphylococcus borealis]", "diamond", "231", "110", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Staphylococcaceae", "Staphylococcus", "Staphylococcus borealis"], [28466184, "PRJNA492406_P_NODE_9286_length_402_cov_2.340426_g8987_i0", "PRJNA492406", "9286", "402", "2.340426", "9.40851252", "Paenibacillus naphthalenovorans", "162209", "Bacteria", "Bacteria", "67.4", "5.4e-10", "", "NR", "WP_062410505.1", "162209", "g8987", "i0", "37.9", "1.04477611940298", "140", "74", "94.8", "5", "401", "21", "78", "217", "WP_062410505.1 S-layer homology domain-containing protein [Paenibacillus naphthalenovorans]", "diamond", "420", "67.4", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Paenibacillaceae", "Paenibacillus", "Paenibacillus naphthalenovorans"], [28497718, "PRJNA492406_P_NODE_19947_length_284_cov_1.094787_g19648_i0", "PRJNA492406", "19947", "284", "1.094787", "3.10919508", "Dysosmobacter segnis", "2763042", "Bacteria", "Bacteria", "194", "9.46e-60", "", "NR", "WP_187016437.1", "2763042", "g19648", "i0", "100", "0.992957746478873", "94", "0", "99.3", "0", "284", "3", "107", "200", "WP_187016437.1 hypothetical protein [Dysosmobacter segnis]", "diamond", "282", "194", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Oscillospiraceae", "Dysosmobacter", "Dysosmobacter segnis"], [29633840, "PRJNA492406_P_NODE_23250_length_267_cov_1.587629_g22951_i0", "PRJNA492406", "23250", "267", "1.587629", "4.23896943", "Clostridium", "1485", "Bacteria", "Bacteria", "52.8", "1.15e-5", "", "NR", "WP_011721126.1", "1485", "g22951", "i0", "40", "1.4494382022471901", "65", "39", "73", "0", "267", "73", "139", "203", "WP_011721126.1 MULTISPECIES: metal ABC transporter ATP-binding protein [Clostridium]", "diamond", "387", "52.8", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Clostridiaceae", "Clostridium", null], 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"Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Peptostreptococcales", "Anaerovoracaceae", null, "Anaerovoracaceae bacterium"], [30992768, "PRJNA492406_P_NODE_27034_length_250_cov_1.305085_g26735_i0", "PRJNA492406", "27034", "250", "1.305085", "3.2627125", "Dysosmobacter segnis", "2763042", "Bacteria", "Bacteria", "145", "4.89e-42", "", "NR", "WP_187016443.1", "2763042", "g26735", "i0", "100", "0.852", "71", "0", "85.2", "0", "2", "214", "135", "205", "WP_187016443.1 hypothetical protein [Dysosmobacter segnis]", "diamond", "213", "145", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Oscillospiraceae", "Dysosmobacter", "Dysosmobacter segnis"], [31040563, "PRJNA492406_P_NODE_16895_length_304_cov_2.142857_g16596_i0", "PRJNA492406", "16895", "304", "2.142857", "6.51428528", "Bacteria", "2", "Bacteria", "Bacteria", "62.8", "6.19e-9", "", "NR", "HBB72400.1", "41978", "g16596", "i0", "38", "1.66776315789474", "100", "57", "98.7", "1", "302", "3", "201", "295", "HBB72400.1 GTPase [Ruminococcus sp.]", "diamond", "507", "63.2", "0.993670886075949", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Oscillospiraceae", "Ruminococcus", "Ruminococcus sp."], [31514779, "PRJNA492406_P_NODE_6536_length_471_cov_1.354271_g6237_i0", "PRJNA492406", "6536", "471", "1.354271", "6.37861641", "Zhenhengia", "2944196", "Bacteria", "Bacteria", "102", "7.83e-22", "", "NR", "WP_320651479.1", "2763666", "g6237", "i0", "47.1", "9.68152866242038", "104", "52", "66.2", "1", "334", "23", "160", "260", "WP_320651479.1 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein [Zhenhengia yiwuensis]", "diamond", "4560", "102", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Lachnospirales", "Lachnospiraceae", "Zhenhengia", "Zhenhengia yiwuensis"], [31862254, "PRJNA492406_P_NODE_22377_length_272_cov_1.155779_g22078_i0", "PRJNA492406", "22377", "272", "1.155779", "3.14371888", "Bacteria", "2", "Bacteria", "Bacteria", "65.9", "3.76e-10", "", "NR", "MBX6395197.1", "2782694", "g22078", "i0", "47.5", "4.51102941176471", "61", "32", "67.3", "0", "2", "184", "403", "463", "MBX6395197.1 leucyl aminopeptidase [Alicyclobacillaceae bacterium]", "diamond", "1227", "65.9", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Alicyclobacillaceae", null, "Alicyclobacillaceae bacterium"], [32052294, "PRJNA492406_P_NODE_7898_length_432_cov_1.440111_g7599_i0", "PRJNA492406", "7898", "432", "1.440111", "6.22127952", "FCB group", "1783270", "Bacteria", "Bacteria", "50.1", "8.15e-4", "", "NR", "MCI8671821.1", "1903720", "g7599", "i0", "33.9", "4.59722222222222", "59", "39", "41", "0", "178", "2", "1556", "1614", "MCI8671821.1 hypothetical protein [Bacilli bacterium]", "diamond", "1986", "50.1", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", null, null, null, "Bacilli bacterium"], [32605630, "PRJNA492406_P_NODE_7260_length_448_cov_4.037333_g6961_i0", "PRJNA492406", "7260", "448", "4.037333", "18.08725184", "Bacillus cereus group", "86661", "Bacteria", "Bacteria", "49.7", "8.37e-4", "", "NR", "WP_128267372.1", "86661", "g6961", "i0", "27.8", "0.602678571428571", "90", "64", "60.3", "1", "127", "396", "46", "134", "WP_128267372.1 MULTISPECIES: hypothetical protein [Bacillus cereus group]", "diamond", "270", "49.7", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Bacillus", null], [32668523, "PRJNA492406_P_NODE_19500_length_286_cov_1.126761_g19201_i0", "PRJNA492406", "19500", "286", "1.126761", "3.22253646", "Sutcliffiella horikoshii", "79883", "Bacteria", "Bacteria", "73.9", "1.56e-13", "", "NR", "WP_331254646.1", "79883", "g19201", "i0", "60.4", "0.555944055944056", "53", "21", "55.6", "0", "2", "160", "177", "229", "WP_331254646.1 TIGR02206 family membrane protein [Sutcliffiella horikoshii]", "diamond", "159", "73.9", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Sutcliffiella", "Sutcliffiella horikoshii"]], "truncated": false, "filtered_table_rows_count": 22, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA492406", "p2": "Bacillota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492406&tax_phylum=Bacillota", "results": [{"value": "PRJNA492406", "label": "PRJNA492406", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Bacillota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492406&tax_phylum=Bacillota", "results": [{"value": "diamond", "label": "diamond", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA492406&tax_phylum=Bacillota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492406&tax_phylum=Bacillota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492406&tax_phylum=Bacillota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492406&tax_phylum=Bacillota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492406&tax_phylum=Bacillota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492406&tax_phylum=Bacillota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492406&tax_phylum=Bacillota", "results": [{"value": "Bacillota", "label": "Bacillota", "count": 22, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492406", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 346.2305200082483}