{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA492363\" and tax_phylum = \"Bacillota\"", "rows": [[26110653, "PRJNA492363_S_NODE_2701_length_544_cov_2.099379_g1894_i0", "PRJNA492363", "2701", "544", "2.099379", "11.42062176", "Alicyclobacillus", "29330", "Bacteria", "Bacteria", "179", "6.14e-52", "", "NR", "WP_076347838.1", "252246", "g1894", "i0", "57.9", "7.19117647058824", "145", "61", "80", "0", "3", "437", "184", "328", "WP_076347838.1 UDP-glucose 4-epimerase GalE [Alicyclobacillus vulcanalis]", "diamond", "3912", "179", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Alicyclobacillaceae", "Alicyclobacillus", "Alicyclobacillus vulcanalis"], [32918242, "PRJNA492363_S_NODE_91753_length_206_cov_0.882759_g90932_i0", "PRJNA492363", "91753", "206", "0.882759", "1.81848354", "Clostridium sp.", "1506", "Bacteria", "Bacteria", "108", "6.74e-26", "", "NR", "WP_291700353.1", "1506", "g90932", "i0", "82.4", "0.990291262135922", "68", "12", "99", "0", "206", "3", "383", "450", "WP_291700353.1 phage tail tape measure protein [Clostridium sp.]", "diamond", "204", "108", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Clostridiaceae", "Clostridium", "Clostridium sp."], [32941438, "PRJNA492363_S_NODE_97081_length_203_cov_0.901408_g96260_i0", "PRJNA492363", "97081", "203", "0.901408", "1.82985824", "Negativicutes", "909932", "Bacteria", "Bacteria", "70.5", "2.38e-12", "", "NR", "WP_038675168.1", "484770", "g96260", "i0", "70.5", "3.94581280788177", "44", "13", "65", "0", "67", "198", "1", "44", "WP_038675168.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH [Pelosinus sp. UFO1]", "diamond", "801", "71.2", "0.990168539325843", "Bacteria", null, "Bacillati", "Bacillota", "Negativicutes", "Selenomonadales", "Sporomusaceae", "Pelosinus", "Pelosinus sp. UFO1"], [32941440, "PRJNA492363_S_NODE_98825_length_202_cov_1.361702_g98004_i0", "PRJNA492363", "98825", "202", "1.361702", "2.75063804", "Paenibacillus", "44249", "Bacteria", "Bacteria", "111", "1.27e-27", "", "NR", "WP_145408319.1", "528191", "g98004", "i0", "78.8", "2.92574257425743", "66", "14", "98", "0", "200", "3", "43", "108", "WP_145408319.1 ABC transporter substrate-binding protein [Paenibacillus xylanexedens]", "diamond", "591", "111", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Paenibacillaceae", "Paenibacillus", "Paenibacillus xylanexedens"], [32952516, "PRJNA492363_S_NODE_39346_length_237_cov_1.693182_g38525_i0", "PRJNA492363", "39346", "237", "1.693182", "4.01284134", "Massilibacillus massiliensis", "1806837", "Bacteria", "Bacteria", "89", "3.44e-19", "", "NR", "WP_110954057.1", "1806837", "g38525", "i0", "52.6", "0.987341772151899", "78", "36", "98.7", "1", "237", "4", "41", "117", "WP_110954057.1 glycosyltransferase family 2 protein [Massilibacillus massiliensis]", "diamond", "234", "89", "1", "Bacteria", null, "Bacillati", "Bacillota", "Negativicutes", "Veillonellales", "Veillonellaceae", "Massilibacillus", "Massilibacillus massiliensis"], [32952643, "PRJNA492363_S_NODE_92954_length_205_cov_2.979167_g92133_i0", "PRJNA492363", "92954", "205", "2.979167", "6.10729235", "Clostridiales bacterium CHKCI", "1898207", "Bacteria", "Bacteria", "113", "5.9899999999999995e-30", "", "NR", "CVI72592.1", "1780378", "g92133", "i0", "91.5", "0.863414634146341", "59", "5", "86.3", "0", "205", "29", "113", "171", "CVI72592.1 ECF RNA polymerase sigma factor SigW [Clostridiales bacterium CHKCI001]", "diamond", "177", "113", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", null, null, "Clostridiales bacterium CHKCI001"], [32975709, "PRJNA492363_S_NODE_89882_length_207_cov_0.876712_g89061_i0", "PRJNA492363", "89882", "207", "0.876712", "1.81479384", "Eubacterium", "1730", "Bacteria", "Bacteria", "95.5", "1.1699999999999997e-23", "", "NR", "WP_412191165.1", "142586", "g89061", "i0", "100", "1.39130434782609", "48", "0", "69.6", "0", "146", "3", "1", "48", "WP_412191165.1 Mur ligase domain-containing protein, partial [Eubacterium sp.]", "diamond", "288", "95.5", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Eubacteriaceae", "Eubacterium", "Eubacterium sp."], [32992673, "PRJNA492363_S_NODE_61419_length_228_cov_1.401198_g60598_i0", "PRJNA492363", "61419", "228", "1.401198", "3.19473144", "Staphylococcus", "1279", "Bacteria", "Bacteria", "75.9", "6.07e-14", "", "NR", "WP_369078522.1", "29382", "g60598", "i0", "54.4", "3", "57", "26", "75", "0", "206", "36", "1", "57", "WP_369078522.1 DNA repair protein RadA [Staphylococcus cohnii]", "diamond", "684", "76.3", "0.99475753604194", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Staphylococcaceae", "Staphylococcus", "Staphylococcus cohnii"], [33003747, "PRJNA492363_S_NODE_98963_length_202_cov_0.907801_g98142_i0", "PRJNA492363", "98963", "202", "0.907801", "1.83375802", "Jeotgalicoccus aerolatus", "709510", "Bacteria", "Bacteria", "143", "5.469999999999999e-38", "", "NR", "HJG32880.1", "709510", "g98142", "i0", "100", "0.995049504950495", "67", "0", "99.5", "0", "201", "1", "536", "602", "HJG32880.1 glycosyltransferase family 4 protein [Jeotgalicoccus aerolatus]", "diamond", "201", "143", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Staphylococcaceae", "Jeotgalicoccus", "Jeotgalicoccus aerolatus"], [33026836, "PRJNA492363_S_NODE_86244_length_209_cov_0.864865_g85423_i0", "PRJNA492363", "86244", "209", "0.864865", "1.80756785", "Streptococcus", "1301", "Bacteria", "Bacteria", "142", "2.1e-37", "", "NR", "RKV91865.1", "1306", "g85423", "i0", "98.6", "6.93301435406699", "69", "1", "99", "0", "209", "3", "415", "483", "RKV91865.1 MAG: YSIRK-type signal peptide-containing protein, partial [Streptococcus sp.]", "diamond", "1449", "142", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Streptococcaceae", "Streptococcus", "Streptococcus sp."], [33054656, "PRJNA492363_S_NODE_101085_length_201_cov_0.914286_g100264_i0", "PRJNA492363", "101085", "201", "0.914286", "1.83771486", "Bacillota bacterium", "1879010", "Bacteria", "Bacteria", "70.5", "3.33e-12", "", "NR", "MCL5040764.1", "1879010", "g100264", "i0", "50.8", "0.970149253731343", "65", "32", "97", "0", "197", "3", "326", "390", "MCL5040764.1 hypothetical protein [Bacillota bacterium]", "diamond", "195", "70.5", "1", "Bacteria", null, "Bacillati", "Bacillota", null, null, null, null, "Bacillota bacterium"], [33054868, "PRJNA492363_S_NODE_86269_length_209_cov_0.864865_g85448_i0", "PRJNA492363", "86269", "209", "0.864865", "1.80756785", "Halobacillus naozhouensis", "554880", "Bacteria", "Bacteria", "67.8", "8.77e-12", "", "NR", "WP_283078271.1", "554880", "g85448", "i0", "48.5", "3.78947368421053", "66", "34", "94.7", "0", "208", "11", "129", "194", "WP_283078271.1 LysE family translocator [Halobacillus naozhouensis]", "diamond", "792", "67.8", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Halobacillus", "Halobacillus naozhouensis"], [33060771, "PRJNA492363_S_NODE_4693_length_411_cov_2.577143_g3872_i0", "PRJNA492363", "4693", "411", "2.577143", "10.59205773", "root", "1", "Root_unresolved", "Root_unresolved", "58.9", "1.82e-8", "", "NR", "MDI9447315.1", "1879010", "g3872", "i0", "60.5", "1", "43", "17", "31.4", "0", "131", "3", "4", "46", "MDI9447315.1 hypothetical protein [Bacillota bacterium]", "diamond", "411", "58.9", "1", "Bacteria", null, "Bacillati", "Bacillota", null, null, null, null, "Bacillota bacterium"], [33071893, "PRJNA492363_S_NODE_95229_length_204_cov_0.895105_g94408_i0", "PRJNA492363", "95229", "204", "0.895105", "1.8260142", "[Clostridium] innocuum", "1522", "Bacteria", "Bacteria", "130", "1.26e-37", "", "NR", "WP_044909036.1", "1522", "g94408", "i0", "90.9", "0.970588235294118", "66", "6", "97.1", "0", "7", "204", "29", "94", "WP_044909036.1 integrase catalytic domain-containing protein, partial [[Clostridium] innocuum]", "diamond", "198", "130", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Clostridiaceae", "Clostridium", "[Clostridium] innocuum"], [33088837, "PRJNA492363_S_NODE_101006_length_201_cov_0.914286_g100185_i0", "PRJNA492363", "101006", "201", "0.914286", "1.83771486", "Macrococcus bovicus", "69968", "Bacteria", "Bacteria", "83.2", "7.65e-17", "", "NR", "WP_289649966.1", "69968", "g100185", "i0", "63.1", "0.970149253731343", "65", "24", "97", "0", "197", "3", "92", "156", "WP_289649966.1 cysteine desulfurase family protein [Macrococcus bovicus]", "diamond", "195", "83.2", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Staphylococcaceae", "Macrococcus", "Macrococcus bovicus"], [33146189, "PRJNA492363_S_NODE_86135_length_209_cov_0.864865_g85314_i0", "PRJNA492363", "86135", "209", "0.864865", "1.80756785", "Thermoanaerobacterium", "28895", "Bacteria", "Bacteria", "121", "3.88e-30", "", "NR", "WP_192401669.1", "1517", "g85314", "i0", "98.1", "1.52153110047847", "53", "1", "76.1", "0", "2", "160", "533", "585", "WP_192401669.1 transglycosylase domain-containing protein [Thermoanaerobacterium thermosaccharolyticum]", "diamond", "318", "121", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Thermoanaerobacterales", "Thermoanaerobacteraceae", "Thermoanaerobacterium", "Thermoanaerobacterium thermosaccharolyticum"], [33146202, "PRJNA492363_S_NODE_95215_length_204_cov_0.895105_g94394_i0", "PRJNA492363", "95215", "204", "0.895105", "1.8260142", "Bacillati", "1783272", "Bacteria", "Bacteria", "55.5", "4.15e-7", "", "NR", "WP_255309913.1", "86661", "g94394", "i0", "44.6", "3.91176470588235", "65", "28", "94.1", "2", "11", "202", "22", "79", "WP_255309913.1 MULTISPECIES: tyrosinase family protein [Bacillus cereus group]", "diamond", "798", "55.5", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Bacillus", null], [33156920, "PRJNA492363_S_NODE_100952_length_201_cov_0.914286_g100131_i0", "PRJNA492363", "100952", "201", "0.914286", "1.83771486", "Macrococcoides caseolyticum JCSC54", "69966", "Bacteria", "Bacteria", "43.9", "0.00375", "", "NR", "BAH18107.1", "458233", "g100131", "i0", "43.1", "1.35820895522388", "51", "25", "76.1", "1", "171", "19", "12", "58", "BAH18107.1 hypothetical protein MCCL_1400 [Macrococcoides caseolyticum JCSC5402]", "diamond", "273", "43.9", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Staphylococcaceae", "Macrococcoides", "Macrococcoides caseolyticum"]], "truncated": false, "filtered_table_rows_count": 18, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA492363", "p2": "Bacillota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492363&tax_phylum=Bacillota", "results": [{"value": "PRJNA492363", "label": "PRJNA492363", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Bacillota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492363&tax_phylum=Bacillota", "results": [{"value": "diamond", "label": "diamond", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA492363&tax_phylum=Bacillota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492363&tax_phylum=Bacillota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492363&tax_phylum=Bacillota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492363&tax_phylum=Bacillota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492363&tax_phylum=Bacillota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492363&tax_phylum=Bacillota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492363&tax_phylum=Bacillota", "results": [{"value": "Bacillota", "label": "Bacillota", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA492363", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 412.98027200002707}