{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA482207\" and tax_phylum = \"Campylobacterota\"", "rows": [[27076267, "PRJNA482207_P_NODE_16342_length_273_cov_1.815000_g16232_i0", "PRJNA482207", "16342", "273", "1.815", "4.95495", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "145", "1.7499999999999996e-43", "", "NR", "GAA8683247.1", "210", "g16232", "i0", "97.6", "0.912087912087912", "83", "2", "91.2", "0", "3", "251", "3", "85", "GAA8683247.1 hypothetical protein Kyoto145A_0510 [Helicobacter pylori]", "diamond", "249", "145", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [27123672, "PRJNA482207_P_NODE_9482_length_335_cov_2.087786_g9372_i0", "PRJNA482207", "9482", "335", "2.087786", "6.9940831", "root", "1", "Root_unresolved", "Root_unresolved", "105", "7.480000000000001e-27", "", "NR", "WP_238408432.1", "210", "g9372", "i0", "75.3", "5.22985074626866", "73", "18", "65.4", "0", "305", "87", "30", "102", "WP_238408432.1 DUF1398 family protein, partial [Helicobacter pylori]", "diamond", "1752", "105", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [30123787, "PRJNA482207_P_NODE_25212_length_246_cov_0.890173_g25102_i0", "PRJNA482207", "25212", "246", "0.890173", "2.18982558", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "50.8", "1.04e-5", "", "NR", "HFU74927.1", "1872629", "g25102", "i0", "88", "0.902439024390244", "25", "3", "30.5", "0", "4", "78", "97", "121", "HFU74927.1 VOC family protein [Arcobacter sp.]", "diamond", "222", "51.2", "0.9921875", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", "Arcobacter", "Arcobacter sp."], [32527174, "PRJNA482207_P_NODE_20539_length_250_cov_0.870056_g20429_i0", "PRJNA482207", "20539", "250", "0.870056", "2.17514", "Arcobacteraceae", "2808963", "Bacteria", "Bacteria", "129", "8.01e-36", "", "NR", "MCP4971261.1", "1872629", "g20429", "i0", "70.4", "3.96", "81", "24", "97.2", "0", "250", "8", "72", "152", "MCP4971261.1 hypothetical protein [Arcobacter sp.]", "diamond", "990", "129", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Arcobacteraceae", "Arcobacter", "Arcobacter sp."]], "truncated": false, "filtered_table_rows_count": 4, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA482207", "p2": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA482207&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA482207", "label": "PRJNA482207", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA482207&tax_phylum=Campylobacterota", "results": [{"value": "diamond", "label": "diamond", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA482207&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA482207&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA482207&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA482207&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA482207&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA482207&tax_phylum=Campylobacterota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA482207&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA482207", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 216.74584699212573}