{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA473824\" and tax_phylum = \"Thermodesulfobacteriota\"", "rows": [[5550548, "PRJNA473824_P_NODE_37905_length_196_cov_4.823899_g37267_i0", "PRJNA473824", "37905", "196", "4.823899", "9.45484204", "Bacteria", "2", "Bacteria", "Bacteria", "104", "4.079999999999999e-24", "", "NR", "WP_295544573.1", "1912772", "g37267", "i0", "72.3", "14.9387755102041", "65", "13", "99.5", "1", "2", "196", "117", "176", "WP_295544573.1 type IV secretory system conjugative DNA transfer family protein [Halodesulfovibrio sp.]", "diamond", "2928", "104", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Halodesulfovibrio", "Halodesulfovibrio sp."], [11925146, "PRJNA473824_P_NODE_160390_length_151_cov_2.789474_g159752_i0", "PRJNA473824", "160390", "151", "2.789474", "4.21210574", "Desulfobacteraceae bacterium", "2049433", "Bacteria", "Bacteria", "97.1", "2.19e-22", "", "NR", "RPH50413.1", "2049433", "g159752", "i0", "78.6", "6.67549668874172", "56", "6", "99.3", "1", "1", "150", "72", "127", "RPH50413.1 MAG: GDP-L-fucose synthase [Desulfobacteraceae bacterium]", "diamond", "1008", "97.1", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfobacteria", "Desulfobacterales", "Desulfobacteraceae", null, "Desulfobacteraceae bacterium"], [24048414, "PRJNA473824_P_NODE_42159_length_188_cov_2.072848_g41521_i0", "PRJNA473824", "42159", "188", "2.072848", "3.89695424", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "113", "2.7600000000000004e-27", "", "NR", "WP_374290838.1", "876", "g41521", "i0", "88.7", "3.95744680851064", "62", "7", "98.9", "0", "188", "3", "355", "416", "WP_374290838.1 ATP-binding protein [Desulfovibrio desulfuricans]", "diamond", "744", "113", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Desulfovibrio", "Desulfovibrio desulfuricans"], [27708482, "PRJNA473824_P_NODE_27384_length_227_cov_1.536842_g26746_i0", "PRJNA473824", "27384", "227", "1.536842", "3.48863134", "Candidatus Dadabacteria bacterium", "2080303", "Bacteria", "Bacteria", "72.4", "8.24e-15", "", "NR", "MCH8014820.1", "2080303", "g26746", "i0", "57.6", "3.11894273127753", "59", "24", "76.7", "1", "1", "174", "12", "70", "MCH8014820.1 tetratricopeptide repeat protein [Candidatus Dadabacteria bacterium]", "diamond", "708", "72.4", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Candidatus Dadabacteria", null, null, null, "Candidatus Dadabacteria bacterium"], [29475918, "PRJNA473824_P_NODE_66030_length_173_cov_4.213235_g65392_i0", "PRJNA473824", "66030", "173", "4.213235", "7.28889655", "Syntrophobacter fumaroxidans", "119484", "Bacteria", "Bacteria", "43.9", "0.00576", "", "NR", "WP_011698309.1", "119484", "g65392", "i0", "62.5", "0.416184971098266", "24", "9", "41.6", "0", "74", "3", "348", "371", "WP_011698309.1 PAS domain S-box protein [Syntrophobacter fumaroxidans]", "diamond", "72", "43.9", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Syntrophobacteria", "Syntrophobacterales", "Syntrophobacteraceae", "Syntrophobacter", "Syntrophobacter fumaroxidans"], [29649753, "PRJNA473824_P_NODE_45630_length_181_cov_14.305556_g44992_i0", "PRJNA473824", "45630", "181", "14.305556", "25.89305636", "Bacteria", "2", "Bacteria", "Bacteria", "85.1", "3.42e-19", "", "NR", "MDQ1269207.1", "2202153", "g44992", "i0", "71.2", "7.70718232044199", "59", "17", "97.8", "0", "179", "3", "78", "136", "MDQ1269207.1 rare lipoprotein [Thermodesulfobacteriota bacterium]", "diamond", "1395", "85.9", "0.990686845168801", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", null, null, null, null, "Thermodesulfobacteriota bacterium"], [30613221, "PRJNA473824_P_NODE_143553_length_151_cov_4.649123_g142915_i0", "PRJNA473824", "143553", "151", "4.649123", "7.02017573", "Desulfuromonadales bacterium", "2099678", "Bacteria", "Bacteria", "43.1", "0.00705", "", "NR", "MBK5275779.1", "2099678", "g142915", "i0", "43.5", "0.913907284768212", "46", "26", "91.4", "0", "143", "6", "14", "59", "MBK5275779.1 hypothetical protein [Desulfuromonadales bacterium]", "diamond", "138", "43.1", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfuromonadia", "Desulfuromonadales", null, null, "Desulfuromonadales bacterium"], [30676399, "PRJNA473824_P_NODE_32813_length_209_cov_3.151163_g32175_i0", "PRJNA473824", "32813", "209", "3.151163", "6.58593067", "uncultured Desulfovibrio sp.", "167968", "Bacteria", "Bacteria", "44.7", "0.00498", "", "NR", "WP_296303755.1", "167968", "g32175", "i0", "60", "0.502392344497608", "35", "14", "50.2", "0", "106", "2", "196", "230", "WP_296303755.1 PcfJ domain-containing protein [uncultured Desulfovibrio sp.]", "diamond", "105", "44.7", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Desulfovibrio", "uncultured Desulfovibrio sp."], [32020650, "PRJNA473824_P_NODE_16558_length_292_cov_1.329412_g15920_i0", "PRJNA473824", "16558", "292", "1.329412", "3.88188304", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "49.3", "3.38e-4", "", "NR", "MBI5250990.1", "2358", "g15920", "i0", "52.4", "1.36643835616438", "42", "20", "43.2", "0", "157", "32", "360", "401", "MBI5250990.1 DUF1311 domain-containing protein [Desulfomonile tiedjei]", "diamond", "399", "49.7", "0.991951710261569", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfomonilia", "Desulfomonilales", "Desulfomonilaceae", "Desulfomonile", "Desulfomonile tiedjei"], [32036070, "PRJNA473824_P_NODE_15918_length_298_cov_5.915709_g15280_i0", "PRJNA473824", "15918", "298", "5.915709", "17.62881282", "Halodesulfovibrio spirochaetisodalis", "1560234", "Bacteria", "Bacteria", "95.1", "2.88e-20", "", "NR", "WP_066856630.1", "1560234", "g15280", "i0", "67.2", "0.614093959731544", "61", "20", "61.4", "0", "115", "297", "1", "61", "WP_066856630.1 DNA topoisomerase III [Halodesulfovibrio spirochaetisodalis]", "diamond", "183", "95.1", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Desulfovibrionia", "Desulfovibrionales", "Desulfovibrionaceae", "Halodesulfovibrio", "Halodesulfovibrio spirochaetisodalis"], [32888686, "PRJNA473824_P_NODE_34640_length_204_cov_3.970060_g34002_i0", "PRJNA473824", "34640", "204", "3.97006", "8.0989224", "Syntrophales bacterium", "2928017", "Bacteria", "Bacteria", "117", "1.19e-28", "", "NR", "HVO67705.1", "2928017", "g34002", "i0", "76.1", "0.985294117647059", "67", "16", "98.5", "0", "4", "204", "770", "836", "HVO67705.1 PAS domain S-box protein [Syntrophales bacterium]", "diamond", "201", "117", "1", "Bacteria", null, "Pseudomonadati", "Thermodesulfobacteriota", "Syntrophia", "Syntrophales", null, null, "Syntrophales bacterium"]], "truncated": false, "filtered_table_rows_count": 11, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA473824", "p2": "Thermodesulfobacteriota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA473824&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "PRJNA473824", "label": "PRJNA473824", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Thermodesulfobacteriota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA473824&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "diamond", "label": "diamond", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA473824&tax_phylum=Thermodesulfobacteriota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA473824&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA473824&tax_phylum=Thermodesulfobacteriota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA473824&tax_phylum=Thermodesulfobacteriota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA473824&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA473824&tax_phylum=Thermodesulfobacteriota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA473824&tax_phylum=Thermodesulfobacteriota", "results": [{"value": "Thermodesulfobacteriota", "label": "Thermodesulfobacteriota", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA473824", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 436.8055940140039}