{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA438111\" and tax_clade = \"Stenosarchaea group\"", "rows": [[14463344, "PRJNA438111_P_NODE_76312_length_160_cov_6.282443_g75687_i0", "PRJNA438111", "76312", "160", "6.282443", "10.0519088", "Halopenitus sp.", "1979403", "Archaea", "Archaea", "100", "2.4899999999999998e-23", "", "NR", "MFB6236188.1", "1979403", "g75687", "i0", "98.1", "0.975", "52", "1", "97.5", "0", "158", "3", "122", "173", "MFB6236188.1 MATE family efflux transporter [Halopenitus sp.]", "diamond", "156", "100", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Haloferacaceae", "Halopenitus", "Halopenitus sp."], [18285499, "PRJNA438111_P_NODE_18715_length_246_cov_5.525346_g18090_i0", "PRJNA438111", "18715", "246", "5.525346", "13.59235116", "Methanothrix", "2222", "Archaea", "Archaea", "122", "8.58e-31", "", "NR", "HNX39946.1", "90426", "g18090", "i0", "71.3", "11.7682926829268", "80", "23", "97.6", "0", "243", "4", "236", "315", "HNX39946.1 ATP citrate lyase citrate-binding domain-containing protein [Methanothrix sp.]", "diamond", "2895", "123", "0.991869918699187", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanotrichales", "Methanotrichaceae", "Methanothrix", "Methanothrix sp."], [24660620, "PRJNA438111_P_NODE_54880_length_176_cov_4.734694_g54255_i0", "PRJNA438111", "54880", "176", "4.734694", "8.33306144", "Halobacteriales", "2235", "Archaea", "Archaea", "112", "6.06e-27", "", "NR", "WP_018258693.1", "437163", "g54255", "i0", "87.9", "7.90909090909091", "58", "7", "98.9", "0", "1", "174", "351", "408", "WP_018258693.1 PD-(D/E)XK nuclease family protein [Halomicrobium katesii]", "diamond", "1392", "112", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Haloarculaceae", "Halomicrobium", "Halomicrobium katesii"], [26822963, "PRJNA438111_P_NODE_87701_length_152_cov_3.227642_g87076_i0", "PRJNA438111", "87701", "152", "3.227642", "4.90601584", "Salinarchaeum sp. Harcht-Bsk1", "1333523", "Archaea", "Archaea", "47.4", "2.45e-4", "", "NR", "WP_020445251.1", "1333523", "g87076", "i0", "73.1", "0.513157894736842", "26", "7", "51.3", "0", "79", "2", "1", "26", "WP_020445251.1 hypothetical protein [Salinarchaeum sp. Harcht-Bsk1]", "diamond", "78", "47.4", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Natronoarchaeaceae", "Salinarchaeum", "Salinarchaeum sp. Harcht-Bsk1"], [27107365, "PRJNA438111_P_NODE_48202_length_183_cov_6.201299_g47577_i0", "PRJNA438111", "48202", "183", "6.201299", "11.34837717", "Natrialbaceae archaeon", "2093806", "Archaea", "Archaea", "45.4", "0.00184", "", "NR", "MDZ7730426.1", "2093806", "g47577", "i0", "43.1", "0.836065573770492", "51", "29", "83.6", "0", "9", "161", "280", "330", "MDZ7730426.1 carboxypeptidase-like regulatory domain-containing protein [Natrialbaceae archaeon]", "diamond", "153", "45.4", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Natrialbaceae", null, "Natrialbaceae archaeon"], [27138772, "PRJNA438111_P_NODE_59902_length_171_cov_4.528169_g59277_i0", "PRJNA438111", "59902", "171", "4.528169", "7.74316899", "Halopenitus sp.", "1979403", "Archaea", "Archaea", "52", "6.99e-6", "", "NR", "MFB6235460.1", "1979403", "g59277", "i0", "92.6", "0.473684210526316", "27", "2", "47.4", "0", "83", "3", "1", "27", "MFB6235460.1 transcription initiation factor IIB family protein [Halopenitus sp.]", "diamond", "81", "52", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Haloferacaceae", "Halopenitus", "Halopenitus sp."], [28134720, "PRJNA438111_P_NODE_55865_length_175_cov_4.582192_g55240_i0", "PRJNA438111", "55865", "175", "4.582192", "8.018836", "Candidatus Methanoperedens", "1392997", "Archaea", "Archaea", "83.2", "8.47e-17", "", "NR", "WP_096204006.1", "1392998", "g55240", "i0", "69", "1.98857142857143", "58", "18", "99.4", "0", "1", "174", "1413", "1470", "WP_096204006.1 neuraminidase-like domain-containing protein [Candidatus Methanoperedens nitroreducens]", "diamond", "348", "83.2", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanosarcinales", "Candidatus Methanoperedentaceae", "Candidatus Methanoperedens", "Candidatus Methanoperedens nitratireducens"], [28244371, "PRJNA438111_P_NODE_83406_length_155_cov_3.380952_g82781_i0", "PRJNA438111", "83406", "155", "3.380952", "5.2404756", "Natronomonas sp. LN261", "2750669", "Archaea", "Archaea", "57", "1.01e-7", "", "NR", "WP_181691083.1", "2750669", "g82781", "i0", "96.3", "0.52258064516129", "27", "1", "52.3", "0", "2", "82", "332", "358", "WP_181691083.1 DHH family phosphoesterase [Natronomonas sp. LN261]", "diamond", "81", "57", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Natronomonadaceae", "Natronomonas", "Natronomonas sp. LN261"], [28655039, "PRJNA438111_P_NODE_66227_length_167_cov_1.978261_g65602_i0", "PRJNA438111", "66227", "167", "1.978261", "3.30369587", "Halobacteriaceae archaeon GCM10025711", "3252693", "Archaea", "Archaea", "81.3", "6.92e-17", "", "NR", "MFC7045968.1", "3252693", "g65602", "i0", "60", "0.988023952095808", "55", "22", "98.8", "0", "3", "167", "113", "167", "MFC7045968.1 NAD-dependent protein deacylase [Halobacteriaceae archaeon GCM10025711]", "diamond", "165", "81.3", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Halobacteriaceae", null, "Halobacteriaceae archaeon GCM10025711"], [29160445, "PRJNA438111_P_NODE_81209_length_157_cov_2.164062_g80584_i0", "PRJNA438111", "81209", "157", "2.164062", "3.39757734", "Methanosarcina sp.", "2213", "Archaea", "Archaea", "95.9", "7.750000000000001e-22", "", "NR", "HET8687065.1", "2213", "g80584", "i0", "78.4", "0.974522292993631", "51", "11", "97.5", "0", "155", "3", "58", "108", "HET8687065.1 hypothetical protein [Methanosarcina sp.]", "diamond", "153", "95.9", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanosarcinales", "Methanosarcinaceae", "Methanosarcina", "Methanosarcina sp."], [29949612, "PRJNA438111_P_NODE_42411_length_191_cov_1.037037_g41786_i0", "PRJNA438111", "42411", "191", "1.037037", "1.98074067", "Natrinema gelatinilyticum", "2961571", "Archaea", "Archaea", "70.1", "8.6e-13", "", "NR", "WP_256566890.1", "2961571", "g41786", "i0", "45.9", "0.958115183246073", "61", "33", "95.8", "0", "185", "3", "140", "200", "WP_256566890.1 DUF6338 family protein [Natrinema gelatinilyticum]", "diamond", "183", "70.1", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Natrialbaceae", "Natrinema", "Natrinema gelatinilyticum"], [29965998, "PRJNA438111_P_NODE_4371_length_472_cov_5.203160_g3827_i0", "PRJNA438111", "4371", "472", "5.20316", "24.5589152", "Methanothrix", "2222", "Archaea", "Archaea", "108", "4.67e-24", "", "NR", "MCX6674432.1", "90426", "g3827", "i0", "42.9", "2.13559322033898", "168", "80", "98.5", "6", "6", "470", "344", "508", "MCX6674432.1 S8 family serine peptidase [Methanothrix sp.]", "diamond", "1008", "108", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanotrichales", "Methanotrichaceae", "Methanothrix", "Methanothrix sp."], [30233908, "PRJNA438111_P_NODE_35572_length_203_cov_3.844828_g34947_i0", "PRJNA438111", "35572", "203", "3.844828", "7.80500084", "Methanothrix sp.", "90426", "Archaea", "Archaea", "65.5", "2.1e-10", "", "NR", "MDH7597823.1", "90426", "g34947", "i0", "62.8", "0.635467980295567", "43", "16", "63.5", "0", "203", "75", "47", "89", "MDH7597823.1 SWIM zinc finger family protein [Methanothrix sp.]", "diamond", "129", "65.5", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanotrichales", "Methanotrichaceae", "Methanothrix", "Methanothrix sp."], [30960677, "PRJNA438111_P_NODE_11394_length_305_cov_1.615942_g10769_i0", "PRJNA438111", "11394", "305", "1.615942", "4.9286231", "Haloarchaeobius sp. FL176", "2967129", "Archaea", "Archaea", "62.8", "7.02e-9", "", "NR", "WP_257300978.1", "2967129", "g10769", "i0", "40.8", "1.97704918032787", "103", "56", "96.4", "2", "299", "6", "537", "639", "WP_257300978.1 AMP-dependent synthetase/ligase [Haloarchaeobius sp. FL176]", "diamond", "603", "62.8", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Halorubellaceae", "Haloarchaeobius", "Haloarchaeobius sp. FL176"], [31118362, "PRJNA438111_P_NODE_60015_length_171_cov_3.802817_g59390_i0", "PRJNA438111", "60015", "171", "3.802817", "6.50281707", "Halopenitus sp.", "1979403", "Archaea", "Archaea", "77.8", "5.89e-15", "", "NR", "MFB6234634.1", "1979403", "g59390", "i0", "97.5", "0.701754385964912", "40", "1", "70.2", "0", "52", "171", "1", "40", "MFB6234634.1 AI-2E family transporter [Halopenitus sp.]", "diamond", "120", "77.8", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Haloferacaceae", "Halopenitus", "Halopenitus sp."], [31181459, "PRJNA438111_P_NODE_19515_length_242_cov_4.234742_g18890_i0", "PRJNA438111", "19515", "242", "4.234742", "10.24807564", "Halovenus rubra", "869890", "Archaea", "Archaea", "155", "1.19e-41", "", "NR", "WP_267637264.1", "869890", "g18890", "i0", "98.8", "0.991735537190083", "80", "1", "99.2", "0", "2", "241", "594", "673", "WP_267637264.1 class I SAM-dependent DNA methyltransferase [Halovenus rubra]", "diamond", "240", "155", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Haloarculaceae", "Halovenus", "Halovenus rubra"], [31845896, "PRJNA438111_P_NODE_78957_length_158_cov_5.674419_g78332_i0", "PRJNA438111", "78957", "158", "5.674419", "8.96558202", "Halopenitus sp.", "1979403", "Archaea", "Archaea", "71.6", "4.32e-13", "", "NR", "MFB6235697.1", "1979403", "g78332", "i0", "96.8", "0.588607594936709", "31", "1", "58.9", "0", "3", "95", "267", "297", "MFB6235697.1 sulfite exporter TauE/SafE family protein [Halopenitus sp.]", "diamond", "93", "71.6", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Haloferacaceae", "Halopenitus", "Halopenitus sp."], [31877433, "PRJNA438111_P_NODE_37737_length_197_cov_5.428571_g37112_i0", "PRJNA438111", "37737", "197", "5.428571", "10.69428487", "Methanomicrobia archaeon", "2268195", "Archaea", "Archaea", "81.6", "3.42e-16", "", "NR", "HDS45311.1", "2268195", "g37112", "i0", "64.6", "0.989847715736041", "65", "23", "99", "0", "195", "1", "247", "311", "HDS45311.1 hypothetical protein [Methanomicrobia archaeon]", "diamond", "195", "81.6", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", null, null, null, "Methanomicrobia archaeon"], [31940684, "PRJNA438111_P_NODE_13717_length_281_cov_4.285714_g13092_i0", "PRJNA438111", "13717", "281", "4.285714", "12.04285634", "Candidatus Methanophagales archaeon", "2056316", "Archaea", "Archaea", "59.3", "1.44e-8", "", "NR", "MCR5853184.1", "2056316", "g13092", "i0", "68.6", "0.373665480427046", "35", "11", "37.4", "0", "271", "167", "7", "41", "MCR5853184.1 tetratricopeptide repeat protein [Candidatus Methanophagales archaeon]", "diamond", "105", "59.3", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Candidatus Methanophagales", null, null, "Candidatus Methanophagales archaeon"], [31940724, "PRJNA438111_P_NODE_59177_length_172_cov_2.902098_g58552_i0", "PRJNA438111", "59177", "172", "2.902098", "4.99160856", "Methanocellales archaeon", "2666334", "Archaea", "Archaea", "55.8", "2.74e-7", "", "NR", "MDI6903002.1", "2666334", "g58552", "i0", "54.5", "0.767441860465116", "44", "19", "76.7", "1", "1", "132", "8", "50", "MDI6903002.1 hypothetical protein [Methanocellales archaeon]", "diamond", "132", "55.8", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanocellales", null, null, "Methanocellales archaeon"], [32067328, "PRJNA438111_P_NODE_39138_length_195_cov_5.831325_g38513_i0", "PRJNA438111", "39138", "195", "5.831325", "11.37108375", "Candidatus Methanoperedens sp.", "2032688", "Archaea", "Archaea", "72.8", "4.64e-13", "", "NR", "MCX9075357.1", "2032688", "g38513", "i0", "60", "2.01538461538462", "65", "24", "96.9", "1", "193", "5", "27", "91", "MCX9075357.1 caspase family protein [Candidatus Methanoperedens sp.]", "diamond", "393", "72.8", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanosarcinales", "Candidatus Methanoperedentaceae", "Candidatus Methanoperedens", "Candidatus Methanoperedens sp."], [32289292, "PRJNA438111_P_NODE_10239_length_320_cov_1.694158_g9618_i0", "PRJNA438111", "10239", "320", "1.694158", "5.4213056", "Candidatus Methanophagales archaeon", "2056316", "Archaea", "Archaea", "61.2", "4.05e-9", "", "NR", "MCR5853184.1", "2056316", "g9618", "i0", "71.4", "0.328125", "35", "10", "32.8", "0", "26", "130", "7", "41", "MCR5853184.1 tetratricopeptide repeat protein [Candidatus Methanophagales archaeon]", "diamond", "105", "61.2", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Candidatus Methanophagales", null, null, "Candidatus Methanophagales archaeon"], [32762555, "PRJNA438111_P_NODE_49120_length_182_cov_5.281046_g48495_i0", "PRJNA438111", "49120", "182", "5.281046", "9.61150372", "Methanosarcinales archaeon", "2250255", "Archaea", "Archaea", "51.2", "5.93e-6", "", "NR", "RZN37674.1", "2250255", "g48495", "i0", "49.1", "1.68131868131868", "55", "28", "90.7", "0", "168", "4", "47", "101", "RZN37674.1 MAG: hypothetical protein EF813_05580 [Methanosarcinales archaeon]", "diamond", "306", "51.2", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanosarcinales", null, null, "Methanosarcinales archaeon"], [32793849, "PRJNA438111_P_NODE_74720_length_161_cov_4.946970_g74095_i0", "PRJNA438111", "74720", "161", "4.94697", "7.9646217", "Methanosarcina sp. MTP4", "1434100", "Archaea", "Archaea", "50.1", "3.16e-5", "", "NR", "WP_369799630.1", "1434100", "g74095", "i0", "53.7", "0.763975155279503", "41", "19", "76.4", "0", "6", "128", "12", "52", "WP_369799630.1 tetratricopeptide repeat protein [Methanosarcina sp. MTP4]", "diamond", "123", "50.1", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanosarcinales", "Methanosarcinaceae", "Methanosarcina", "Methanosarcina sp. MTP4"]], "truncated": false, "filtered_table_rows_count": 24, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA438111", "p2": "Stenosarchaea group"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA438111&tax_clade=Stenosarchaea+group", "results": [{"value": "PRJNA438111", "label": "PRJNA438111", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_clade=Stenosarchaea+group", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA438111&tax_clade=Stenosarchaea+group", "results": [{"value": "diamond", "label": "diamond", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA438111&tax_clade=Stenosarchaea+group", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA438111&tax_clade=Stenosarchaea+group", "results": [{"value": "Archaea", "label": "Archaea", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA438111&tax_clade=Stenosarchaea+group&tax_superkingdom=Archaea", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA438111&tax_clade=Stenosarchaea+group", "results": [{"value": "Stenosarchaea group", "label": "Stenosarchaea group", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA438111", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA438111&tax_clade=Stenosarchaea+group", "results": [{"value": "Methanobacteriati", "label": "Methanobacteriati", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA438111&tax_clade=Stenosarchaea+group&tax_kingdom=Methanobacteriati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA438111&tax_clade=Stenosarchaea+group", "results": [{"value": "Methanobacteriota", "label": "Methanobacteriota", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA438111&tax_clade=Stenosarchaea+group&tax_phylum=Methanobacteriota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 209.901419992093}