{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA432257\" and tax_phylum = \"Chlamydiota\"", "rows": [[5532727, "PRJNA432257_S_NODE_108625_length_168_cov_1.488550_g108244_i0", "PRJNA432257", "108625", "168", "1.48855", "2.500764", "Parachlamydiaceae bacterium", "2052176", "Bacteria", "Bacteria", "80.9", "4.31e-16", "", "NR", "MDP1880919.1", "2052176", "g108244", "i0", "82.7", "2.78571428571429", "52", "9", "92.9", "0", "12", "167", "125", "176", "MDP1880919.1 DEAD/DEAH box helicase [Parachlamydiaceae bacterium]", "diamond", "468", "80.9", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "Parachlamydiaceae bacterium"], [14458302, "PRJNA432257_S_NODE_27912_length_286_cov_12.955823_g27531_i0", "PRJNA432257", "27912", "286", "12.955823", "37.05365378", "Neochlamydia sp. EPS4", "1478175", "Bacteria", "Bacteria", "82", "9.09e-16", "", "NR", "WP_044882341.1", "1478175", "g27531", "i0", "80.9", "3.44055944055944", "47", "9", "49.3", "0", "173", "33", "1", "47", "WP_044882341.1 CTP synthase [Neochlamydia sp. EPS4]", "diamond", "984", "82", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Neochlamydia", "Neochlamydia sp. EPS4"], [26791080, "PRJNA432257_S_NODE_62101_length_213_cov_3.284091_g61720_i0", "PRJNA432257", "62101", "213", "3.284091", "6.99511383", "Candidatus Protochlamydia amoebophila", "362787", "Bacteria", "Bacteria", "89", "1.38e-18", "", "NR", "WP_039356713.1", "362787", "g61720", "i0", "66.1", "0.873239436619718", "62", "21", "87.3", "0", "213", "28", "1099", "1160", "WP_039356713.1 DNA polymerase III subunit alpha [Candidatus Protochlamydia amoebophila]", "diamond", "186", "89", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", "Candidatus Protochlamydia", "Candidatus Protochlamydia amoebophila"], [27802497, "PRJNA432257_S_NODE_96584_length_179_cov_1.922535_g96203_i0", "PRJNA432257", "96584", "179", "1.922535", "3.44133765", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "57.8", "7.62e-8", "", "NR", "HEX2582527.1", "2047757", "g96203", "i0", "74.3", "0.58659217877095", "35", "9", "58.7", "0", "106", "2", "264", "298", "HEX2582527.1 transposase [Chlamydiales bacterium]", "diamond", "105", "57.8", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [28117967, "PRJNA432257_S_NODE_35765_length_262_cov_2.635556_g35384_i0", "PRJNA432257", "35765", "262", "2.635556", "6.90515672", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "112", "2.86e-30", "", "NR", "MBM3198043.1", "2081524", "g35384", "i0", "85.7", "0.801526717557252", "70", "10", "80.2", "0", "1", "210", "16", "85", "MBM3198043.1 hypothetical protein [Chlamydiota bacterium]", "diamond", "210", "112", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"], [28149771, "PRJNA432257_S_NODE_81725_length_191_cov_14.110390_g81344_i0", "PRJNA432257", "81725", "191", "14.11039", "26.9508449", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "50.4", "3.5e-5", "", "NR", "MBM3198452.1", "2081524", "g81344", "i0", "55.8", "0.675392670157068", "43", "19", "67.5", "0", "25", "153", "137", "179", "MBM3198452.1 tyrosine transporter [Chlamydiota bacterium]", "diamond", "129", "50.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"], [28212539, "PRJNA432257_S_NODE_25226_length_297_cov_3.196154_g24845_i0", "PRJNA432257", "25226", "297", "3.196154", "9.49257738", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "114", "2.68e-30", "", "NR", "MES2199474.1", "2081524", "g24845", "i0", "72.7", "0.777777777777778", "77", "21", "77.8", "0", "238", "8", "1", "77", "MES2199474.1 flagellar biosynthetic protein FliO [Chlamydiota bacterium]", "diamond", "231", "114", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"], [28212543, "PRJNA432257_S_NODE_41086_length_248_cov_237.042654_g40705_i0", "PRJNA432257", "41086", "248", "237.042654", "587.86578192", "Parachlamydiales bacterium", "2052178", "Bacteria", "Bacteria", "94.4", "2.77e-20", "", "NR", "MBX7065997.1", "2052178", "g40705", "i0", "63", "0.883064516129032", "73", "27", "88.3", "0", "4", "222", "126", "198", "MBX7065997.1 hypothetical protein [Parachlamydiales bacterium]", "diamond", "219", "94.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", null, null, "Parachlamydiales bacterium"], [28734489, "PRJNA432257_S_NODE_106647_length_170_cov_1.804511_g106266_i0", "PRJNA432257", "106647", "170", "1.804511", "3.0676687", "Candidatus Rhabdochlamydia", "292833", "Bacteria", "Bacteria", "89", "5.06e-20", "", "NR", "NDD58211.1", "2081524", "g106266", "i0", "91.7", "1.69411764705882", "48", "4", "84.7", "0", "26", "169", "168", "215", "NDD58211.1 DUF1016 family protein [Chlamydiota bacterium]", "diamond", "288", "89.7", "0.992196209587514", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"], [28780964, "PRJNA432257_S_NODE_14667_length_357_cov_166.928125_g14286_i0", "PRJNA432257", "14667", "357", "166.928125", "595.93340625", "Chlamydiae bacterium RIFCSPHIGHO2_", "2081524", "Bacteria", "Bacteria", "169", "5.93e-50", "", "NR", "OGN55661.1", "1797598", "g14286", "i0", "81.6", "0.865546218487395", "103", "19", "86.6", "0", "14", "322", "33", "135", "OGN55661.1 MAG: hypothetical protein A2796_00600 [Chlamydiae bacterium RIFCSPHIGHO2_01_FULL_44_39]", "diamond", "309", "169", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiae bacterium RIFCSPHIGHO2_01_FULL_44_39"], [28780973, "PRJNA432257_S_NODE_24707_length_299_cov_14.133588_g24326_i0", "PRJNA432257", "24707", "299", "14.133588", "42.25942812", "Candidatus Rhabdochlamydia porcellionis", "225148", "Bacteria", "Bacteria", "88.6", "6.01e-19", "", "NR", "WP_194845305.1", "225148", "g24326", "i0", "48.3", "0.872909698996655", "87", "45", "87.3", "0", "297", "37", "29", "115", "WP_194845305.1 hypothetical protein [Candidatus Rhabdochlamydia porcellionis]", "diamond", "261", "88.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Candidatus Rhabdochlamydiaceae", "Candidatus Rhabdochlamydia", "Candidatus Rhabdochlamydia porcellionis"], [28812394, "PRJNA432257_S_NODE_57528_length_219_cov_10.439560_g57147_i0", "PRJNA432257", "57528", "219", "10.43956", "22.8626364", "Chlamydiales bacterium", "2047757", "Bacteria", "Bacteria", "45.1", "0.00403", "", "NR", "MDF2577895.1", "2047757", "g57147", "i0", "57.1", "0.479452054794521", "35", "15", "47.9", "0", "39", "143", "365", "399", "MDF2577895.1 dadA [Chlamydiales bacterium]", "diamond", "105", "45.1", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Chlamydiales", null, null, "Chlamydiales bacterium"], [29096984, "PRJNA432257_S_NODE_64288_length_210_cov_12.219653_g63907_i0", "PRJNA432257", "64288", "210", "12.219653", "25.6612713", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "117", "1.21e-28", "", "NR", "MES2200410.1", "2081524", "g63907", "i0", "98.2", "1.57142857142857", "55", "1", "78.6", "0", "34", "198", "81", "135", "MES2200410.1 UvrD-helicase domain-containing protein [Chlamydiota bacterium]", "diamond", "330", "117", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"], [29822816, "PRJNA432257_S_NODE_105911_length_171_cov_1.455224_g105530_i0", "PRJNA432257", "105911", "171", "1.455224", "2.48843304", "Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9", "1797605", "Bacteria", "Bacteria", "63.9", "2.36e-11", "", "NR", "OGN63667.1", "1797605", "g105530", "i0", "60.7", "1.07017543859649", "61", "19", "98.2", "1", "2", "169", "11", "71", "OGN63667.1 MAG: hypothetical protein A3E80_02750 [Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9]", "diamond", "183", "63.9", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9"], [30107273, "PRJNA432257_S_NODE_102392_length_174_cov_3.145985_g102011_i0", "PRJNA432257", "102392", "174", "3.145985", "5.4740139", "Rhabdochlamydiaceae bacterium", "2047756", "Bacteria", "Bacteria", "51.2", "1.29e-5", "", "NR", "MBX9924004.1", "2047756", "g102011", "i0", "63.2", "0.655172413793103", "38", "14", "65.5", "0", "173", "60", "227", "264", "MBX9924004.1 hypothetical protein [Rhabdochlamydiaceae bacterium]", "diamond", "114", "51.2", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Candidatus Rhabdochlamydiaceae", null, "Rhabdochlamydiaceae bacterium"], [30329081, "PRJNA432257_S_NODE_13492_length_368_cov_27.743202_g13111_i0", "PRJNA432257", "13492", "368", "27.743202", "102.09498336", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "124", "4.559999999999999e-31", "", "NR", "MES2199605.1", "2081524", "g13111", "i0", "59.3", "0.880434782608696", "108", "44", "88", "0", "331", "8", "163", "270", "MES2199605.1 SET domain-containing protein [Chlamydiota bacterium]", "diamond", "324", "124", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"], [31624396, "PRJNA432257_S_NODE_91016_length_183_cov_13.047945_g90635_i0", "PRJNA432257", "91016", "183", "13.047945", "23.87773935", "Chlamydiia bacterium", "2052156", "Bacteria", "Bacteria", "52.8", "4.12e-6", "", "NR", "MCB1110761.1", "2052156", "g90635", "i0", "57.9", "0.622950819672131", "38", "16", "62.3", "0", "3", "116", "49", "86", "MCB1110761.1 hypothetical protein [Chlamydiia bacterium]", "diamond", "114", "52.8", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", null, null, null, "Chlamydiia bacterium"], [32162386, "PRJNA432257_S_NODE_36738_length_259_cov_10.468468_g36357_i0", "PRJNA432257", "36738", "259", "10.468468", "27.11333212", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "90.5", "4.91e-21", "", "NR", "MBM3198114.1", "2081524", "g36357", "i0", "70.6", "0.787644787644788", "68", "20", "78.8", "0", "255", "52", "34", "101", "MBM3198114.1 hypothetical protein [Chlamydiota bacterium]", "diamond", "204", "90.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"], [32447201, "PRJNA432257_S_NODE_119479_length_157_cov_1.900000_g119098_i0", "PRJNA432257", "119479", "157", "1.9", "2.983", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "57.4", "5.29e-8", "", "NR", "MBM3198663.1", "2081524", "g119098", "i0", "60", "0.859872611464968", "45", "18", "86", "0", "146", "12", "28", "72", "MBM3198663.1 hypothetical protein [Chlamydiota bacterium]", "diamond", "135", "57.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"], [32447221, "PRJNA432257_S_NODE_2959_length_636_cov_26.008347_g2774_i0", "PRJNA432257", "2959", "636", "26.008347", "165.41308692", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "190", "6.259999999999999e-55", "", "NR", "MES2200534.1", "2081524", "g2774", "i0", "66.7", "0.650943396226415", "138", "44", "65.1", "1", "188", "601", "1", "136", "MES2200534.1 alkaline phosphatase family protein [Chlamydiota bacterium]", "diamond", "414", "190", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"], [32478858, "PRJNA432257_S_NODE_125779_length_152_cov_1.356522_g125398_i0", "PRJNA432257", "125779", "152", "1.356522", "2.06191344", "Parachlamydiaceae bacterium", "2052176", "Bacteria", "Bacteria", "73.6", "1.39e-13", "", "NR", "MBA3816841.1", "2052176", "g125398", "i0", "70", "0.986842105263158", "50", "15", "98.7", "0", "152", "3", "121", "170", "MBA3816841.1 hypothetical protein [Parachlamydiaceae bacterium]", "diamond", "150", "73.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", "Parachlamydiales", "Parachlamydiaceae", null, "Parachlamydiaceae bacterium"], [32542173, "PRJNA432257_S_NODE_45999_length_238_cov_29.512438_g45618_i0", "PRJNA432257", "45999", "238", "29.512438", "70.23960244", "Chlamydiia bacterium", "2052156", "Bacteria", "Bacteria", "73.6", "2.68e-13", "", "NR", "MCH9630692.1", "2052156", "g45618", "i0", "67.3", "0.69327731092437", "55", "17", "68.1", "1", "183", "22", "20", "74", "MCH9630692.1 Oligopeptide transport system permease protein OppC [Chlamydiia bacterium]", "diamond", "165", "73.6", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", "Chlamydiia", null, null, null, "Chlamydiia bacterium"], [32731043, "PRJNA432257_S_NODE_13900_length_364_cov_77.446483_g13519_i0", "PRJNA432257", "13900", "364", "77.446483", "281.90519812", "Chlamydiota bacterium", "2081524", "Bacteria", "Bacteria", "138", "4.56e-37", "", "NR", "MES2199559.1", "2081524", "g13519", "i0", "85.5", "0.626373626373626", "76", "11", "62.6", "0", "98", "325", "8", "83", "MES2199559.1 alpha/beta fold hydrolase [Chlamydiota bacterium]", "diamond", "228", "138", "1", "Bacteria", "PVC group", "Pseudomonadati", "Chlamydiota", null, null, null, null, "Chlamydiota bacterium"]], "truncated": false, "filtered_table_rows_count": 23, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA432257", "p2": "Chlamydiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA432257&tax_phylum=Chlamydiota", "results": [{"value": "PRJNA432257", "label": "PRJNA432257", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA432257&tax_phylum=Chlamydiota", "results": [{"value": "diamond", "label": "diamond", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA432257&tax_phylum=Chlamydiota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA432257&tax_phylum=Chlamydiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA432257&tax_phylum=Chlamydiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA432257&tax_phylum=Chlamydiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA432257&tax_phylum=Chlamydiota&tax_clade=PVC+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA432257&tax_phylum=Chlamydiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA432257&tax_phylum=Chlamydiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA432257&tax_phylum=Chlamydiota", "results": [{"value": "Chlamydiota", "label": "Chlamydiota", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA432257", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 430.4111399978865}