{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA416866\" and tax_phylum = \"Actinomycetota\"", "rows": [[419600, "PRJNA416866_P_NODE_1021_length_708_cov_4.897991_g886_i0", "PRJNA416866", "1021", "708", "4.897991", "34.67777628", "Propionibacteriaceae bacterium", "2021380", "Bacteria", "Bacteria", "223", "7.820000000000001e-71", "", "NR", "MCP3885490.1", "2021380", "g886", "i0", "72.5", "0.63135593220339", "149", "41", "63.1", "0", "31", "477", "3", "151", "MCP3885490.1 translation initiation factor IF-5A [Propionibacteriaceae bacterium]", "diamond", "447", "223", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", null, "Propionibacteriaceae bacterium"], [27455031, "PRJNA416866_P_NODE_7523_length_236_cov_1.120000_g7379_i0", "PRJNA416866", "7523", "236", "1.12", "2.6432", "Actinobacteria bacterium RBG_16_7", "2900548", "Bacteria", "Bacteria", "68.9", "1.6e-11", "", "NR", "OFW52635.1", "1797205", "g7379", "i0", "45.1", "1.80508474576271", "71", "38", "90.3", "1", "8", "220", "9", "78", "OFW52635.1 MAG: hypothetical protein A2V75_08425 [Actinobacteria bacterium RBG_16_70_17]", "diamond", "426", "68.9", "1", "Bacteria", null, "Bacillati", "Actinomycetota", null, null, null, null, "Actinobacteria bacterium RBG_16_70_17"], [27644481, "PRJNA416866_P_NODE_4944_length_295_cov_1.094017_g4800_i0", "PRJNA416866", "4944", "295", "1.094017", "3.22735015", "Baekduia sp.", "2600305", "Bacteria", "Bacteria", "43.5", "0.0344", "", "NR", "WP_327467491.1", "2600305", "g4800", "i0", "36.7", "0.803389830508475", "79", "35", "73.2", "4", "235", "20", "189", "259", "WP_327467491.1 ubiquinol-cytochrome c reductase iron-sulfur subunit [Baekduia sp.]", "diamond", "237", "43.5", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Thermoleophilia", "Solirubrobacterales", "Baekduiaceae", "Baekduia", "Baekduia sp."], [28102753, "PRJNA416866_P_NODE_8285_length_224_cov_1.582822_g8141_i0", "PRJNA416866", "8285", "224", "1.582822", "3.54552128", "Bacillati", "1783272", "Bacteria", "Bacteria", "61.6", "6.41e-9", "", "NR", "WP_207387496.1", "1306540", "g8141", "i0", "55.9", "7.03125", "59", "26", "79", "0", "3", "179", "447", "505", "WP_207387496.1 protein kinase domain-containing protein [Protofrankia symbiont of Coriaria myrtifolia]", "diamond", "1575", "61.6", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Frankiales", "Frankiaceae", "Protofrankia", "Protofrankia symbiont of Coriaria myrtifolia"], [28149544, "PRJNA416866_P_NODE_2765_length_407_cov_3.393064_g2622_i0", "PRJNA416866", "2765", "407", "3.393064", "13.80977048", "Solirubrobacteraceae bacterium", "2586742", "Bacteria", "Bacteria", "75.5", "4.81e-13", "", "NR", "HEV7885180.1", "2586742", "g2622", "i0", "36.7", "0.722358722358722", "98", "62", "72.2", "0", "113", "406", "207", "304", "HEV7885180.1 hypothetical protein [Solirubrobacteraceae bacterium]", "diamond", "294", "75.5", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Thermoleophilia", "Solirubrobacterales", "Solirubrobacteraceae", null, "Solirubrobacteraceae bacterium"], [28323802, "PRJNA416866_P_NODE_8406_length_222_cov_2.080745_g8262_i0", "PRJNA416866", "8406", "222", "2.080745", "4.6192539", "PVC group", "1783257", "Bacteria", "Bacteria", "48.5", "2.65e-4", "", "NR", "WP_093263124.1", "35622", "g8262", "i0", "53.7", "4.35135135135135", "41", "19", "55.4", "0", "183", "61", "15", "55", "WP_093263124.1 serine/threonine-protein kinase [Thermostaphylospora chromogena]", "diamond", "966", "48.5", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Streptosporangiales", "Thermomonosporaceae", "Thermostaphylospora", "Thermostaphylospora chromogena"], [28608094, "PRJNA416866_P_NODE_7207_length_241_cov_1.777778_g7063_i0", "PRJNA416866", "7207", "241", "1.777778", "4.28444498", "root", "1", "Root_unresolved", "Root_unresolved", "110", "8.54e-27", "", "NR", "WP_163768864.1", "39692", "g7063", "i0", "75.8", "7.40663900414938", "66", "16", "82.2", "0", "239", "42", "52", "117", "WP_163768864.1 NAD(P)-dependent alcohol dehydrogenase [Mycolicibacterium parafortuitum]", "diamond", "1785", "110", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Mycobacteriaceae", "Mycolicibacterium", "Mycolicibacterium parafortuitum"], [28749361, "PRJNA416866_P_NODE_7747_length_232_cov_1.812865_g7603_i0", "PRJNA416866", "7747", "232", "1.812865", "4.2058468", "Actinomycetota bacterium", "2900548", "Bacteria", "Bacteria", "64.3", "7.97e-10", "", "NR", "MSW82988.1", "2900548", "g7603", "i0", "42.9", "1.2801724137931", "56", "32", "72.4", "0", "64", "231", "135", "190", "MSW82988.1 hypothetical protein [Actinomycetota bacterium]", "diamond", "297", "64.3", "1", "Bacteria", null, "Bacillati", "Actinomycetota", null, null, null, null, "Actinomycetota bacterium"], [29285962, "PRJNA416866_P_NODE_3569_length_353_cov_1.534247_g3426_i0", "PRJNA416866", "3569", "353", "1.534247", "5.41589191", "Microbacteriaceae bacterium", "1873462", "Bacteria", "Bacteria", "62.8", "3.22e-9", "", "NR", "MDO4241565.1", "1873462", "g3426", "i0", "35.5", "1.02832861189802", "121", "52", "98.6", "4", "3", "350", "68", "167", "MDO4241565.1 adenylate kinase [Microbacteriaceae bacterium]", "diamond", "363", "62.8", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", null, "Microbacteriaceae bacterium"], [29285965, "PRJNA416866_P_NODE_4489_length_311_cov_1.308000_g4346_i0", "PRJNA416866", "4489", "311", "1.308", "4.06788", "Microbacteriaceae bacterium", "1873462", "Bacteria", "Bacteria", "52", "1.11e-5", "", "NR", "MBX9717869.1", "1873462", "g4346", "i0", "37.7", "0.51125401929260506", "53", "33", "51.1", "0", "236", "78", "38", "90", "MBX9717869.1 hypothetical protein [Microbacteriaceae bacterium]", "diamond", "159", "52", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", null, "Microbacteriaceae bacterium"], [29822636, "PRJNA416866_P_NODE_7591_length_235_cov_1.080460_g7447_i0", "PRJNA416866", "7591", "235", "1.08046", "2.539081", "Actinomadura sp. 1N219", "3375152", "Bacteria", "Bacteria", "43.9", "0.0132", "", "NR", "WP_395980051.1", "3375152", "g7447", "i0", "36.1", "0.919148936170213", "72", "46", "91.9", "0", "8", "223", "256", "327", "WP_395980051.1 MFS transporter [Actinomadura sp. 1N219]", "diamond", "216", "43.9", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Streptosporangiales", "Thermomonosporaceae", "Actinomadura", "Actinomadura sp. 1N219"], [30455091, "PRJNA416866_P_NODE_10093_length_207_cov_0.876712_g9949_i0", "PRJNA416866", "10093", "207", "0.876712", "1.81479384", "Mycobacteriaceae bacterium", "2448780", "Bacteria", "Bacteria", "64.7", "3.75e-10", "", "NR", "MBX9641612.1", "2448780", "g9949", "i0", "47.8", "0.971014492753623", "67", "32", "97.1", "1", "201", "1", "14", "77", "MBX9641612.1 TLD domain-containing protein [Mycobacteriaceae bacterium]", "diamond", "201", "64.7", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Mycobacteriaceae", null, "Mycobacteriaceae bacterium"], [30644145, "PRJNA416866_P_NODE_10813_length_204_cov_1.678322_g10669_i0", "PRJNA416866", "10813", "204", "1.678322", "3.42377688", "Solirubrobacteraceae bacterium", "2586742", "Bacteria", "Bacteria", "87.8", "1e-18", "", "NR", "MDO9352533.1", "2586742", "g10669", "i0", "65.6", "1.88235294117647", "64", "21", "94.1", "1", "11", "202", "53", "115", "MDO9352533.1 Sir2 family NAD-dependent protein deacetylase [Solirubrobacteraceae bacterium]", "diamond", "384", "87.8", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Thermoleophilia", "Solirubrobacterales", "Solirubrobacteraceae", null, "Solirubrobacteraceae bacterium"], [30644147, "PRJNA416866_P_NODE_11333_length_203_cov_0.901408_g11189_i0", "PRJNA416866", "11333", "203", "0.901408", "1.82985824", "Actinomycetota bacterium", "2900548", "Bacteria", "Bacteria", "42.4", "0.0302", "", "NR", "MDQ4010117.1", "2900548", "g11189", "i0", "39.7", "0.931034482758621", "63", "32", "93.1", "2", "8", "196", "37", "93", "MDQ4010117.1 phosphatase PAP2 family protein [Actinomycetota bacterium]", "diamond", "189", "42.4", "1", "Bacteria", null, "Bacillati", "Actinomycetota", null, null, null, null, "Actinomycetota bacterium"], [31592779, "PRJNA416866_P_NODE_6356_length_258_cov_1.817259_g6212_i0", "PRJNA416866", "6356", "258", "1.817259", "4.68852822", "Actinoallomurus vinaceus", "1080074", "Bacteria", "Bacteria", "49.7", "1.69e-4", "", "NR", "WP_345435951.1", "1080074", "g6212", "i0", "50", "1.59302325581395", "54", "27", "62.8", "0", "97", "258", "567", "620", "WP_345435951.1 amino acid adenylation domain-containing protein [Actinoallomurus vinaceus]", "diamond", "411", "49.7", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Streptosporangiales", "Thermomonosporaceae", "Actinoallomurus", "Actinoallomurus vinaceus"], [31798786, "PRJNA416866_P_NODE_11477_length_202_cov_0.907801_g11333_i0", "PRJNA416866", "11477", "202", "0.907801", "1.83375802", "Bacteria", "2", "Bacteria", "Bacteria", "60.1", "1.4e-8", "", "NR", "MFT6393132.1", "1967498", "g11333", "i0", "58.5", "8.5990099009901", "53", "22", "78.7", "0", "41", "199", "2", "54", "MFT6393132.1 NAD(P)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) [Ilumatobacter sp.]", "diamond", "1737", "60.1", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Acidimicrobiia", "Acidimicrobiales", "Ilumatobacteraceae", "Ilumatobacter", "Ilumatobacter sp."], [31845508, "PRJNA416866_P_NODE_7237_length_241_cov_0.822222_g7093_i0", "PRJNA416866", "7237", "241", "0.822222", "1.98155502", "Microbacteriaceae bacterium", "1873462", "Bacteria", "Bacteria", "57", "5.83e-8", "", "NR", "MBX9717869.1", "1873462", "g7093", "i0", "61.5", "0.485477178423237", "39", "15", "48.5", "0", "123", "239", "41", "79", "MBX9717869.1 hypothetical protein [Microbacteriaceae bacterium]", "diamond", "117", "57", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", null, "Microbacteriaceae bacterium"], [31940363, "PRJNA416866_P_NODE_9637_length_209_cov_0.864865_g9493_i0", "PRJNA416866", "9637", "209", "0.864865", "1.80756785", "Acidimicrobiales bacterium", "2201156", "Bacteria", "Bacteria", "102", "2.2399999999999998e-23", "", "NR", "MCU1357160.1", "2201156", "g9493", "i0", "69.4", "3.38755980861244", "62", "19", "89", "0", "207", "22", "563", "624", "MCU1357160.1 primary-amine oxidase [Acidimicrobiales bacterium]", "diamond", "708", "102", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Acidimicrobiia", "Acidimicrobiales", null, null, "Acidimicrobiales bacterium"], [31972130, "PRJNA416866_P_NODE_6258_length_260_cov_1.628141_g6114_i0", "PRJNA416866", "6258", "260", "1.628141", "4.2331666", "Streptomyces sp. NPDC", "1931", "Bacteria", "Bacteria", "42.7", "0.0473", "", "NR", "WP_403467419.1", "3366069", "g6114", "i0", "36", "0.865384615384615", "75", "46", "86.5", "2", "3", "227", "119", "191", "WP_403467419.1 SAV_2336 N-terminal domain-related protein [Streptomyces sp. NPDC096013]", "diamond", "225", "42.7", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces sp. NPDC096013"], [32083696, "PRJNA416866_P_NODE_4858_length_298_cov_1.628692_g4714_i0", "PRJNA416866", "4858", "298", "1.628692", "4.85350216", "Bacteria candidate phyla", "1783234", "Bacteria", "Bacteria", "87.8", "1.02e-17", "", "NR", "HEY2197241.1", "1785", "g4714", "i0", "51.2", "9.59395973154362", "86", "42", "86.6", "0", "260", "3", "425", "510", "HEY2197241.1 NHL repeat-containing protein [Mycobacterium sp.]", "diamond", "2859", "88.6", "0.99097065462754", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Mycobacteriaceae", "Mycobacterium", "Mycobacterium sp."], [32193756, "PRJNA416866_P_NODE_9878_length_208_cov_0.870748_g9734_i0", "PRJNA416866", "9878", "208", "0.870748", "1.81115584", "Nocardioides sp.", "35761", "Bacteria", "Bacteria", "65.1", "2.91e-10", "", "NR", "WP_324499474.1", "35761", "g9734", "i0", "50.7", "0.966346153846154", "67", "25", "96.6", "1", "1", "201", "103", "161", "WP_324499474.1 hypothetical protein [Nocardioides sp.]", "diamond", "201", "65.1", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Nocardioidaceae", "Nocardioides", "Nocardioides sp."], [32621300, "PRJNA416866_P_NODE_3180_length_376_cov_7.361905_g3037_i0", "PRJNA416866", "3180", "376", "7.361905", "27.6807628", "Streptomyces", "1883", "Bacteria", "Bacteria", "43.5", "0.04", "", "NR", "WP_260634659.1", "285578", "g3037", "i0", "48.6", "0.558510638297872", "35", "15", "27.9", "1", "223", "119", "129", "160", "WP_260634659.1 hypothetical protein [Streptomyces angustmyceticus]", "diamond", "210", "43.5", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces angustmyceticus"], [32762231, "PRJNA416866_P_NODE_2000_length_485_cov_1.478774_g1858_i0", "PRJNA416866", "2000", "485", "1.478774", "7.1720539", "Branchiibius hedensis", "672460", "Bacteria", "Bacteria", "117", "1.9000000000000003e-28", "", "NR", "WP_172461504.1", "672460", "g1858", "i0", "68.8", "0.977319587628866", "80", "25", "49.5", "0", "35", "274", "260", "339", "WP_172461504.1 alcohol dehydrogenase AdhP [Branchiibius hedensis]", "diamond", "474", "117", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Dermacoccaceae", "Branchiibius", "Branchiibius hedensis"], [32856637, "PRJNA416866_P_NODE_5080_length_291_cov_1.113043_g4936_i0", "PRJNA416866", "5080", "291", "1.113043", "3.23895513", "Thermoleophilaceae bacterium", "2732252", "Bacteria", "Bacteria", "43.1", "0.0497", "", "NR", "MBJ7347507.1", "2732252", "g4936", "i0", "46", "0.515463917525773", "50", "24", "50.5", "2", "223", "77", "1042", "1089", "MBJ7347507.1 hypothetical protein [Thermoleophilaceae bacterium]", "diamond", "150", "43.1", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Thermoleophilia", "Thermoleophilales", "Thermoleophilaceae", null, "Thermoleophilaceae bacterium"], [32888015, "PRJNA416866_P_NODE_3500_length_358_cov_1.292929_g3357_i0", "PRJNA416866", "3500", "358", "1.292929", "4.62868582", "Microbacteriaceae bacterium", "1873462", "Bacteria", "Bacteria", "46.2", "0.00266", "", "NR", "MBX9717869.1", "1873462", "g3357", "i0", "42.9", "0.35195530726257", "42", "24", "35.2", "0", "128", "3", "40", "81", "MBX9717869.1 hypothetical protein [Microbacteriaceae bacterium]", "diamond", "126", "46.2", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", null, "Microbacteriaceae bacterium"]], "truncated": false, "filtered_table_rows_count": 25, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA416866", "p2": "Actinomycetota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA416866&tax_phylum=Actinomycetota", "results": [{"value": "PRJNA416866", "label": "PRJNA416866", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA416866&tax_phylum=Actinomycetota", "results": [{"value": "diamond", "label": "diamond", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA416866&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA416866&tax_phylum=Actinomycetota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA416866&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA416866&tax_phylum=Actinomycetota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA416866&tax_phylum=Actinomycetota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA416866&tax_phylum=Actinomycetota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA416866&tax_phylum=Actinomycetota", "results": [{"value": "Actinomycetota", "label": "Actinomycetota", "count": 25, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA416866", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 319.1684459998214}