{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA385073\" and tax_phylum = \"Verrucomicrobiota\"", "rows": [[405876, "PRJNA385073_P_NODE_32101_length_273_cov_1.475000_g31939_i0", "PRJNA385073", "32101", "273", "1.475", "4.02675", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "128", "3.67e-32", "", "NR", "GDY20605.1", "2026799", "g31939", "i0", "72.2", "3.95604395604396", "90", "25", "98.9", "0", "271", "2", "440", "529", "GDY20605.1 ATPase [Verrucomicrobiota bacterium]", "diamond", "1080", "128", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [8058792, "PRJNA385073_P_NODE_15427_length_349_cov_1.115942_g15266_i0", "PRJNA385073", "15427", "349", "1.115942", "3.89463758", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "214", "1.6e-66", "", "NR", "MBR5605082.1", "2026799", "g15266", "i0", "91.3", "1.97707736389685", "115", "10", "98.9", "0", "347", "3", "140", "254", "MBR5605082.1 elongation factor Tu [Verrucomicrobiota bacterium]", "diamond", "690", "214", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [19532374, "PRJNA385073_P_NODE_62756_length_226_cov_3.830065_g62594_i0", "PRJNA385073", "62756", "226", "3.830065", "8.6559469", "Opitutaceae bacterium", "2006848", "Bacteria", "Bacteria", "104", "3.07e-25", "", "NR", "MBK8856971.1", "2006848", "g62594", "i0", "74.3", "1.95132743362832", "74", "19", "98.2", "0", "224", "3", "181", "254", "MBK8856971.1 formate dehydrogenase accessory sulfurtransferase FdhD [Opitutaceae bacterium]", "diamond", "441", "104", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Opitutia", "Opitutales", "Opitutaceae", null, "Opitutaceae bacterium"], [23357995, "PRJNA385073_P_NODE_35259_length_265_cov_1.302083_g35097_i0", "PRJNA385073", "35259", "265", "1.302083", "3.45051995", "Bacteria", "2", "Bacteria", "Bacteria", "153", "1.49e-44", "", "NR", "MEY2499979.1", "2026799", "g35097", "i0", "83", "8.96603773584906", "88", "15", "99.6", "0", "2", "265", "94", "181", "MEY2499979.1 7-cyano-7-deazaguanine synthase [Verrucomicrobiota bacterium]", "diamond", "2376", "154", "0.993506493506494", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [26726614, "PRJNA385073_P_NODE_31181_length_275_cov_4.297030_g31019_i0", "PRJNA385073", "31181", "275", "4.29703", "11.8168325", "Verrucomicrobiales bacterium VVV1", "2015575", "Bacteria", "Bacteria", "176", "8.28e-53", "", "NR", "OYV04468.1", "2015575", "g31019", "i0", "98.9", "1.98545454545455", "91", "1", "99.3", "0", "3", "275", "16", "106", "OYV04468.1 MAG: enoyl-CoA hydratase [Verrucomicrobiales bacterium VVV1]", "diamond", "546", "176", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", null, null, "Verrucomicrobiales bacterium VVV1"], [26917026, "PRJNA385073_P_NODE_63802_length_215_cov_4.119718_g63640_i0", "PRJNA385073", "63802", "215", "4.119718", "8.8573937", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "126", "1.38e-32", "", "NR", "KAB2646977.1", "2026799", "g63640", "i0", "91.5", "0.990697674418605", "71", "6", "99.1", "0", "214", "2", "345", "415", "KAB2646977.1 MAG: aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Verrucomicrobiota bacterium]", "diamond", "213", "126", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [28370004, "PRJNA385073_P_NODE_39866_length_254_cov_1.453039_g39704_i0", "PRJNA385073", "39866", "254", "1.453039", "3.69071906", "Verrucomicrobiia bacterium", "2499141", "Bacteria", "Bacteria", "141", "1.15e-39", "", "NR", "HEU0009020.1", "2499141", "g39704", "i0", "77.4", "3.95669291338583", "84", "19", "99.2", "0", "253", "2", "25", "108", "HEU0009020.1 3-deoxy-manno-octulosonate cytidylyltransferase [Verrucomicrobiia bacterium]", "diamond", "1005", "141", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "Verrucomicrobiia bacterium"], [28433260, "PRJNA385073_P_NODE_29586_length_280_cov_1.603865_g29424_i0", "PRJNA385073", "29586", "280", "1.603865", "4.490822", "Chthoniobacter sp.", "2510640", "Bacteria", "Bacteria", "167", "1.07e-47", "", "NR", "MCE9609141.1", "2510640", "g29424", "i0", "88.2", "1.97142857142857", "93", "11", "99.6", "0", "2", "280", "13", "105", "MCE9609141.1 DUF1501 domain-containing protein [Chthoniobacter sp.]", "diamond", "552", "167", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", "Chthoniobacteraceae", "Chthoniobacter", "Chthoniobacter sp."], [28496506, "PRJNA385073_P_NODE_49687_length_246_cov_0.890173_g49525_i0", "PRJNA385073", "49687", "246", "0.890173", "2.18982558", "Candidatus Methylacidiphilales bacterium", "2720631", "Bacteria", "Bacteria", "59.7", "3.75e-8", "", "NR", "MDX6765977.1", "2720631", "g49525", "i0", "93.3", "0.365853658536585", "30", "2", "36.6", "0", "1", "90", "310", "339", "MDX6765977.1 hypothetical protein [Candidatus Methylacidiphilales bacterium]", "diamond", "90", "59.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Methylacidiphilae", "Methylacidiphilales", null, null, "Candidatus Methylacidiphilales bacterium"], [28496511, "PRJNA385073_P_NODE_59107_length_241_cov_0.916667_g58945_i0", "PRJNA385073", "59107", "241", "0.916667", "2.20916747", "Verrucomicrobiales bacterium", "2026801", "Bacteria", "Bacteria", "181", "7.4e-53", "", "NR", "MBL9169239.1", "2026801", "g58945", "i0", "100", "0.995850622406639", "80", "0", "99.6", "0", "1", "240", "61", "140", "MBL9169239.1 DUF1501 domain-containing protein [Verrucomicrobiales bacterium]", "diamond", "240", "181", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", null, null, "Verrucomicrobiales bacterium"], [29018709, "PRJNA385073_P_NODE_37928_length_258_cov_4.081081_g37766_i0", "PRJNA385073", "37928", "258", "4.081081", "10.52918898", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "92.4", "6.09e-20", "", "NR", "MBS0648531.1", "2026799", "g37766", "i0", "55.9", "9.02325581395349", "68", "30", "79.1", "0", "54", "257", "1", "68", "MBS0648531.1 glycosyltransferase [Verrucomicrobiota bacterium]", "diamond", "2328", "92.4", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [29064816, "PRJNA385073_P_NODE_39388_length_255_cov_1.692308_g39226_i0", "PRJNA385073", "39388", "255", "1.692308", "4.3153854", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "145", "1.4e-40", "", "NR", "MEW6157827.1", "2026799", "g39226", "i0", "81.4", "1.01176470588235", "86", "15", "100", "1", "1", "255", "194", "279", "MEW6157827.1 type II secretion system protein [Verrucomicrobiota bacterium]", "diamond", "258", "145", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [29222765, "PRJNA385073_P_NODE_42089_length_251_cov_0.865169_g41927_i0", "PRJNA385073", "42089", "251", "0.865169", "2.17157419", "Verrucomicrobiales bacterium", "2026801", "Bacteria", "Bacteria", "72.8", "4.22e-13", "", "NR", "MDB4617038.1", "2026801", "g41927", "i0", "58", "0.597609561752988", "50", "21", "59.8", "0", "251", "102", "218", "267", "MDB4617038.1 hypothetical protein [Verrucomicrobiales bacterium]", "diamond", "150", "72.8", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", null, null, "Verrucomicrobiales bacterium"], [29727477, "PRJNA385073_P_NODE_45330_length_249_cov_0.875000_g45168_i0", "PRJNA385073", "45330", "249", "0.875", "2.17875", "Akkermansia sp.", "1872421", "Bacteria", "Bacteria", "42.7", "0.0412", "", "NR", "MBQ3525357.1", "1872421", "g45168", "i0", "40.8", "0.855421686746988", "71", "38", "84.3", "2", "37", "246", "473", "540", "MBQ3525357.1 4Fe-4S dicluster domain-containing protein [Akkermansia sp.]", "diamond", "213", "42.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", "Verrucomicrobiales", "Akkermansiaceae", "Akkermansia", "Akkermansia sp."], [29980451, "PRJNA385073_P_NODE_60911_length_234_cov_3.335404_g60749_i0", "PRJNA385073", "60911", "234", "3.335404", "7.80484536", "Chthoniobacterales bacterium", "2201154", "Bacteria", "Bacteria", "63.2", "2e-9", "", "NR", "MBA3544279.1", "2201154", "g60749", "i0", "84.8", "0.423076923076923", "33", "5", "42.3", "0", "134", "36", "392", "424", "MBA3544279.1 IS256 family transposase [Chthoniobacterales bacterium]", "diamond", "99", "63.2", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", null, null, "Chthoniobacterales bacterium"], [30233178, "PRJNA385073_P_NODE_53652_length_244_cov_0.900585_g53490_i0", "PRJNA385073", "53652", "244", "0.900585", "2.1974274", "Chthoniobacteraceae bacterium", "2811408", "Bacteria", "Bacteria", "138", "1.4e-36", "", "NR", "HWL53260.1", "2811408", "g53490", "i0", "76.5", "0.995901639344262", "81", "19", "99.6", "0", "1", "243", "75", "155", "HWL53260.1 nitronate monooxygenase [Chthoniobacteraceae bacterium]", "diamond", "243", "138", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", "Chthoniobacteraceae", null, "Chthoniobacteraceae bacterium"], [30833490, "PRJNA385073_P_NODE_58614_length_241_cov_0.916667_g58452_i0", "PRJNA385073", "58614", "241", "0.916667", "2.20916747", "Verrucomicrobiia bacterium", "2499141", "Bacteria", "Bacteria", "164", "2.08e-45", "", "NR", "NCC60166.1", "2499141", "g58452", "i0", "96.3", "0.995850622406639", "80", "3", "99.6", "0", "240", "1", "197", "276", "NCC60166.1 squalene--hopene cyclase [Verrucomicrobiia bacterium]", "diamond", "240", "164", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "Verrucomicrobiia bacterium"], [30928393, "PRJNA385073_P_NODE_49194_length_246_cov_3.225434_g49032_i0", "PRJNA385073", "49194", "246", "3.225434", "7.93456764", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "119", "5.48e-30", "", "NR", "MBM3835062.1", "2026799", "g49032", "i0", "64.6", "2.98780487804878", "82", "29", "100", "0", "1", "246", "154", "235", "MBM3835062.1 Gfo/Idh/MocA family oxidoreductase [Verrucomicrobiota bacterium]", "diamond", "735", "119", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [30991587, "PRJNA385073_P_NODE_56514_length_242_cov_0.911243_g56352_i0", "PRJNA385073", "56514", "242", "0.911243", "2.20520806", "Chthoniobacteraceae bacterium", "2811408", "Bacteria", "Bacteria", "63.2", "2.29e-9", "", "NR", "MEO6755104.1", "2811408", "g56352", "i0", "45.3", "1.06611570247934", "86", "41", "99.2", "1", "240", "1", "271", "356", "MEO6755104.1 hypothetical protein [Chthoniobacteraceae bacterium]", "diamond", "258", "63.2", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", "Chthoniobacteraceae", null, "Chthoniobacteraceae bacterium"], [31324342, "PRJNA385073_P_NODE_63555_length_218_cov_4.889655_g63393_i0", "PRJNA385073", "63555", "218", "4.889655", "10.6594479", "Chthoniobacter", "295577", "Bacteria", "Bacteria", "120", "3.1599999999999997e-32", "", "NR", "MEA3211714.1", "2510640", "g63393", "i0", "80.3", "4.87155963302752", "71", "14", "97.7", "0", "3", "215", "62", "132", "MEA3211714.1 dependent ligase domain [Chthoniobacter sp.]", "diamond", "1062", "121", "0.991735537190083", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", "Chthoniobacteraceae", "Chthoniobacter", "Chthoniobacter sp."], [31718740, "PRJNA385073_P_NODE_60757_length_235_cov_2.537037_g60595_i0", "PRJNA385073", "60757", "235", "2.537037", "5.96203695", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "44.7", "7.87e-4", "", "NR", "PYJ33491.1", "2026799", "g60595", "i0", "49", "0.651063829787234", "51", "25", "65.1", "1", "231", "79", "9", "58", "PYJ33491.1 MAG: hypothetical protein DME79_06080 [Verrucomicrobiota bacterium]", "diamond", "153", "44.7", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [31971742, "PRJNA385073_P_NODE_62638_length_227_cov_2.500000_g62476_i0", "PRJNA385073", "62638", "227", "2.5", "5.675", "Chthoniobacteraceae bacterium", "2811408", "Bacteria", "Bacteria", "63.5", "1.37e-9", "", "NR", "MDB6173931.1", "2811408", "g62476", "i0", "78", "3.29074889867841", "41", "9", "54.2", "0", "226", "104", "413", "453", "MDB6173931.1 Fis family transcriptional regulator [Chthoniobacteraceae bacterium]", "diamond", "747", "63.5", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Spartobacteria", "Chthoniobacterales", "Chthoniobacteraceae", null, "Chthoniobacteraceae bacterium"], [32288544, "PRJNA385073_P_NODE_35099_length_265_cov_2.078125_g34937_i0", "PRJNA385073", "35099", "265", "2.078125", "5.50703125", "Verrucomicrobiota bacterium", "2026799", "Bacteria", "Bacteria", "107", "4.9300000000000005e-27", "", "NR", "MEI6342320.1", "2026799", "g34937", "i0", "60.3", "0.883018867924528", "78", "31", "88.3", "0", "237", "4", "2", "79", "MEI6342320.1 hypothetical protein [Verrucomicrobiota bacterium]", "diamond", "234", "107", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", null, null, null, null, "Verrucomicrobiota bacterium"], [32573185, "PRJNA385073_P_NODE_40579_length_252_cov_2.374302_g40417_i0", "PRJNA385073", "40579", "252", "2.374302", "5.98324104", "Verrucomicrobiia bacterium", "2499141", "Bacteria", "Bacteria", "102", "3.11e-24", "", "NR", "HEV8543894.1", "2499141", "g40417", "i0", "59.8", "1.97619047619048", "82", "33", "97.6", "0", "7", "252", "190", "271", "HEV8543894.1 hypothetical protein [Verrucomicrobiia bacterium]", "diamond", "498", "102", "1", "Bacteria", "PVC group", "Pseudomonadati", "Verrucomicrobiota", "Verrucomicrobiia", null, null, null, "Verrucomicrobiia bacterium"]], "truncated": false, "filtered_table_rows_count": 24, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA385073", "p2": "Verrucomicrobiota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA385073&tax_phylum=Verrucomicrobiota", "results": [{"value": "PRJNA385073", "label": "PRJNA385073", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA385073&tax_phylum=Verrucomicrobiota", "results": [{"value": "diamond", "label": "diamond", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA385073&tax_phylum=Verrucomicrobiota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA385073&tax_phylum=Verrucomicrobiota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA385073&tax_phylum=Verrucomicrobiota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA385073&tax_phylum=Verrucomicrobiota", "results": [{"value": "PVC group", "label": "PVC group", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA385073&tax_phylum=Verrucomicrobiota&tax_clade=PVC+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA385073&tax_phylum=Verrucomicrobiota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA385073&tax_phylum=Verrucomicrobiota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA385073&tax_phylum=Verrucomicrobiota", "results": [{"value": "Verrucomicrobiota", "label": "Verrucomicrobiota", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA385073", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 279.44317999936175}