{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA380416\" and tax_phylum = \"Bacteroidota\"", "rows": [[15704711, "PRJNA380416_P_NODE_11413_length_167_cov_0.864407_g11266_i0", "PRJNA380416", "11413", "167", "0.864407", "1.44355969", "Paenimyroides aestuarii", "2968490", "Bacteria", "Bacteria", "93.2", "1.3e-20", "", "NR", "WP_257500167.1", "2968490", "g11266", "i0", "86.3", "1.81437125748503", "51", "7", "91.6", "0", "6", "158", "358", "408", "WP_257500167.1 GTPase HflX [Paenimyroides aestuarii]", "diamond", "303", "93.2", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Flavobacteriaceae", "Paenimyroides", "Paenimyroides aestuarii"], [27028782, "PRJNA380416_P_NODE_13122_length_163_cov_0.894737_g12975_i0", "PRJNA380416", "13122", "163", "0.894737", "1.45842131", "Flavobacterium", "237", "Bacteria", "Bacteria", "109", "4.59e-29", "", "NR", "WP_396163939.1", "239", "g12975", "i0", "98.1", "6.80981595092025", "53", "1", "97.5", "0", "3", "161", "19", "71", "WP_396163939.1 GNAT family N-acetyltransferase, partial [Flavobacterium sp.]", "diamond", "1110", "109", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Flavobacteriaceae", "Flavobacterium", "Flavobacterium sp."], [27391254, "PRJNA380416_P_NODE_12163_length_165_cov_0.879310_g12016_i0", "PRJNA380416", "12163", "165", "0.87931", "1.4508615", "Haliscomenobacter sp.", "2717303", "Bacteria", "Bacteria", "45.1", "0.00136", "", "NR", "WP_353480152.1", "2717303", "g12016", "i0", "43.8", "2.69090909090909", "48", "27", "87.3", "0", "154", "11", "31", "78", "WP_353480152.1 GIY-YIG nuclease family protein [Haliscomenobacter sp.]", "diamond", "444", "45.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Saprospiria", "Saprospirales", "Haliscomenobacteraceae", "Haliscomenobacter", "Haliscomenobacter sp."], [27422903, "PRJNA380416_P_NODE_11463_length_167_cov_0.864407_g11316_i0", "PRJNA380416", "11463", "167", "0.864407", "1.44355969", "Bacteroidota bacterium", "1898104", "Bacteria", "Bacteria", "64.3", "3.07e-11", "", "NR", "RMF20796.1", "1898104", "g11316", "i0", "51", "2.67664670658683", "49", "24", "88", "0", "21", "167", "3", "51", "RMF20796.1 MAG: VOC family protein [Bacteroidota bacterium]", "diamond", "447", "64.3", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", null, null, null, null, "Bacteroidota bacterium"], [28054031, "PRJNA380416_P_NODE_11785_length_166_cov_0.871795_g11638_i0", "PRJNA380416", "11785", "166", "0.871795", "1.4471797", "Niabella sp.", "1962976", "Bacteria", "Bacteria", "50.4", "2.43e-5", "", "NR", "WP_300601877.1", "1962976", "g11638", "i0", "48.1", "0.939759036144578", "52", "27", "94", "0", "165", "10", "138", "189", "WP_300601877.1 NAD(P)/FAD-dependent oxidoreductase [Niabella sp.]", "diamond", "156", "50.4", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Chitinophagia", "Chitinophagales", "Chitinophagaceae", "Niabella", "Niabella sp."], [28401468, "PRJNA380416_P_NODE_13526_length_162_cov_0.902655_g13379_i0", "PRJNA380416", "13526", "162", "0.902655", "1.4623011", "Sphingobacteriia bacterium", "2035813", "Bacteria", "Bacteria", "110", "1.92e-28", "", "NR", "MBN8837013.1", "2035813", "g13379", "i0", "100", "1", "54", "0", "100", "0", "1", "162", "27", "80", "MBN8837013.1 LUD domain-containing protein [Sphingobacteriia bacterium]", "diamond", "162", "110", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Sphingobacteriia", null, null, null, "Sphingobacteriia bacterium"], [28576297, "PRJNA380416_P_NODE_12327_length_165_cov_0.879310_g12180_i0", "PRJNA380416", "12327", "165", "0.87931", "1.4508615", "Chitinophagaceae", "563835", "Bacteria", "Bacteria", "95.1", "4.52e-21", "", "NR", "MBX9782077.1", "1869212", "g12180", "i0", "81.5", "9.81818181818182", "54", "10", "98.2", "0", "2", "163", "132", "185", "MBX9782077.1 VCBS repeat-containing protein [Chitinophagaceae bacterium]", "diamond", "1620", "95.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Chitinophagia", "Chitinophagales", "Chitinophagaceae", null, "Chitinophagaceae bacterium"], [28811597, "PRJNA380416_P_NODE_13648_length_162_cov_0.849558_g13501_i0", "PRJNA380416", "13648", "162", "0.849558", "1.37628396", "Aurantibacillus circumpalustris", "3036359", "Bacteria", "Bacteria", "41.2", "0.0457", "", "NR", "WP_317899087.1", "3036359", "g13501", "i0", "38.9", "1", "54", "32", "98.1", "1", "1", "159", "47", "100", "WP_317899087.1 glycine-rich protein [Aurantibacillus circumpalustris]", "diamond", "162", "41.2", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Sphingobacteriia", "Sphingobacteriales", "Aurantibacillaceae", "Aurantibacillus", "Aurantibacillus circumpalustris"], [29664047, "PRJNA380416_P_NODE_12930_length_163_cov_0.894737_g12783_i0", "PRJNA380416", "12930", "163", "0.894737", "1.45842131", "Cloacibacterium normanense", "237258", "Bacteria", "Bacteria", "107", "3.99e-26", "", "NR", "WP_374451376.1", "237258", "g12783", "i0", "100", "0.975460122699387", "53", "0", "97.5", "0", "161", "3", "183", "235", "WP_374451376.1 glycosyltransferase [Cloacibacterium normanense]", "diamond", "159", "107", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Weeksellaceae", "Cloacibacterium", "Cloacibacterium normanense"], [29727274, "PRJNA380416_P_NODE_14050_length_161_cov_0.910714_g13903_i0", "PRJNA380416", "14050", "161", "0.910714", "1.46624954", "Spirosoma foliorum", "2710596", "Bacteria", "Bacteria", "56.2", "1.69e-7", "", "NR", "WP_182462686.1", "2710596", "g13903", "i0", "48.1", "4.90062111801242", "52", "27", "96.9", "0", "158", "3", "91", "142", "WP_182462686.1 phosphoribosyltransferase family protein [Spirosoma foliorum]", "diamond", "789", "56.2", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Cytophagia", "Cytophagales", "Cytophagaceae", "Spirosoma", "Spirosoma foliorum"], [29758991, "PRJNA380416_P_NODE_13891_length_161_cov_0.910714_g13744_i0", "PRJNA380416", "13891", "161", "0.910714", "1.46624954", "Sphingobacteriia bacterium", "2035813", "Bacteria", "Bacteria", "87.8", "1.61e-18", "", "NR", "MBN8838162.1", "2035813", "g13744", "i0", "100", "0.801242236024845", "43", "0", "80.1", "0", "1", "129", "794", "836", "MBN8838162.1 ligase-associated DNA damage response DEXH box helicase [Sphingobacteriia bacterium]", "diamond", "129", "87.8", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Sphingobacteriia", null, null, null, "Sphingobacteriia bacterium"], [30186696, "PRJNA380416_P_NODE_11352_length_167_cov_0.864407_g11205_i0", "PRJNA380416", "11352", "167", "0.864407", "1.44355969", "Bacteria", "2", "Bacteria", "Bacteria", "86.3", "2.94e-18", "", "NR", "MDN5329286.1", "2030927", "g11205", "i0", "66.7", "1.8502994011976", "51", "17", "91.6", "0", "12", "164", "129", "179", "MDN5329286.1 hypothetical protein [Bacteroidales bacterium]", "diamond", "309", "86.3", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Bacteroidia", "Bacteroidales", null, null, "Bacteroidales bacterium"], [30201173, "PRJNA380416_P_NODE_13452_length_162_cov_0.902655_g13305_i0", "PRJNA380416", "13452", "162", "0.902655", "1.4623011", "Haliscomenobacter sp.", "2717303", "Bacteria", "Bacteria", "44.7", "0.00129", "", "NR", "WP_324496331.1", "2717303", "g13305", "i0", "55.9", "0.62962962962963", "34", "15", "63", "0", "154", "53", "116", "149", "WP_324496331.1 response regulator transcription factor [Haliscomenobacter sp.]", "diamond", "102", "44.7", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Saprospiria", "Saprospirales", "Haliscomenobacteraceae", "Haliscomenobacter", "Haliscomenobacter sp."], [30264910, "PRJNA380416_P_NODE_3552_length_319_cov_5.088889_g3405_i0", "PRJNA380416", "3552", "319", "5.088889", "16.23355591", "Aureitalea sp. L", "1872661", "Bacteria", "Bacteria", "45.4", "0.0103", "", "NR", "WP_265198814.1", "2816962", "g3405", "i0", "40.4", "0.489028213166144", "52", "31", "48.9", "0", "165", "10", "252", "303", "WP_265198814.1 hybrid sensor histidine kinase/response regulator [Aureitalea sp. L0-47]", "diamond", "156", "45.4", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Flavobacteriaceae", "Aureitalea", "Aureitalea sp. L0-47"], [30517360, "PRJNA380416_P_NODE_13173_length_163_cov_0.894737_g13026_i0", "PRJNA380416", "13173", "163", "0.894737", "1.45842131", "Flavobacterium proteolyticum", "2911683", "Bacteria", "Bacteria", "104", "2.0199999999999998e-24", "", "NR", "WP_194096130.1", "2911683", "g13026", "i0", "94.3", "0.975460122699387", "53", "3", "97.5", "0", "3", "161", "133", "185", "WP_194096130.1 S8 family serine peptidase [Flavobacterium proteolyticum]", "diamond", "159", "104", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", "Flavobacteriales", "Flavobacteriaceae", "Flavobacterium", "Flavobacterium proteolyticum"], [31180520, "PRJNA380416_P_NODE_13555_length_162_cov_0.902655_g13408_i0", "PRJNA380416", "13555", "162", "0.902655", "1.4623011", "Chitinophagales bacterium", "2448779", "Bacteria", "Bacteria", "91.7", "5.46e-20", "", "NR", "MCZ2397875.1", "2448779", "g13408", "i0", "100", "0.777777777777778", "42", "0", "77.8", "0", "33", "158", "397", "438", "MCZ2397875.1 hypothetical protein [Chitinophagales bacterium]", "diamond", "126", "91.7", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Chitinophagia", "Chitinophagales", null, null, "Chitinophagales bacterium"], [31307285, "PRJNA380416_P_NODE_12595_length_164_cov_0.886957_g12448_i0", "PRJNA380416", "12595", "164", "0.886957", "1.45460948", "Roseivirga sp.", "1964215", "Bacteria", "Bacteria", "44.7", "0.00272", "", "NR", "MCE7992289.1", "1964215", "g12448", "i0", "46.7", "0.823170731707317", "45", "24", "82.3", "0", "139", "5", "528", "572", "MCE7992289.1 T9SS type A sorting domain-containing protein [Roseivirga sp.]", "diamond", "135", "44.7", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Cytophagia", "Cytophagales", "Roseivirgaceae", "Roseivirga", "Roseivirga sp."], [32161644, "PRJNA380416_P_NODE_13078_length_163_cov_0.894737_g12931_i0", "PRJNA380416", "13078", "163", "0.894737", "1.45842131", "Chitinophaga sp.", "1869181", "Bacteria", "Bacteria", "47.4", "2.69e-4", "", "NR", "MBA4197074.1", "1869181", "g12931", "i0", "100", "0.386503067484663", "21", "0", "38.7", "0", "3", "65", "256", "276", "MBA4197074.1 5-dehydro-4-deoxy-D-glucuronate isomerase [Chitinophaga sp.]", "diamond", "63", "47.4", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Chitinophagia", "Chitinophagales", "Chitinophagaceae", "Chitinophaga", "Chitinophaga sp."], [32319994, "PRJNA380416_P_NODE_2059_length_424_cov_2.074667_g1912_i0", "PRJNA380416", "2059", "424", "2.074667", "8.79658808", "Bacteroidia bacterium", "2044936", "Bacteria", "Bacteria", "53.1", "5.64e-5", "", "NR", "GJQ22129.1", "2044936", "g1912", "i0", "36.7", "0.693396226415094", "98", "52", "62.3", "3", "68", "331", "322", "419", "GJQ22129.1 MAG: hypothetical protein HBSIN02_24840 [Bacteroidia bacterium]", "diamond", "294", "53.1", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Bacteroidia", null, null, null, "Bacteroidia bacterium"]], "truncated": false, "filtered_table_rows_count": 19, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA380416", "p2": "Bacteroidota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA380416&tax_phylum=Bacteroidota", "results": [{"value": "PRJNA380416", "label": "PRJNA380416", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Bacteroidota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA380416&tax_phylum=Bacteroidota", "results": [{"value": "diamond", "label": "diamond", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA380416&tax_phylum=Bacteroidota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA380416&tax_phylum=Bacteroidota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA380416&tax_phylum=Bacteroidota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA380416&tax_phylum=Bacteroidota", "results": [{"value": "FCB group", "label": "FCB group", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA380416&tax_phylum=Bacteroidota&tax_clade=FCB+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA380416&tax_phylum=Bacteroidota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA380416&tax_phylum=Bacteroidota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA380416&tax_phylum=Bacteroidota", "results": [{"value": "Bacteroidota", "label": "Bacteroidota", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA380416", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 412.5061689992435}