{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA322517\" and tax_phylum = \"Mycoplasmatota\"", "rows": [[12547673, "PRJNA322517_P_NODE_1490_length_403_cov_2.929379_g1468_i0", "PRJNA322517", "1490", "403", "2.929379", "11.80539737", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "207", "2.64e-60", "", "NR", "WP_322536745.1", "2107", "g1468", "i0", "100", "0.789081885856079", "106", "0", "78.9", "0", "318", "1", "356", "461", "WP_322536745.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase [Mycoplasmopsis pulmonis]", "diamond", "318", "207", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [26757948, "PRJNA322517_P_NODE_3501_length_218_cov_3.597633_g3479_i0", "PRJNA322517", "3501", "218", "3.597633", "7.84283994", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "55.8", "6.52e-7", "", "NR", "WP_322536577.1", "2107", "g3479", "i0", "83.3", "0.990825688073395", "72", "12", "99.1", "0", "2", "217", "76", "147", "WP_322536577.1 hypothetical protein [Mycoplasmopsis pulmonis]", "diamond", "216", "55.8", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [27264337, "PRJNA322517_P_NODE_6243_length_161_cov_1.383929_g6221_i0", "PRJNA322517", "6243", "161", "1.383929", "2.22812569", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "79.7", "1.12e-15", "", "NR", "AAB41036.2", "2107", "g6221", "i0", "97.6", "1.56521739130435", "42", "1", "78.3", "0", "127", "2", "149", "190", "AAB41036.2 P93delta, partial [Mycoplasmopsis pulmonis]", "diamond", "252", "79.7", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [27295857, "PRJNA322517_P_NODE_3683_length_210_cov_2.521739_g3661_i0", "PRJNA322517", "3683", "210", "2.521739", "5.2956519", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "62", "4.01e-9", "", "NR", "WP_010925112.1", "2107", "g3661", "i0", "90.9", "0.471428571428571", "33", "3", "47.1", "0", "99", "1", "980", "1012", "WP_010925112.1 lipoprotein 17-related variable surface protein [Mycoplasmopsis pulmonis]", "diamond", "99", "62", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [27454012, "PRJNA322517_P_NODE_2223_length_321_cov_2.371324_g2201_i0", "PRJNA322517", "2223", "321", "2.371324", "7.61195004", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "178", "2.68e-49", "", "NR", "WP_010925112.1", "2107", "g2201", "i0", "86.7", "0.981308411214953", "105", "14", "98.1", "0", "317", "3", "570", "674", "WP_010925112.1 lipoprotein 17-related variable surface protein [Mycoplasmopsis pulmonis]", "diamond", "315", "178", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [28274616, "PRJNA322517_P_NODE_746_length_624_cov_20.401739_g724_i0", "PRJNA322517", "746", "624", "20.401739", "127.30685136", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "400", "2.42e-127", "", "NR", "WP_322536577.1", "2107", "g724", "i0", "100", "0.995192307692308", "207", "0", "99.5", "0", "623", "3", "870", "1076", "WP_322536577.1 hypothetical protein [Mycoplasmopsis pulmonis]", "diamond", "621", "400", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [28432654, "PRJNA322517_P_NODE_446_length_843_cov_16.434509_g428_i0", "PRJNA322517", "446", "843", "16.434509", "138.54291087", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "457", "1.45e-147", "", "NR", "WP_322536577.1", "2107", "g428", "i0", "86.5", "1", "281", "38", "100", "0", "843", "1", "1071", "1351", "WP_322536577.1 hypothetical protein [Mycoplasmopsis pulmonis]", "diamond", "843", "457", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [29095774, "PRJNA322517_P_NODE_4548_length_183_cov_3.246269_g4526_i0", "PRJNA322517", "4548", "183", "3.246269", "5.94067227", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "110", "2.29e-26", "", "NR", "WP_010925285.1", "2107", "g4526", "i0", "80", "1.22950819672131", "75", "0", "98.4", "1", "181", "2", "113", "187", "WP_010925285.1 lysylphosphatidylglycerol synthase transmembrane domain-containing protein [Mycoplasmopsis pulmonis]", "diamond", "225", "110", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [30106095, "PRJNA322517_P_NODE_3652_length_210_cov_3.285714_g3630_i0", "PRJNA322517", "3652", "210", "3.285714", "6.8999994", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "56.2", "4.29e-7", "", "NR", "WP_010924929.1", "2107", "g3630", "i0", "61.4", "1", "70", "24", "100", "1", "1", "210", "205", "271", "WP_010924929.1 hypothetical protein [Mycoplasmopsis pulmonis]", "diamond", "210", "56.2", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [30169204, "PRJNA322517_P_NODE_5012_length_174_cov_1.224000_g4990_i0", "PRJNA322517", "5012", "174", "1.224", "2.12976", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "99", "2.29e-22", "", "NR", "WP_010925112.1", "2107", "g4990", "i0", "87.7", "0.982758620689655", "57", "7", "98.3", "0", "172", "2", "499", "555", "WP_010925112.1 lipoprotein 17-related variable surface protein [Mycoplasmopsis pulmonis]", "diamond", "171", "99", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [30296208, "PRJNA322517_P_NODE_3352_length_227_cov_3.224719_g3330_i0", "PRJNA322517", "3352", "227", "3.224719", "7.32011213", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "119", "1.89e-32", "", "NR", "WP_010924954.1", "2107", "g3330", "i0", "100", "0.898678414096916", "68", "0", "89.9", "0", "22", "225", "54", "121", "WP_010924954.1 hypothetical protein [Mycoplasmopsis pulmonis]", "diamond", "204", "119", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [30643147, "PRJNA322517_P_NODE_3753_length_207_cov_3.075949_g3731_i0", "PRJNA322517", "3753", "207", "3.075949", "6.36721443", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "114", "1.01e-28", "", "NR", "WP_010925006.1", "2107", "g3731", "i0", "100", "0.898550724637681", "62", "0", "89.9", "0", "187", "2", "36", "97", "WP_010925006.1 YihY/virulence factor BrkB family protein [Mycoplasmopsis pulmonis]", "diamond", "186", "114", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [30927821, "PRJNA322517_P_NODE_4214_length_191_cov_3.309859_g4192_i0", "PRJNA322517", "4214", "191", "3.309859", "6.32183069", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "61.6", "1.23e-9", "", "NR", "WP_143756252.1", "2107", "g4192", "i0", "96.9", "1.00523560209424", "32", "1", "50.3", "0", "95", "190", "150", "181", "WP_143756252.1 hypothetical protein [Mycoplasmopsis pulmonis]", "diamond", "192", "61.6", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [31211576, "PRJNA322517_P_NODE_6395_length_158_cov_2.798165_g6373_i0", "PRJNA322517", "6395", "158", "2.798165", "4.4211007", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "96.3", "4.63e-24", "", "NR", "CAC13484.1", "2107", "g6373", "i0", "94.2", "0.987341772151899", "52", "3", "98.7", "0", "157", "2", "2", "53", "CAC13484.1 unknown; predicted coding region [Mycoplasmopsis pulmonis]", "diamond", "156", "96.3", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [31528444, "PRJNA322517_P_NODE_3956_length_199_cov_4.346667_g3934_i0", "PRJNA322517", "3956", "199", "4.346667", "8.64986733", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "67.8", "2.99e-11", "", "NR", "WP_010925249.1", "2107", "g3934", "i0", "100", "0.482412060301508", "32", "0", "48.2", "0", "98", "3", "721", "752", "WP_010925249.1 hypothetical protein [Mycoplasmopsis pulmonis]", "diamond", "96", "67.8", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [31654673, "PRJNA322517_P_NODE_5157_length_171_cov_1.401639_g5135_i0", "PRJNA322517", "5157", "171", "1.401639", "2.39680269", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "94", "6.929999999999999e-23", "", "NR", "WP_010925084.1", "2107", "g5135", "i0", "94.6", "0.982456140350877", "56", "3", "98.2", "0", "169", "2", "50", "105", "WP_010925084.1 hypothetical protein [Mycoplasmopsis pulmonis]", "diamond", "168", "94", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [31781202, "PRJNA322517_P_NODE_1197_length_457_cov_6.928922_g1175_i0", "PRJNA322517", "1197", "457", "6.928922", "31.66517354", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "272", "1.83e-81", "", "NR", "WP_322536577.1", "2107", "g1175", "i0", "97.9", "0.925601750547046", "141", "3", "92.6", "0", "34", "456", "505", "645", "WP_322536577.1 hypothetical protein [Mycoplasmopsis pulmonis]", "diamond", "423", "272", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [31844491, "PRJNA322517_P_NODE_797_length_598_cov_11.679417_g775_i0", "PRJNA322517", "797", "598", "11.679417", "69.84291366", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "328", "8.249999999999999e-101", "", "NR", "WP_322536577.1", "2107", "g775", "i0", "87.4", "0.993311036789298", "198", "25", "99.3", "0", "596", "3", "296", "493", "WP_322536577.1 hypothetical protein [Mycoplasmopsis pulmonis]", "diamond", "594", "328", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [32129576, "PRJNA322517_P_NODE_4098_length_195_cov_3.404110_g4076_i0", "PRJNA322517", "4098", "195", "3.40411", "6.6380145", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "125", "1.4499999999999998e-31", "", "NR", "WP_322536748.1", "2107", "g4076", "i0", "100", "0.984615384615385", "64", "0", "98.5", "0", "193", "2", "114", "177", "WP_322536748.1 hypothetical protein [Mycoplasmopsis pulmonis]", "diamond", "192", "125", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [32224392, "PRJNA322517_P_NODE_5798_length_164_cov_1.921739_g5776_i0", "PRJNA322517", "5798", "164", "1.921739", "3.15165196", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "73.2", "2.35e-13", "", "NR", "WP_010925505.1", "2107", "g5776", "i0", "100", "0.823170731707317", "45", "0", "82.3", "0", "2", "136", "567", "611", "WP_010925505.1 ribonuclease J [Mycoplasmopsis pulmonis]", "diamond", "135", "73.2", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"], [32319547, "PRJNA322517_P_NODE_2679_length_281_cov_3.918103_g2657_i0", "PRJNA322517", "2679", "281", "3.918103", "11.00986943", "Mycoplasmopsis pulmonis", "2107", "Bacteria", "Bacteria", "154", "2.81e-41", "", "NR", "WP_322536577.1", "2107", "g2657", "i0", "87.1", "0.99288256227758", "93", "12", "99.3", "0", "3", "281", "156", "248", "WP_322536577.1 hypothetical protein [Mycoplasmopsis pulmonis]", "diamond", "279", "154", "1", "Bacteria", null, "Bacillati", "Mycoplasmatota", null, "Mycoplasmoidales", "Metamycoplasmataceae", "Mycoplasmopsis", "Mycoplasmopsis pulmonis"]], "truncated": false, "filtered_table_rows_count": 21, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA322517", "p2": "Mycoplasmatota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA322517&tax_phylum=Mycoplasmatota", "results": [{"value": "PRJNA322517", "label": "PRJNA322517", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Mycoplasmatota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA322517&tax_phylum=Mycoplasmatota", "results": [{"value": "diamond", "label": "diamond", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA322517&tax_phylum=Mycoplasmatota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA322517&tax_phylum=Mycoplasmatota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA322517&tax_phylum=Mycoplasmatota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA322517&tax_phylum=Mycoplasmatota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA322517&tax_phylum=Mycoplasmatota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA322517&tax_phylum=Mycoplasmatota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA322517&tax_phylum=Mycoplasmatota", "results": [{"value": "Mycoplasmatota", "label": "Mycoplasmatota", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA322517", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 210.80422300292412}