{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA306153\" and tax_superkingdom = \"Bacteria\"", "rows": [[20777885, "PRJNA306153_S_NODE_137_length_532_cov_6.689861_g127_i0", "PRJNA306153", "137", "532", "6.689861", "35.59006052", "Flavobacteriia bacterium", "2044941", "Bacteria", "Bacteria", "210", "3.0500000000000005e-64", "", "NR", "NBO60432.1", "2044941", "g127", "i0", "63.9", "1.90601503759399", "169", "57", "94.7", "3", "531", "28", "154", "319", "NBO60432.1 hypothetical protein [Flavobacteriia bacterium]", "diamond", "1014", "210", "1", "Bacteria", "FCB group", "Pseudomonadati", "Bacteroidota", "Flavobacteriia", null, null, null, "Flavobacteriia bacterium"], [26884559, "PRJNA306153_S_NODE_141_length_524_cov_12.321212_g131_i0", "PRJNA306153", "141", "524", "12.321212", "64.56315088", "Phocaeicola vulgatus", "821", "Bacteria", "Bacteria", "125", "1.19e-33", "", "NR", "WP_050229787.1", 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"1", "24", "179", "53", "106", "KTC97694.1 hypothetical protein Lery_1533 [Legionella erythra]", "diamond", "162", "44.3", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Legionellales", "Legionellaceae", "Legionella", "Legionella erythra"], [28527192, "PRJNA306153_S_NODE_1827_length_183_cov_3.006494_g1814_i0", "PRJNA306153", "1827", "183", "3.006494", "5.50188402", "Acinetobacter baumannii", "470", "Bacteria", "Bacteria", "56.2", "1.09e-8", "", "NR", "OLU92949.1", "470", "g1814", "i0", "57.4", "0.770491803278688", "47", "20", "77", "0", "153", "13", "2", "48", "OLU92949.1 hypothetical protein AWU46_0217185 [Acinetobacter baumannii]", "diamond", "141", "56.2", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Moraxellales", "Moraxellaceae", "Acinetobacter", "Acinetobacter baumannii"], [28796928, "PRJNA306153_S_NODE_947_length_246_cov_4.649770_g934_i0", "PRJNA306153", "947", "246", "4.64977", "11.4384342", "Burkholderia", "32008", "Bacteria", "Bacteria", "79.7", "3.9e-17", "", "NR", "KOT11876.1", "13373", "g934", "i0", "56.7", "2.90243902439024", "60", "26", "73.2", "0", "183", "4", "1", "60", "KOT11876.1 putative serine acetyltransferase [Burkholderia mallei]", "diamond", "714", "80.1", "0.995006242197254", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Betaproteobacteria", "Burkholderiales", "Burkholderiaceae", "Burkholderia", "Burkholderia mallei"], [28937526, "PRJNA306153_S_NODE_2188_length_169_cov_1.871429_g2175_i0", "PRJNA306153", "2188", "169", "1.871429", "3.16271501", "Pseudomonadota bacterium", "1977087", "Bacteria", "Bacteria", "62.4", "2.81e-10", "", "NR", "MEM8936747.1", "1977087", "g2175", "i0", "64.1", "0.692307692307692", "39", "14", "69.2", "0", "3", "119", "127", "165", "MEM8936747.1 hypothetical protein [Pseudomonadota bacterium]", "diamond", "117", "62.4", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", null, null, null, null, "Pseudomonadota 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"Gammaproteobacteria", "Moraxellales", "Moraxellaceae", "Acinetobacter", "Acinetobacter baumannii"], [29997189, "PRJNA306153_S_NODE_1671_length_190_cov_2.223602_g1658_i0", "PRJNA306153", "1671", "190", "2.223602", "4.2248438", "root", "1", "Root_unresolved", "Root_unresolved", "42.4", "0.0259", "", "NR", "MCL2207105.1", "2604144", "g1658", "i0", "33.3", "1.64210526315789", "60", "40", "94.7", "0", "10", "189", "288", "347", "MCL2207105.1 methyl-accepting chemotaxis protein [Candidatus Fibrimonadales bacterium]", "diamond", "312", "42.7", "0.992974238875878", "Bacteria", "FCB group", "Pseudomonadati", "Fibrobacterota", "Fibrobacteria", "Candidatus Fibrimonadales", null, null, "Candidatus Fibrimonadales bacterium"], [30642794, "PRJNA306153_S_NODE_1913_length_179_cov_4.826667_g1900_i0", "PRJNA306153", "1913", "179", "4.826667", "8.63973393", "Dehalococcoidales bacterium", "2026733", "Bacteria", "Bacteria", "86.3", "9.13e-20", "", "NR", "MDO9333994.1", "2026733", "g1900", "i0", "91.8", "0.82122905027933", "49", "3", "80.4", "1", "2", "145", "87", "135", "MDO9333994.1 30S ribosomal protein S4 [Dehalococcoidales bacterium]", "diamond", "147", "86.3", "1", "Bacteria", null, "Bacillati", "Chloroflexota", "Dehalococcoidia", "Dehalococcoidales", null, null, "Dehalococcoidales bacterium"], [31274904, "PRJNA306153_S_NODE_1895_length_180_cov_1.966887_g1882_i0", "PRJNA306153", "1895", "180", "1.966887", "3.5403966", "Novosphingobium sp.", "1874826", "Bacteria", "Bacteria", "43.1", "0.0114", "", "NR", "MFM5917133.1", "1874826", "g1882", "i0", "43.2", "0.733333333333333", "44", "25", "73.3", "0", "5", "136", "12", "55", "MFM5917133.1 DNA topoisomerase IB [Novosphingobium sp.]", "diamond", "132", "43.1", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Alphaproteobacteria", "Sphingomonadales", "Sphingomonadaceae", "Novosphingobium", "Novosphingobium sp."]], "truncated": false, "filtered_table_rows_count": 15, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_superkingdom\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA306153", "p2": "Bacteria"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria", "results": [{"value": "PRJNA306153", "label": "PRJNA306153", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_superkingdom=Bacteria", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria", "results": [{"value": "diamond", "label": "diamond", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA306153&tax_superkingdom=Bacteria", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153", "selected": true}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria", "results": [{"value": "FCB group", "label": "FCB group", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria&tax_clade=FCB+group", "selected": false}, {"value": "Bacteria candidate phyla", "label": "Bacteria candidate phyla", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria&tax_clade=Bacteria+candidate+phyla", "selected": false}, {"value": "PVC group", "label": "PVC group", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria&tax_clade=PVC+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 12, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria&tax_kingdom=Pseudomonadati", "selected": false}, {"value": "Bacillati", "label": "Bacillati", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria", "results": [{"value": "Pseudomonadota", "label": "Pseudomonadota", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria&tax_phylum=Pseudomonadota", "selected": false}, {"value": "Bacteroidota", "label": "Bacteroidota", "count": 2, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria&tax_phylum=Bacteroidota", "selected": false}, {"value": "Bacillota", "label": "Bacillota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria&tax_phylum=Bacillota", "selected": false}, {"value": "Candidatus Komeiliibacteriota", "label": "Candidatus Komeiliibacteriota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria&tax_phylum=Candidatus+Komeiliibacteriota", "selected": false}, {"value": "Chloroflexota", "label": "Chloroflexota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria&tax_phylum=Chloroflexota", "selected": false}, {"value": "Fibrobacterota", "label": "Fibrobacterota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria&tax_phylum=Fibrobacterota", "selected": false}, {"value": "Gemmatimonadota", "label": "Gemmatimonadota", "count": 1, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA306153&tax_superkingdom=Bacteria&tax_phylum=Gemmatimonadota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 393.97957699839026}