{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA289590\" and tax_phylum = \"Actinomycetota\"", "rows": [[26599026, "PRJNA289590_P_NODE_30041_length_164_cov_0.878261_g29817_i0", "PRJNA289590", "30041", "164", "0.878261", "1.44034804", "Pseudokineococcus marinus", "351215", "Bacteria", "Bacteria", "92", "4.67e-20", "", "NR", "WP_171203999.1", "351215", "g29817", "i0", "81.5", "0.98780487804878", "54", "10", "98.8", "0", "163", "2", "339", "392", "WP_171203999.1 catalase [Pseudokineococcus marinus]", "diamond", "162", "92", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kineosporiales", "Kineosporiaceae", "Pseudokineococcus", "Pseudokineococcus marinus"], [26965193, "PRJNA289590_P_NODE_23262_length_182_cov_1.556391_g23038_i0", "PRJNA289590", "23262", "182", "1.556391", "2.83263162", "Actinomycetota", "201174", "Bacteria", "Bacteria", "65.9", "1.16e-10", "", "NR", "MEA2314811.1", "2586742", "g23038", "i0", "59.7", "3.04945054945055", "62", "23", "98.9", "2", "3", "182", "504", "565", "MEA2314811.1 hypothetical protein [Solirubrobacteraceae bacterium]", "diamond", "555", "65.9", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Thermoleophilia", "Solirubrobacterales", "Solirubrobacteraceae", null, "Solirubrobacteraceae bacterium"], [27028557, "PRJNA289590_P_NODE_14542_length_237_cov_1.648936_g14318_i0", "PRJNA289590", "14542", "237", "1.648936", "3.90797832", "Actinomycetes", "1760", "Bacteria", "Bacteria", "95.1", "1.28e-20", "", "NR", "WP_073893777.1", "2071", "g14318", "i0", "66.2", "6.59493670886076", "74", "25", "93.7", "0", "15", "236", "5597", "5670", "WP_073893777.1 MULTISPECIES: non-ribosomal peptide synthetase [Saccharothrix]", "diamond", "1563", "95.1", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Pseudonocardiales", "Pseudonocardiaceae", "Saccharothrix", null], [27453592, "PRJNA289590_P_NODE_13243_length_250_cov_2.069652_g13019_i0", "PRJNA289590", "13243", "250", "2.069652", "5.17413", "Mycolicibacterium sp.", "2320850", "Bacteria", "Bacteria", "119", "6.45e-29", "", "NR", "WP_372943725.1", "2320850", "g13019", "i0", "71.1", "1.992", "83", "24", "99.6", "0", "250", "2", "217", "299", "WP_372943725.1 phage tail tape measure protein [Mycolicibacterium sp.]", "diamond", "498", "119", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Mycobacteriaceae", "Mycolicibacterium", "Mycolicibacterium sp."], [28179350, "PRJNA289590_P_NODE_27566_length_167_cov_0.881356_g27342_i0", "PRJNA289590", "27566", "167", "0.881356", "1.47186452", "Actinomycetota bacterium", "2900548", "Bacteria", "Bacteria", "44.7", "0.00278", "", "NR", "MDQ1601302.1", "2900548", "g27342", "i0", "42.6", "1.68862275449102", "47", "26", "82.6", "1", "24", "161", "165", "211", "MDQ1601302.1 hypothetical protein [Actinomycetota bacterium]", "diamond", "282", "44.7", "1", "Bacteria", null, "Bacillati", "Actinomycetota", null, null, null, null, "Actinomycetota bacterium"], [28228528, "PRJNA289590_P_NODE_15126_length_232_cov_1.590164_g14902_i0", "PRJNA289590", "15126", "232", "1.590164", "3.68918048", "Bacteria", "2", "Bacteria", "Bacteria", "114", "1.14e-29", "", "NR", "MES9394400.1", "1747", "g14902", "i0", "73.7", "8.8448275862069", "76", "20", "98.3", "0", "230", "3", "57", "132", "MES9394400.1 arginine--tRNA ligase [Cutibacterium acnes]", "diamond", "2052", "115", "0.991304347826087", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Propionibacteriaceae", "Cutibacterium", "Cutibacterium acnes"], [28368956, "PRJNA289590_P_NODE_29266_length_165_cov_0.896552_g29042_i0", "PRJNA289590", "29266", "165", "0.896552", "1.4793108", "Actinomycetes bacterium", "1883427", "Bacteria", "Bacteria", "108", "1.14e-25", "", "NR", "MCG9477778.1", "1883427", "g29042", "i0", "98.1", "0.963636363636364", "53", "1", "96.4", "0", "6", "164", "579", "631", "MCG9477778.1 phosphoribosylformylglycinamidine synthase subunit PurL [Actinomycetes bacterium]", "diamond", "159", "108", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", null, null, null, "Actinomycetes bacterium"], [28621759, "PRJNA289590_P_NODE_24147_length_177_cov_2.437500_g23923_i0", "PRJNA289590", "24147", "177", "2.4375", "4.314375", "Catellatospora sp. NPDC", "54104", "Bacteria", "Bacteria", "65.9", "8.71e-11", "", "NR", "WP_360541395.1", "3155271", "g23923", "i0", "66.7", "0.813559322033898", "48", "16", "81.4", "0", "30", "173", "85", "132", "WP_360541395.1 hypothetical protein [Catellatospora sp. NPDC049111]", "diamond", "144", "65.9", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micromonosporales", "Micromonosporaceae", "Catellatospora", "Catellatospora sp. NPDC049111"], [28653250, "PRJNA289590_P_NODE_1587_length_1019_cov_14.557732_g1404_i0", "PRJNA289590", "1587", "1019", "14.557732", "148.34328908", "Nonomuraea angiospora", "46172", "Bacteria", "Bacteria", "45.4", "0.0151", "", "NR", "WP_319716170.1", "46172", "g1404", "i0", "52.3", "0.129538763493621", "44", "21", "13", "0", "767", "636", "9", "52", "WP_319716170.1 hypothetical protein, partial [Nonomuraea angiospora]", "diamond", "132", "45.4", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Streptosporangiales", "Streptosporangiaceae", "Nonomuraea", "Nonomuraea angiospora"], [29252864, "PRJNA289590_P_NODE_27369_length_167_cov_0.881356_g27145_i0", "PRJNA289590", "27369", "167", "0.881356", "1.47186452", "Geodermatophilaceae bacterium", "1882271", "Bacteria", "Bacteria", "41.2", "0.0475", "", "NR", "MBA3419366.1", "1882271", "g27145", "i0", "44.4", "0.808383233532934", "45", "25", "80.8", "0", "30", "164", "586", "630", "MBA3419366.1 hypothetical protein [Geodermatophilaceae bacterium]", "diamond", "135", "41.2", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Geodermatophilales", "Geodermatophilaceae", null, "Geodermatophilaceae bacterium"], [30390561, "PRJNA289590_P_NODE_31353_length_162_cov_0.920354_g31129_i0", "PRJNA289590", "31353", "162", "0.920354", "1.49097348", "Nocardioides sp. CN2-186", "3156607", "Bacteria", "Bacteria", "89.7", "3.17e-19", "", "NR", "WP_348870305.1", "3156607", "g31129", "i0", "86.8", "0.981481481481482", "53", "7", "98.1", "0", "161", "3", "100", "152", "WP_348870305.1 class I adenylate-forming enzyme family protein [Nocardioides sp. CN2-186]", "diamond", "159", "89.7", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Propionibacteriales", "Nocardioidaceae", "Nocardioides", "Nocardioides tweenelious"], [30895804, "PRJNA289590_P_NODE_19054_length_205_cov_1.000000_g18830_i0", "PRJNA289590", "19054", "205", "1", "2.05", "Actinomycetota bacterium", "2900548", "Bacteria", "Bacteria", "42", "0.0427", "", "NR", "TML42851.1", "2900548", "g18830", "i0", "56.4", "0.570731707317073", "39", "11", "55.6", "2", "89", "202", "30", "63", "TML42851.1 MAG: ABC transporter ATP-binding protein [Actinomycetota bacterium]", "diamond", "117", "42", "1", "Bacteria", null, "Bacillati", "Actinomycetota", null, null, null, null, "Actinomycetota bacterium"], [30990580, "PRJNA289590_P_NODE_1594_length_1015_cov_14.966874_g1411_i0", "PRJNA289590", "1594", "1015", "14.966874", "151.9137711", "Nonomuraea angiospora", "46172", "Bacteria", "Bacteria", "45.4", "0.015", "", "NR", "WP_319716170.1", "46172", "g1411", "i0", "52.3", "0.130049261083744", "44", "21", "13", "0", "763", "632", "9", "52", "WP_319716170.1 hypothetical protein, partial [Nonomuraea angiospora]", "diamond", "132", "45.4", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Streptosporangiales", "Streptosporangiaceae", "Nonomuraea", "Nonomuraea angiospora"], [31022061, "PRJNA289590_P_NODE_19715_length_201_cov_1.269737_g19491_i0", "PRJNA289590", "19715", "201", "1.269737", "2.55217137", "Streptomyces pactum", "68249", "Bacteria", "Bacteria", "62.4", "1.23e-9", "", "NR", "WP_197987272.1", "68249", "g19491", "i0", "54.5", "0.82089552238806", "55", "25", "82.1", "0", "200", "36", "183", "237", "WP_197987272.1 flavin reductase family protein [Streptomyces pactum]", "diamond", "165", "62.4", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces pactum"], [32319119, "PRJNA289590_P_NODE_10199_length_289_cov_2.062500_g9975_i0", "PRJNA289590", "10199", "289", "2.0625", "5.960625", "Streptomyces sp. NPDC", "1931", "Bacteria", "Bacteria", "84", "2.23e-16", "", "NR", "WP_400070639.1", "3365701", "g9975", "i0", "48.4", "0.986159169550173", "95", "48", "97.6", "1", "283", "2", "1589", "1683", "WP_400070639.1 amino acid adenylation domain-containing protein [Streptomyces sp. NPDC053427]", "diamond", "285", "84", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces sp. NPDC053427"], [32445614, "PRJNA289590_P_NODE_26179_length_169_cov_0.866667_g25955_i0", "PRJNA289590", "26179", "169", "0.866667", "1.46466723", "Mycolicibacterium arenosum", "2952157", "Bacteria", "Bacteria", "75.5", "5.18e-16", "", "NR", "WP_255062745.1", "2952157", "g25955", "i0", "81.4", "0.763313609467456", "43", "8", "76.3", "0", "130", "2", "20", "62", "WP_255062745.1 hypothetical protein [Mycolicibacterium arenosum]", "diamond", "129", "75.5", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Mycobacteriaceae", "Mycolicibacterium", "Mycolicibacterium arenosum"], [32697706, "PRJNA289590_P_NODE_11580_length_270_cov_0.941176_g11356_i0", "PRJNA289590", "11580", "270", "0.941176", "2.5411752", "Actinomycetota bacterium", "2900548", "Bacteria", "Bacteria", "43.1", "0.0352", "", "NR", "MDP9461866.1", "2900548", "g11356", "i0", "35.8", "0.744444444444444", "67", "43", "74.4", "0", "21", "221", "78", "144", "MDP9461866.1 DUF4192 domain-containing protein [Actinomycetota bacterium]", "diamond", "201", "43.1", "1", "Bacteria", null, "Bacillati", "Actinomycetota", null, null, null, null, "Actinomycetota bacterium"], [32841248, "PRJNA289590_P_NODE_12540_length_258_cov_1.937799_g12316_i0", "PRJNA289590", "12540", "258", "1.937799", "4.99952142", "Bacteria", "2", "Bacteria", "Bacteria", "77", "6.52e-16", "", "NR", "WP_027004908.1", "191495", "g12316", "i0", "55.4", "3.59302325581395", "74", "33", "86", "0", "32", "253", "44", "117", "WP_027004908.1 holo-ACP synthase [Conexibacter woesei]", "diamond", "927", "77", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Thermoleophilia", "Solirubrobacterales", "Conexibacteraceae", "Conexibacter", "Conexibacter woesei"]], "truncated": false, "filtered_table_rows_count": 18, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA289590", "p2": "Actinomycetota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA289590&tax_phylum=Actinomycetota", "results": [{"value": "PRJNA289590", "label": "PRJNA289590", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA289590&tax_phylum=Actinomycetota", "results": [{"value": "diamond", "label": "diamond", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA289590&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA289590&tax_phylum=Actinomycetota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA289590&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA289590&tax_phylum=Actinomycetota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA289590&tax_phylum=Actinomycetota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA289590&tax_phylum=Actinomycetota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA289590&tax_phylum=Actinomycetota", "results": [{"value": "Actinomycetota", "label": "Actinomycetota", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA289590", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 223.65159800392576}