{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA278119\" and tax_phylum = \"Campylobacterota\"", "rows": [[27326988, "PRJNA278119_P_NODE_12323_length_324_cov_3.141818_g12075_i0", "PRJNA278119", "12323", "324", "3.1418180000000002", "10.17949032", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "57.8", "1.83e-8", "", "NR", "GAA6953508.1", "210", "g12075", "i0", "75", "0.296296296296296", "32", "8", "29.6", "0", "265", "170", "1", "32", "GAA6953508.1 hypothetical protein Kyoto211A_0720 [Helicobacter pylori]", "diamond", "96", "57.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [31243076, "PRJNA278119_P_NODE_24395_length_200_cov_1.225166_g24146_i0", "PRJNA278119", "24395", "200", "1.225166", "2.450332", "Campylobacter sp.", "205", "Bacteria", "Bacteria", "39.7", "0.0312", "", "NR", "WP_407932432.1", "205", "g24146", "i0", "64", "0.375", "25", "9", "37.5", "0", "195", "121", "1", "25", "WP_407932432.1 BspA family leucine-rich repeat surface protein, partial [Campylobacter sp.]", "diamond", "75", "39.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Campylobacteraceae", "Campylobacter", "Campylobacter sp."], [32886492, "PRJNA278119_P_NODE_28680_length_185_cov_1.147059_g28431_i0", "PRJNA278119", "28680", "185", "1.147059", "2.12205915", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "44.7", "2.57e-4", "", "NR", "GAA8766134.1", "210", "g28431", "i0", "90.5", "0.340540540540541", "21", "2", "34.1", "0", "108", "170", "1", "21", "GAA8766134.1 hypothetical protein Kyoto147A_4290 [Helicobacter pylori]", "diamond", "63", "44.7", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"]], "truncated": false, "filtered_table_rows_count": 3, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA278119", "p2": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA278119&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA278119", "label": "PRJNA278119", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA278119&tax_phylum=Campylobacterota", "results": [{"value": "diamond", "label": "diamond", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA278119&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA278119&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA278119&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA278119&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA278119&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA278119&tax_phylum=Campylobacterota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA278119&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA278119", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 370.0044009965495}