{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA195897\" and tax_phylum = \"Bacillota\"", "rows": [[10570066, "PRJNA195897_P_NODE_5009_length_215_cov_1.566265_g4976_i0", "PRJNA195897", "5009", "215", "1.566265", "3.36746975", "Bacillus sp. 1P1", "3132265", "Bacteria", "Bacteria", "63.9", "3.69e-10", "", "NR", "WP_413303918.1", "3132265", "g4976", "i0", "41.4", "0.976744186046512", "70", "38", "97.7", "1", "214", "5", "46", "112", "WP_413303918.1 SDR family oxidoreductase [Bacillus sp. 1P10SD]", "diamond", "210", "63.9", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Bacillus", "Bacillus sp. 1P10SD"], [27136733, "PRJNA195897_P_NODE_722_length_639_cov_2.555932_g692_i0", "PRJNA195897", "722", "639", "2.555932", "16.33240548", "Pontibacillus sp. 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null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Clostridiaceae", "Clostridium", "Clostridium tetani"], [28463708, "PRJNA195897_P_NODE_7306_length_185_cov_0.845588_g7273_i0", "PRJNA195897", "7306", "185", "0.845588", "1.5643378", "Alicyclobacillus kakegawensis", "392012", "Bacteria", "Bacteria", "96.3", "1.68e-21", "", "NR", "WP_067932131.1", "392012", "g7273", "i0", "60.7", "1.97837837837838", "61", "24", "98.9", "0", "183", "1", "313", "373", "WP_067932131.1 glycoside hydrolase family 30 protein [Alicyclobacillus kakegawensis]", "diamond", "366", "96.3", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Alicyclobacillaceae", "Alicyclobacillus", "Alicyclobacillus kakegawensis"], [29333839, "PRJNA195897_P_NODE_2029_length_359_cov_1.845161_g1996_i0", "PRJNA195897", "2029", "359", "1.845161", "6.62412799", "root", "1", "Root_unresolved", "Root_unresolved", "97.4", "4.1699999999999996e-24", "", "NR", "WP_369599335.1", "1590", "g1996", "i0", "91.3", "85.6963788300836", "46", "4", "38.4", "0", "357", "220", "14", "59", "WP_369599335.1 hypothetical protein, partial [Lactiplantibacillus plantarum]", "diamond", "30765", "97.8", "0.995910020449898", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Lactobacillaceae", "Lactiplantibacillus", "Lactiplantibacillus plantarum"], [29523266, "PRJNA195897_P_NODE_2530_length_315_cov_1.770677_g2497_i0", "PRJNA195897", "2530", "315", "1.770677", "5.57763255", "Acetivibrio", "35829", "Bacteria", "Bacteria", "53.9", "1.07e-5", "", "NR", "WP_038290891.1", "253314", "g2497", "i0", "31.8", "1.67619047619048", "88", "57", "83.8", "1", "11", "274", "1705", "1789", "WP_038290891.1 S8 family serine peptidase [Acetivibrio straminisolvens]", "diamond", "528", "53.9", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Oscillospiraceae", "Acetivibrio", "Acetivibrio straminisolvens"], [29820980, "PRJNA195897_P_NODE_1471_length_435_cov_1.305699_g1438_i0", "PRJNA195897", "1471", "435", "1.305699", "5.67979065", "Bacillus thuringiensis", "1428", "Bacteria", "Bacteria", "42.7", "0.03", "", "NR", "MRA76181.1", "1428", "g1438", "i0", "40.4", "0.358620689655172", "52", "31", "35.9", "0", "193", "348", "20", "71", "MRA76181.1 hypothetical protein [Bacillus thuringiensis]", "diamond", "156", "42.7", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Bacillus", "Bacillus thuringiensis"], [30136757, "PRJNA195897_P_NODE_5892_length_201_cov_1.546053_g5859_i0", "PRJNA195897", "5892", "201", "1.546053", "3.10756653", "Ruminococcus sp.", "41978", "Bacteria", "Bacteria", "67", "2.78e-11", "", "NR", "MBQ6180627.1", "41978", "g5859", "i0", "55.2", "12.5970149253731", "58", "25", "86.6", "1", "178", "5", "4", "60", "MBQ6180627.1 methyltransferase domain-containing protein [Ruminococcus sp.]", "diamond", "2532", "67", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Oscillospiraceae", "Ruminococcus", "Ruminococcus sp."], [30534010, "PRJNA195897_P_NODE_3413_length_263_cov_1.700935_g3380_i0", "PRJNA195897", "3413", "263", "1.700935", "4.47345905", "Paenibacillaceae", "186822", "Bacteria", "Bacteria", "110", "4.17e-29", "", "NR", "WP_204516782.1", "1125967", "g3380", "i0", "68.5", "4.17490494296578", "73", "23", "83.3", "0", "223", "5", "2", "74", "WP_204516782.1 group I truncated hemoglobin [Brevibacillus fulvus]", "diamond", "1098", "111", "0.990990990990991", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Paenibacillaceae", "Brevibacillus", "Brevibacillus fulvus"], [30691976, "PRJNA195897_P_NODE_12733_length_160_cov_2.342342_g12700_i0", "PRJNA195897", "12733", "160", "2.342342", "3.7477472", "Bacteria", "2", "Bacteria", "Bacteria", "74.7", "6.16e-14", "", "NR", "MDR3288635.1", "2052179", "g12700", "i0", "65.4", "3.80625", "52", "18", "97.5", "0", "3", "158", "242", "293", "MDR3288635.1 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase [Peptococcaceae bacterium]", "diamond", "609", "75.1", "0.994673768308922", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Peptococcaceae", null, "Peptococcaceae bacterium"], [30913368, "PRJNA195897_P_NODE_3834_length_246_cov_1.319797_g3801_i0", "PRJNA195897", "3834", "246", "1.319797", "3.24670062", "root", "1", "Root_unresolved", "Root_unresolved", "62.4", "7.14e-11", "", "NR", "WP_369599335.1", "1590", "g3801", "i0", "100", "75.890243902439", "27", "0", "32.9", "0", "6", "86", "33", "59", "WP_369599335.1 hypothetical protein, partial [Lactiplantibacillus plantarum]", "diamond", "18669", "62.4", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Lactobacillaceae", "Lactiplantibacillus", "Lactiplantibacillus plantarum"], [30913369, "PRJNA195897_P_NODE_4034_length_238_cov_3.137566_g4001_i0", "PRJNA195897", "4034", "238", "3.137566", "7.46740708", "root", "1", "Root_unresolved", "Root_unresolved", "61.6", "3.73e-9", "", "NR", "WP_016820924.1", "44249", "g4001", "i0", "61.1", "5.38235294117647", "54", "20", "68.1", "1", "52", "213", "1", "53", "WP_016820924.1 MULTISPECIES: SDR family oxidoreductase [Paenibacillus]", "diamond", "1281", "62", "0.993548387096774", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Paenibacillaceae", "Paenibacillus", null], [30927230, "PRJNA195897_P_NODE_3414_length_263_cov_1.696262_g3381_i0", "PRJNA195897", "3414", "263", "1.696262", "4.46116906", "Solobacterium sp.", "2060878", "Bacteria", "Bacteria", "66.2", "2.53e-10", "", "NR", "MBR3364292.1", "2060878", "g3381", "i0", "48.5", "1.50570342205323", "66", "34", "75.3", "0", "202", "5", "204", "269", "MBR3364292.1 family 16 glycosylhydrolase [Solobacterium sp.]", "diamond", "396", "66.2", "1", "Bacteria", null, "Bacillati", "Bacillota", "Erysipelotrichia", "Erysipelotrichales", "Erysipelotrichaceae", "Solobacterium", "Solobacterium sp."], [31323978, "PRJNA195897_P_NODE_11675_length_164_cov_0.904348_g11642_i0", "PRJNA195897", "11675", "164", "0.904348", "1.48313072", "Bacteria", "2", "Bacteria", "Bacteria", "80.5", "6.26e-16", "", "NR", "NMC31602.1", "2049049", "g11642", "i0", "70.8", "4.40853658536585", "48", "14", "87.8", "0", "145", "2", "572", "619", "NMC31602.1 transketolase [Veillonellaceae bacterium]", "diamond", "723", "80.5", "1", "Bacteria", null, "Bacillati", "Bacillota", "Negativicutes", "Veillonellales", "Veillonellaceae", null, "Veillonellaceae bacterium"], [31355847, "PRJNA195897_P_NODE_9316_length_168_cov_1.882353_g9283_i0", "PRJNA195897", "9316", "168", "1.882353", "3.16235304", "root", "1", "Root_unresolved", "Root_unresolved", "61.6", "1.32e-10", "", "NR", "MRC56834.1", "1428", "g9283", "i0", "56.6", "2.91071428571429", "53", "23", "94.6", "0", "9", "167", "18", "70", "MRC56834.1 hypothetical protein [Bacillus thuringiensis]", "diamond", "489", "61.6", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Bacillus", "Bacillus thuringiensis"], [31735103, "PRJNA195897_P_NODE_11737_length_163_cov_1.807018_g11704_i0", "PRJNA195897", "11737", "163", "1.807018", "2.94543934", "root", "1", "Root_unresolved", "Root_unresolved", "55.8", "6.6e-8", "", "NR", "WP_229295436.1", "1311", "g11704", "i0", "62", "16.6932515337423", "50", "17", "88.3", "2", "144", "1", "6", "55", "WP_229295436.1 ubiquitin-like protein, partial [Streptococcus agalactiae]", "diamond", "2721", "55.8", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Streptococcaceae", "Streptococcus", "Streptococcus agalactiae"], [31829939, "PRJNA195897_P_NODE_3157_length_276_cov_1.475771_g3124_i0", "PRJNA195897", "3157", "276", "1.475771", "4.07312796", "Bacteria", "2", "Bacteria", "Bacteria", "88.2", "3.32e-20", "", "NR", "WP_229725710.1", "373054", "g3124", "i0", "45.5", "4.77173913043478", "88", "48", "95.7", "0", "11", "274", "5", "92", "WP_229725710.1 group I truncated hemoglobin [Calditerricola satsumensis]", "diamond", "1317", "88.2", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Calditerricola", "Calditerricola satsumensis"], [31924984, "PRJNA195897_P_NODE_11137_length_165_cov_0.896552_g11104_i0", "PRJNA195897", "11137", "165", "0.896552", "1.4793108", "Peptoniphilus", "162289", "Bacteria", "Bacteria", "104", "1.88e-24", "", "NR", "WP_307495097.1", "507751", "g11104", "i0", "100", "1.96363636363636", "54", "0", "98.2", "0", "164", "3", "1945", "1998", "WP_307495097.1 S-layer homology domain-containing protein [Peptoniphilus koenoeneniae]", "diamond", "324", "104", "1", "Bacteria", null, "Bacillati", "Bacillota", "Tissierellia", "Tissierellales", "Peptoniphilaceae", "Peptoniphilus", "Peptoniphilus koenoeneniae"]], "truncated": false, "filtered_table_rows_count": 21, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA195897", "p2": "Bacillota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA195897&tax_phylum=Bacillota", "results": [{"value": "PRJNA195897", "label": "PRJNA195897", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Bacillota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA195897&tax_phylum=Bacillota", "results": [{"value": "diamond", "label": "diamond", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA195897&tax_phylum=Bacillota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA195897&tax_phylum=Bacillota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA195897&tax_phylum=Bacillota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA195897&tax_phylum=Bacillota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA195897&tax_phylum=Bacillota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA195897&tax_phylum=Bacillota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA195897&tax_phylum=Bacillota", "results": [{"value": "Bacillota", "label": "Bacillota", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA195897", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 204.61491699097678}