{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA1249535\" and tax_kingdom = \"Methanobacteriati\"", "rows": [[27376492, "PRJNA1249535_S_NODE_332083_length_232_cov_3.100629_g328700_i0", "PRJNA1249535", "332083", "232", "3.100629", "7.19345928", "Haloferax", "2251", "Archaea", "Archaea", "42.4", "0.0447", "", "NR", "WP_004970558.1", "35745", "g328700", "i0", "33.3", "2.68965517241379", "69", "32", "71.1", "1", "168", "4", "242", "310", "WP_004970558.1 L-lactate permease [Haloferax denitrificans]", "diamond", "624", "42.4", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", "Haloferacaceae", "Haloferax", "Haloferax denitrificans"], [28115872, "PRJNA1249535_S_NODE_211005_length_300_cov_4.207048_g207622_i0", "PRJNA1249535", "211005", "300", "4.207048", "12.621144", "Methanobrevibacter boviskoreani", "1348249", "Archaea", "Archaea", "143", "1.43e-38", "", "NR", "WP_274952164.1", "1348249", "g207622", "i0", "71", "1", "100", "29", "100", "0", "1", "300", "60", "159", "WP_274952164.1 ATP-binding protein [Methanobrevibacter boviskoreani]", "diamond", "300", "143", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter boviskoreani"], [28778870, "PRJNA1249535_S_NODE_101507_length_373_cov_4.330000_g98124_i0", "PRJNA1249535", "101507", "373", "4.33", "16.1509", "Candidatus Methanolliviera hydrocarbonicum", "2491085", "Archaea", "Archaea", "45.4", "0.0173", "", "NR", "RZN68674.1", "2491085", "g98124", "i0", "29.5", "0.764075067024129", "95", "56", "73.2", "3", "318", "46", "362", "449", "RZN68674.1 MAG: acyl-CoA dehydrogenase [Candidatus Methanolliviera hydrocarbonicum]", "diamond", "285", "45.4", "1", "Archaea", null, "Methanobacteriati", "Methanobacteriota", "Candidatus Methanoliparia", "Candidatus Methanoliparales", "Candidatus Methanollivieraceae", "Candidatus Methanolliviera", "Candidatus Methanolliviera hydrocarbonicum"], [29031841, "PRJNA1249535_S_NODE_152148_length_334_cov_1.984674_g148765_i0", "PRJNA1249535", "152148", "334", "1.984674", "6.62881116", "Thermoplasmatota archaeon", "2806419", "Archaea", "Archaea", "45.8", "0.00914", "", "NR", "MEE8565855.1", "2806419", "g148765", "i0", "50", "0.323353293413174", "36", "17", "32.3", "1", "301", "194", "1190", "1224", "MEE8565855.1 hypothetical protein [Thermoplasmatota archaeon]", "diamond", "108", "45.8", "1", "Archaea", null, "Methanobacteriati", "Thermoplasmatota", null, null, null, null, "Thermoplasmatota archaeon"], [30105247, "PRJNA1249535_S_NODE_290932_length_257_cov_11.391304_g287549_i0", "PRJNA1249535", "290932", "257", "11.391304", "29.27565128", "Halobacteriales archaeon SW_9_67_25", "1919210", "Archaea", "Archaea", "41.2", "0.0251", "", "NR", "PSQ59589.1", "1919210", "g287549", "i0", "30.9", "0.642023346303502", "55", "38", "64.2", "0", "239", "75", "7", "61", "PSQ59589.1 MAG: hypothetical protein BRD23_04035 [Halobacteriales archaeon SW_9_67_25]", "diamond", "165", "41.2", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Halobacteria", "Halobacteriales", null, null, "Halobacteriales archaeon SW_9_67_25"], [30231731, "PRJNA1249535_S_NODE_301852_length_252_cov_0.871508_g298469_i0", "PRJNA1249535", "301852", "252", "0.871508", "2.19620016", "Thermoplasmata archaeon", "1906666", "Archaea", "Archaea", "42.7", "0.00741", "", "NR", "MCK5773661.1", "1906666", "g298469", "i0", "35.5", "0.738095238095238", "62", "36", "72.6", "2", "190", "8", "5", "63", "MCK5773661.1 50S ribosomal protein L37Ae [Thermoplasmata archaeon]", "diamond", "186", "42.7", "1", "Archaea", null, "Methanobacteriati", "Thermoplasmatota", "Thermoplasmata", null, null, null, "Thermoplasmata archaeon"], [30295297, "PRJNA1249535_S_NODE_229192_length_291_cov_2.119266_g225809_i0", "PRJNA1249535", "229192", "291", "2.119266", "6.16706406", "Thermoplasmata archaeon", "1906666", "Archaea", "Archaea", "43.1", "0.031", "", "NR", "UCF07645.1", "1906666", "g225809", "i0", "53.3", "0.309278350515464", "30", "14", "30.9", "0", "225", "136", "57", "86", "UCF07645.1 MAG: GTP-binding protein [Thermoplasmata archaeon]", "diamond", "90", "43.1", "1", "Archaea", null, "Methanobacteriati", "Thermoplasmatota", "Thermoplasmata", null, null, null, "Thermoplasmata archaeon"], [30421634, "PRJNA1249535_S_NODE_168653_length_324_cov_1.322709_g165270_i0", "PRJNA1249535", "168653", "324", "1.322709", "4.28557716", "Methanosphaera sp.", "2666342", "Archaea", "Archaea", "43.5", "0.0466", "", "NR", "MBQ6220651.1", "2666342", "g165270", "i0", "38.6", "0.527777777777778", "57", "34", "51.9", "1", "268", "101", "259", "315", "MBQ6220651.1 transposase [Methanosphaera sp.]", "diamond", "171", "43.5", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanosphaera", "Methanosphaera sp."], [30628608, "PRJNA1249535_S_NODE_281433_length_263_cov_1.942105_g278050_i0", "PRJNA1249535", "281433", "263", "1.942105", "5.10773615", "Methanobacterium", "2160", "Archaea", "Archaea", "43.9", "0.0134", "", "NR", "MBI4812854.1", "2164", "g278050", "i0", "26.2", "2.08745247148289", "61", "44", "68.4", "1", "21", "200", "81", "141", "MBI4812854.1 preprotein translocase subunit SecD [Methanobacterium sp.]", "diamond", "549", "43.9", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp."], [32413452, "PRJNA1249535_S_NODE_76179_length_408_cov_2.322388_g72798_i0", "PRJNA1249535", "76179", "408", "2.322388", "9.47534304", "uncultured Methanomethylovorans sp.", "183759", "Archaea", "Archaea", "45.8", "0.0169", "", "NR", "WP_321416730.1", "183759", "g72798", "i0", "36.4", "0.485294117647059", "66", "38", "45.6", "1", "31", "216", "371", "436", "WP_321416730.1 RNA-guided endonuclease InsQ/TnpB family protein [uncultured Methanomethylovorans sp.]", "diamond", "198", "45.8", "1", "Archaea", "Stenosarchaea group", "Methanobacteriati", "Methanobacteriota", "Methanomicrobia", "Methanosarcinales", "Methanosarcinaceae", "Methanomethylovorans", "uncultured Methanomethylovorans sp."]], "truncated": false, "filtered_table_rows_count": 10, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_kingdom\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA1249535", "p2": "Methanobacteriati"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1249535&tax_kingdom=Methanobacteriati", "results": [{"value": "PRJNA1249535", "label": "PRJNA1249535", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_kingdom=Methanobacteriati", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1249535&tax_kingdom=Methanobacteriati", "results": [{"value": "diamond", "label": "diamond", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1249535&tax_kingdom=Methanobacteriati", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1249535&tax_kingdom=Methanobacteriati", "results": [{"value": "Archaea", "label": "Archaea", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1249535&tax_kingdom=Methanobacteriati&tax_superkingdom=Archaea", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1249535&tax_kingdom=Methanobacteriati", "results": [{"value": "Methanomada group", "label": "Methanomada group", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1249535&tax_kingdom=Methanobacteriati&tax_clade=Methanomada+group", "selected": false}, {"value": "Stenosarchaea group", "label": "Stenosarchaea group", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1249535&tax_kingdom=Methanobacteriati&tax_clade=Stenosarchaea+group", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1249535&tax_kingdom=Methanobacteriati", "results": [{"value": "Methanobacteriati", "label": "Methanobacteriati", "count": 10, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1249535", "selected": true}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1249535&tax_kingdom=Methanobacteriati", "results": [{"value": "Methanobacteriota", "label": "Methanobacteriota", "count": 7, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1249535&tax_kingdom=Methanobacteriati&tax_phylum=Methanobacteriota", "selected": false}, {"value": "Thermoplasmatota", "label": "Thermoplasmatota", "count": 3, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1249535&tax_kingdom=Methanobacteriati&tax_phylum=Thermoplasmatota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 233.3176120009739}