{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA1233317\" and tax_phylum = \"Actinomycetota\"", "rows": [[1610244, "PRJNA1233317_S_NODE_14562_length_201_cov_3.007042_g14526_i0", "PRJNA1233317", "14562", "201", "3.007042", "6.04415442", "Arthrobacter russicus", "172040", "Bacteria", "Bacteria", "149", "4.24e-43", "", "NR", "WP_309796214.1", "172040", "g14526", "i0", "100", "1", "67", "0", "100", "0", "1", "201", "119", "185", "WP_309796214.1 class I SAM-dependent methyltransferase [Arthrobacter russicus]", "diamond", "201", "149", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Micrococcaceae", "Arthrobacter", "Arthrobacter russicus"], [5438937, "PRJNA1233317_S_NODE_9525_length_252_cov_0.948187_g9489_i0", "PRJNA1233317", "9525", "252", "0.948187", "2.38943124", "Microbacterium", "33882", "Bacteria", "Bacteria", "115", "3.2000000000000003e-28", "", "NR", "WP_045247306.1", "33882", "g9489", "i0", "95.2", "0.738095238095238", "62", "3", "73.8", "0", "4", "189", "349", "410", "WP_045247306.1 MULTISPECIES: gephyrin-like molybdotransferase Glp [Microbacterium]", "diamond", "186", "115", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", "Microbacterium", null], [13089311, "PRJNA1233317_S_NODE_3651_length_345_cov_3.461538_g3615_i0", "PRJNA1233317", "3651", "345", "3.461538", "11.9423061", "Microbacterium", "33882", "Bacteria", "Bacteria", "219", "2.07e-65", "", "NR", "WP_288453179.1", "191216", "g3615", "i0", "100", "3", "115", "0", "100", "0", "345", "1", "370", "484", "WP_288453179.1 type VII secretion protein EccCa, partial [uncultured Microbacterium sp.]", "diamond", "1035", "219", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", "Microbacterium", "uncultured Microbacterium sp."], [26597635, "PRJNA1233317_S_NODE_6581_length_292_cov_32.360515_g6545_i0", "PRJNA1233317", "6581", "292", "32.360515", "94.4927038", "Microthrixaceae bacterium", "2497627", "Bacteria", "Bacteria", "43.1", "0.044", "", "NR", "MEZ5269981.1", "2497627", "g6545", "i0", "48.6", "0.38013698630137", "37", "19", "38", "0", "178", "288", "242", "278", "MEZ5269981.1 enoyl-CoA hydratase-related protein [Microthrixaceae bacterium]", "diamond", "111", "43.1", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Acidimicrobiia", "Acidimicrobiales", "Microthrixaceae", null, "Microthrixaceae bacterium"], [26977850, "PRJNA1233317_S_NODE_8322_length_267_cov_12.062500_g8286_i0", "PRJNA1233317", "8322", "267", "12.0625", "32.206875", "Haloechinothrix halophila", "1069073", "Bacteria", "Bacteria", "43.9", "0.019", "", "NR", "WP_034268929.1", "1069073", "g8286", "i0", "42", "0.561797752808989", "50", "25", "51.7", "1", "35", "172", "102", "151", "WP_034268929.1 amidohydrolase [Haloechinothrix halophila]", "diamond", "150", "43.9", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Pseudonocardiales", "Pseudonocardiaceae", "Haloechinothrix", "Haloechinothrix halophila"], [27294016, "PRJNA1233317_S_NODE_9183_length_256_cov_3.091371_g9147_i0", "PRJNA1233317", "9183", "256", "3.091371", "7.91390976", "Actinomycetota bacterium", "2900548", "Bacteria", "Bacteria", "43.1", "0.0305", "", "NR", "MBW3661883.1", "2900548", "g9147", "i0", "40.4", "0.609375", "52", "27", "56.3", "1", "255", "112", "201", "252", "MBW3661883.1 DUF222 domain-containing protein [Actinomycetota bacterium]", "diamond", "156", "43.1", "1", "Bacteria", null, "Bacillati", "Actinomycetota", null, null, null, null, "Actinomycetota bacterium"], [27470848, "PRJNA1233317_S_NODE_5843_length_304_cov_3.648980_g5807_i0", "PRJNA1233317", "5843", "304", "3.64898", "11.0928992", "Bacillati", "1783272", "Bacteria", "Bacteria", "198", "2.66e-61", "", "NR", "PYC99595.1", "57043", "g5807", "i0", "100", "1.83552631578947", "93", "0", "91.8", "0", "280", "2", "22", "114", "PYC99595.1 hypothetical protein B4U78_015940, partial [Microbacterium esteraromaticum]", "diamond", "558", "198", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", "Microbacterium", "Microbacterium esteraromaticum"], [27692044, "PRJNA1233317_S_NODE_9704_length_249_cov_3.784211_g9668_i0", "PRJNA1233317", "9704", "249", "3.784211", "9.42268539", "Bacillati", "1783272", "Bacteria", "Bacteria", "106", "4.6e-27", "", "NR", "PYC99492.1", "57043", "g9668", "i0", "78.3", "1.66265060240964", "69", "15", "83.1", "0", "246", "40", "84", "152", "PYC99492.1 hypothetical protein B4U78_016815, partial [Microbacterium esteraromaticum]", "diamond", "414", "106", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", "Microbacterium", "Microbacterium esteraromaticum"], [28872743, "PRJNA1233317_S_NODE_16568_length_187_cov_3.257812_g16532_i0", "PRJNA1233317", "16568", "187", "3.257812", "6.09210844", "Streptomyces sp. NPDC", "1931", "Bacteria", "Bacteria", "41.6", "0.0449", "", "NR", "WP_362335506.1", "3155130", "g16532", "i0", "39.5", "0.689839572192513", "43", "26", "69", "0", "39", "167", "444", "486", "WP_362335506.1 protein kinase domain-containing protein [Streptomyces sp. NPDC041068]", "diamond", "129", "41.6", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces sp. NPDC041068"], [29125681, "PRJNA1233317_S_NODE_8029_length_272_cov_0.976526_g7993_i0", "PRJNA1233317", "8029", "272", "0.976526", "2.65615072", "Streptomyces triticiradicis", "2651189", "Bacteria", "Bacteria", "43.1", "0.037", "", "NR", "WP_151473195.1", "2651189", "g7993", "i0", "33.8", "0.816176470588235", "74", "38", "73.9", "2", "70", "270", "28", "97", "WP_151473195.1 M20 family metallopeptidase [Streptomyces triticiradicis]", "diamond", "222", "43.1", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces triticiradicis"], [30009735, "PRJNA1233317_S_NODE_15251_length_196_cov_5.043796_g15215_i0", "PRJNA1233317", "15251", "196", "5.043796", "9.88584016", "Ornithinimicrobium avium", "2283195", "Bacteria", "Bacteria", "85.1", "6.1e-18", "", "NR", "WP_162802826.1", "2283195", "g15215", "i0", "67.2", "0.979591836734694", "64", "21", "98", "0", "4", "195", "57", "120", "WP_162802826.1 Flp pilus assembly protein CpaB [Ornithinimicrobium avium]", "diamond", "192", "85.1", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Ornithinimicrobiaceae", "Ornithinimicrobium", "Ornithinimicrobium avium"], [31368586, "PRJNA1233317_S_NODE_9936_length_246_cov_2.935829_g9900_i0", "PRJNA1233317", "9936", "246", "2.935829", "7.22213934", "Streptomyces roseolus", "67358", "Bacteria", "Bacteria", "42.4", "0.0083", "", "NR", "WP_359530280.1", "67358", "g9900", "i0", "45.7", "0.560975609756098", "46", "23", "56.1", "1", "98", "235", "29", "72", "WP_359530280.1 chaplin [Streptomyces roseolus]", "diamond", "138", "42.4", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces roseolus"], [32114832, "PRJNA1233317_S_NODE_10158_length_244_cov_1.772973_g10122_i0", "PRJNA1233317", "10158", "244", "1.772973", "4.32605412", "Bacillati", "1783272", "Bacteria", "Bacteria", "153", "3.81e-44", "", "NR", "PYC99595.1", "57043", "g10122", "i0", "100", "1.99180327868852", "81", "0", "99.6", "0", "2", "244", "153", "233", "PYC99595.1 hypothetical protein B4U78_015940, partial [Microbacterium esteraromaticum]", "diamond", "486", "153", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", "Microbacterium", "Microbacterium esteraromaticum"]], "truncated": false, "filtered_table_rows_count": 13, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA1233317", "p2": "Actinomycetota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1233317&tax_phylum=Actinomycetota", "results": [{"value": "PRJNA1233317", "label": "PRJNA1233317", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1233317&tax_phylum=Actinomycetota", "results": [{"value": "diamond", "label": "diamond", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1233317&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1233317&tax_phylum=Actinomycetota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1233317&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1233317&tax_phylum=Actinomycetota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1233317&tax_phylum=Actinomycetota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1233317&tax_phylum=Actinomycetota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1233317&tax_phylum=Actinomycetota", "results": [{"value": "Actinomycetota", "label": "Actinomycetota", "count": 13, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1233317", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 418.8872080121655}