{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA1200128\" and tax_phylum = \"Campylobacterota\"", "rows": [[2878050, "PRJNA1200128_S_NODE_7943_length_272_cov_1.231441_g7834_i0", "PRJNA1200128", "7943", "272", "1.231441", "3.34951952", "root", "1", "Root_unresolved", "Root_unresolved", "109", "1.2e-27", "", "NR", "GAA8948808.1", "210", "g7834", "i0", "68.8", "3.51838235294118", "77", "24", "84.9", "0", "41", "271", "11", "87", "GAA8948808.1 hypothetical protein Kyoto181A_0780 [Helicobacter pylori]", "diamond", "957", "110", "0.990909090909091", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [6704817, "PRJNA1200128_S_NODE_21266_length_200_cov_1.496815_g21157_i0", "PRJNA1200128", "21266", "200", "1.496815", "2.99363", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "57.4", 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"MBE0495799.1", "2268180", "g40586", "i0", "88.7", "1.97515527950311", "53", "6", "98.8", "0", "3", "161", "114", "166", "MBE0495799.1 tRNA (guanosine(37)-N1)-methyltransferase TrmD [Campylobacterales bacterium]", "diamond", "318", "100", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", null, null, "Campylobacterales bacterium"], [31779209, "PRJNA1200128_S_NODE_45357_length_155_cov_1.258929_g45248_i0", "PRJNA1200128", "45357", "155", "1.258929", "1.95133995", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "39.3", "0.0278", "", "NR", "GAA8883080.1", "210", "g45248", "i0", "42.9", "0.948387096774194", "49", "27", "94.8", "1", "8", "154", "5", "52", "GAA8883080.1 hypothetical protein Kyoto154A_4660 [Helicobacter pylori]", "diamond", "147", "39.3", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32304746, "PRJNA1200128_S_NODE_38959_length_163_cov_2.350000_g38850_i0", "PRJNA1200128", "38959", "163", "2.35", "3.8305", "root", "1", "Root_unresolved", "Root_unresolved", "42", "0.00713", "", "NR", "GAA6860864.1", "210", "g38850", "i0", "66.7", "0.993865030674847", "27", "9", "49.7", "0", "162", "82", "77", "103", "GAA6860864.1 hypothetical protein Kyoto206A_1490 [Helicobacter pylori]", "diamond", "162", "42", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32727826, "PRJNA1200128_S_NODE_34280_length_171_cov_1.101562_g34171_i0", "PRJNA1200128", "34280", "171", "1.101562", "1.88367102", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "50.8", "3.38e-6", "", "NR", "GAA8954509.1", "210", "g34171", "i0", "52.9", "0.894736842105263", "51", "20", "82.5", "2", "154", "14", "42", "92", "GAA8954509.1 hypothetical protein Kyoto181A_2710 [Helicobacter pylori]", "diamond", "153", "50.8", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"]], "truncated": false, "filtered_table_rows_count": 20, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA1200128", "p2": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1200128&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA1200128", "label": "PRJNA1200128", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1200128&tax_phylum=Campylobacterota", "results": [{"value": "diamond", "label": "diamond", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1200128&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1200128&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1200128&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1200128&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1200128&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1200128&tax_phylum=Campylobacterota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1200128&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 20, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1200128", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 443.993294989923}