{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA1195551\" and tax_phylum = \"Bacillota\"", "rows": [[11801124, "PRJNA1195551_S_NODE_35810_length_170_cov_5.818182_g35457_i0", "PRJNA1195551", "35810", "170", "5.818182", "9.8909094", "Oscillospiraceae bacterium", "2485925", "Bacteria", "Bacteria", "108", "3.9e-26", "", "NR", "GKH46160.1", "2485925", "g35457", "i0", "89.1", "0.970588235294118", "55", "6", "97.1", "0", "4", "168", "83", "137", "GKH46160.1 hypothetical protein CE91St45_07220 [Oscillospiraceae bacterium]", "diamond", "165", "108", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Oscillospiraceae", null, "Oscillospiraceae bacterium"], [26723804, "PRJNA1195551_S_NODE_41861_length_159_cov_3.309091_g41508_i0", "PRJNA1195551", "41861", "159", "3.309091", "5.26145469", "Oscillospiraceae bacterium", "2485925", "Bacteria", "Bacteria", "39.3", "0.0455", "", "NR", "MBR5381399.1", "2485925", "g41508", "i0", "45.9", "0.69811320754717", "37", "19", "67.9", "1", "50", "157", "17", "53", "MBR5381399.1 hypothetical protein [Oscillospiraceae bacterium]", "diamond", "111", "39.3", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Oscillospiraceae", null, "Oscillospiraceae bacterium"], [27262211, "PRJNA1195551_S_NODE_15463_length_250_cov_1.293532_g15110_i0", "PRJNA1195551", "15463", "250", "1.293532", "3.23383", "Gemella haemolysans", "1379", "Bacteria", "Bacteria", "156", "5.0799999999999996e-42", "", "NR", "WP_304096177.1", "1379", "g15110", "i0", "97.4", "0.936", "78", "2", "93.6", "0", "236", "3", "319", "396", "WP_304096177.1 DUF1542 domain-containing protein, partial [Gemella haemolysans]", "diamond", "234", "156", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Gemellaceae", "Gemella", "Gemella haemolysans"], [27325349, "PRJNA1195551_S_NODE_21323_length_217_cov_4.136905_g20970_i0", "PRJNA1195551", "21323", "217", "4.136905", "8.97708385", "Mogibacterium sp.", "2049035", "Bacteria", "Bacteria", "116", "1e-30", "", "NR", "MBR0307923.1", "2049035", "g20970", "i0", "77.5", "0.981566820276498", "71", "16", "98.2", "0", "213", "1", "54", "124", "MBR0307923.1 macro domain-containing protein [Mogibacterium sp.]", "diamond", "213", "116", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Peptostreptococcales", "Anaerovoracaceae", "Mogibacterium", "Mogibacterium sp."], [28020162, "PRJNA1195551_S_NODE_21645_length_216_cov_2.179641_g21292_i0", "PRJNA1195551", "21645", "216", "2.179641", "4.70802456", "Anaerococcus", "165779", "Bacteria", "Bacteria", "136", "3.51e-36", "", "NR", "WP_117520670.1", "165779", "g21292", "i0", "98.6", "1.97222222222222", "71", "1", "98.6", "0", "215", "3", "192", "262", "WP_117520670.1 MULTISPECIES: transcription termination factor NusA [Anaerococcus]", "diamond", "426", "136", "1", "Bacteria", null, "Bacillati", "Bacillota", "Tissierellia", "Tissierellales", "Peptoniphilaceae", "Anaerococcus", null], [28146501, "PRJNA1195551_S_NODE_16705_length_241_cov_20.395833_g16352_i0", "PRJNA1195551", "16705", "241", "20.395833", "49.15395753", "Erysipelotrichaceae bacterium", "2049044", "Bacteria", "Bacteria", "42.7", "0.0366", "", "NR", "MEA5061696.1", "2049044", "g16352", "i0", "33.8", "0.846473029045643", "68", "38", "78.4", "2", "4", "192", "183", "248", "MEA5061696.1 ComEC/Rec2 family competence protein [Erysipelotrichaceae bacterium]", "diamond", "204", "42.7", "1", "Bacteria", null, "Bacillati", "Bacillota", "Erysipelotrichia", "Erysipelotrichales", "Erysipelotrichaceae", null, "Erysipelotrichaceae bacterium"], [28177637, "PRJNA1195551_S_NODE_9906_length_296_cov_4.623482_g9553_i0", "PRJNA1195551", "9906", "296", "4.623482", "13.68550672", "Lachnospiraceae bacterium", "1898203", "Bacteria", "Bacteria", "181", "4.889999999999999e-55", "", "NR", "MEE1164214.1", "1898203", "g9553", "i0", "89.8", "0.993243243243243", "98", "10", "99.3", "0", "296", "3", "130", "227", "MEE1164214.1 tail fiber domain-containing protein [Lachnospiraceae bacterium]", "diamond", "294", "181", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Lachnospirales", "Lachnospiraceae", null, "Lachnospiraceae bacterium"], [28462270, "PRJNA1195551_S_NODE_33606_length_175_cov_4.769841_g33253_i0", "PRJNA1195551", "33606", "175", "4.769841", "8.34722175", "Clostridiales bacterium", "1898207", "Bacteria", "Bacteria", "41.6", "0.0393", "", "NR", "NLE68665.1", "1898207", "g33253", "i0", "51.4", "0.634285714285714", "37", "15", "63.4", "1", "31", "141", "97", "130", "NLE68665.1 hypothetical protein [Clostridiales bacterium]", "diamond", "111", "41.6", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", null, null, "Clostridiales bacterium"], [28588519, "PRJNA1195551_S_NODE_42207_length_158_cov_3.770642_g41854_i0", "PRJNA1195551", "42207", "158", "3.770642", "5.95761436", "Blautia sp. CAG:257", "1262756", "Bacteria", "Bacteria", "41.2", "0.0395", "", "NR", "WP_022068475.1", "1262756", "g41854", "i0", "52.9", "0.645569620253165", "34", "16", "64.6", "0", "13", "114", "105", "138", "WP_022068475.1 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO [Blautia sp. CAG:257]", "diamond", "102", "41.2", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Lachnospirales", "Lachnospiraceae", "Blautia", "Blautia sp. CAG:257"], [28746202, "PRJNA1195551_S_NODE_27807_length_192_cov_1.454545_g27454_i0", "PRJNA1195551", "27807", "192", "1.454545", "2.7927264", "uncultured Anaerococcus sp.", "293428", "Bacteria", "Bacteria", "82.4", "2.53e-18", "", "NR", "WP_297281722.1", "293428", "g27454", "i0", "69.4", "0.96875", "62", "19", "96.9", "0", "187", "2", "1", "62", "WP_297281722.1 YbgA family protein [uncultured Anaerococcus sp.]", "diamond", "186", "82.4", "1", "Bacteria", null, "Bacillati", "Bacillota", "Tissierellia", "Tissierellales", "Peptoniphilaceae", "Anaerococcus", "uncultured Anaerococcus sp."], [28809037, "PRJNA1195551_S_NODE_18368_length_232_cov_2.546448_g18015_i0", "PRJNA1195551", "18368", "232", "2.546448", "5.90775936", "Oscillospiraceae bacterium", "2485925", "Bacteria", "Bacteria", "42.7", "0.0134", "", "NR", "PWM72267.1", "2485925", "g18015", "i0", "43.8", "0.620689655172414", "48", "25", "62.1", "1", "13", "156", "80", "125", "PWM72267.1 MAG: hypothetical protein DBX45_09220 [Oscillospiraceae bacterium]", "diamond", "144", "42.7", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Oscillospiraceae", null, "Oscillospiraceae bacterium"], [28903858, "PRJNA1195551_S_NODE_20408_length_221_cov_6.732558_g20055_i0", "PRJNA1195551", "20408", "221", "6.732558", "14.87895318", "Atopostipes sp.", "1872652", "Bacteria", "Bacteria", "106", "2.57e-28", "", "NR", "HZK47593.1", "1872652", "g20055", "i0", "98.1", "0.719457013574661", "53", "1", "71.9", "0", "2", "160", "26", "78", "HZK47593.1 DUF2922 domain-containing protein [Atopostipes sp.]", "diamond", "159", "106", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Carnobacteriaceae", "Atopostipes", "Atopostipes sp."], [29219979, "PRJNA1195551_S_NODE_26909_length_195_cov_1.780822_g26556_i0", "PRJNA1195551", "26909", "195", "1.780822", "3.4726029", "Ligaoa zhengdingensis", "2763658", "Bacteria", "Bacteria", "42.7", "0.0176", "", "NR", "WP_249283445.1", "2763658", "g26556", "i0", "36.2", "1.06153846153846", "69", "29", "93.8", "2", "5", "187", "20", "81", "WP_249283445.1 putative ABC transporter permease [Ligaoa zhengdingensis]", "diamond", "207", "42.7", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Oscillospiraceae", "Ligaoa", "Ligaoa zhengdingensis"], [29301983, "PRJNA1195551_S_NODE_5029_length_384_cov_4.564179_g4676_i0", "PRJNA1195551", "5029", "384", "4.564179", "17.52644736", "Bacillaceae", "186817", "Bacteria", "Bacteria", "186", "8.929999999999999e-56", "", "NR", "WP_035178386.1", "246272", "g4676", "i0", "77.4", "4.140625", "106", "24", "82.8", "0", "319", "2", "196", "301", "WP_035178386.1 VanW family protein [Alkalihalobacterium bogoriense]", "diamond", "1590", "187", "0.994652406417112", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Alkalihalobacterium", "Alkalihalobacterium bogoriense"], [29472122, "PRJNA1195551_S_NODE_18930_length_229_cov_2.222222_g18577_i0", "PRJNA1195551", "18930", "229", "2.222222", "5.08888838", "Streptococcus mitis", "28037", "Bacteria", "Bacteria", "95.1", "1.3700000000000002e-21", "", "NR", "WP_414339826.1", "28037", "g18577", "i0", "76.3", "2.84279475982533", "76", "18", "99.6", "0", "229", "2", "14", "89", "WP_414339826.1 DUF1542 domain-containing protein, partial [Streptococcus mitis]", "diamond", "651", "95.1", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Streptococcaceae", "Streptococcus", "Streptococcus mitis"], [29819520, "PRJNA1195551_S_NODE_20951_length_219_cov_1.711765_g20598_i0", "PRJNA1195551", "20951", "219", "1.711765", "3.74876535", "Siminovitchia terrae", "1914933", "Bacteria", "Bacteria", "42.4", "0.0283", "", "NR", "WP_213020544.1", "1914933", "g20598", "i0", "44.7", "0.643835616438356", "47", "25", "64.4", "1", "34", "174", "33", "78", "WP_213020544.1 sigma-70 family RNA polymerase sigma factor [Siminovitchia terrae]", "diamond", "141", "42.4", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Siminovitchia", "Siminovitchia terrae"], [29965110, "PRJNA1195551_S_NODE_16031_length_246_cov_2.639594_g15678_i0", "PRJNA1195551", "16031", "246", "2.639594", "6.49340124", "FCB group", "1783270", "Bacteria", "Bacteria", "86.3", "1.42e-17", "", "NR", "WP_031263556.1", "33018", "g15678", "i0", "52.6", "23.1463414634146", "76", "36", "92.7", "0", "246", "19", "282", "357", "WP_031263556.1 NADP-dependent isocitrate dehydrogenase [Sporolactobacillus laevolacticus]", "diamond", "5694", "87", "0.991954022988506", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Sporolactobacillaceae", "Sporolactobacillus", "Sporolactobacillus laevolacticus"], [31304713, "PRJNA1195551_S_NODE_10875_length_286_cov_3.417722_g10522_i0", "PRJNA1195551", "10875", "286", "3.417722", "9.77468492", "Clostridia bacterium", "2044939", "Bacteria", "Bacteria", "78.6", "1e-14", "", "NR", "MBQ6789641.1", "2044939", "g10522", "i0", "93", "0.451048951048951", "43", "3", "45.1", "0", "180", "52", "51", "93", "MBQ6789641.1 phenylalanine--tRNA ligase subunit alpha [Clostridia bacterium]", "diamond", "129", "78.6", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", null, null, null, "Clostridia bacterium"], [31399847, "PRJNA1195551_S_NODE_39376_length_164_cov_2.234783_g39023_i0", "PRJNA1195551", "39376", "164", "2.234783", "3.66504412", "[Clostridium] innocuum", "1522", "Bacteria", "Bacteria", "43.1", "0.00924", "", "NR", "WP_233106945.1", "1522", "g39023", "i0", "45.5", "0.804878048780488", "44", "22", "80.5", "1", "30", "161", "69", "110", "WP_233106945.1 isoaspartyl peptidase/L-asparaginase [[Clostridium] innocuum]", "diamond", "132", "43.1", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Clostridiaceae", "Clostridium", "[Clostridium] innocuum"], [31608436, "PRJNA1195551_S_NODE_10076_length_294_cov_6.404082_g9723_i0", "PRJNA1195551", "10076", "294", "6.404082", "18.82800108", "root", "1", "Root_unresolved", "Root_unresolved", "68.6", "4.88e-11", "", "NR", "WP_330942626.1", "1328", "g9723", "i0", "37.5", "1.63265306122449", "80", "45", "76.5", "2", "247", "23", "251", "330", "WP_330942626.1 hypothetical protein [Streptococcus anginosus]", "diamond", "480", "68.9", "0.995645863570392", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Streptococcaceae", "Streptococcus", "Streptococcus anginosus"], [32032376, "PRJNA1195551_S_NODE_22318_length_213_cov_1.902439_g21965_i0", "PRJNA1195551", "22318", "213", "1.902439", "4.05219507", "Anaerococcus nagyae", "1755241", "Bacteria", "Bacteria", "88.6", "1.49e-19", "", "NR", "WP_117520402.1", "1755241", "g21965", "i0", "100", "0.605633802816901", "43", "0", "60.6", "0", "212", "84", "192", "234", "WP_117520402.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB [Anaerococcus nagyae]", "diamond", "129", "88.6", "1", "Bacteria", null, "Bacillati", "Bacillota", "Tissierellia", "Tissierellales", "Peptoniphilaceae", "Anaerococcus", "Anaerococcus nagyae"]], "truncated": false, "filtered_table_rows_count": 21, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA1195551", "p2": "Bacillota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1195551&tax_phylum=Bacillota", "results": [{"value": "PRJNA1195551", "label": "PRJNA1195551", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Bacillota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1195551&tax_phylum=Bacillota", "results": [{"value": "diamond", "label": "diamond", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1195551&tax_phylum=Bacillota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1195551&tax_phylum=Bacillota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1195551&tax_phylum=Bacillota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1195551&tax_phylum=Bacillota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1195551&tax_phylum=Bacillota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1195551&tax_phylum=Bacillota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1195551&tax_phylum=Bacillota", "results": [{"value": "Bacillota", "label": "Bacillota", "count": 21, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1195551", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 428.217003998725}