{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA1174207\" and tax_phylum = \"Bacillota\"", "rows": [[1590158, "PRJNA1174207_P_NODE_20722_length_311_cov_1.285714_g20193_i0", "PRJNA1174207", "20722", "311", "1.285714", "3.99857054", "Clostridioides difficile", "1496", "Bacteria", "Bacteria", "167", "5.89e-50", "", "NR", "MCJ0157547.1", "1496", "g20193", "i0", "71.6", "5.78778135048232", "102", "25", "98.4", "1", "309", "4", "21", "118", "MCJ0157547.1 WD40 repeat domain-containing protein [Clostridioides difficile]", "diamond", "1800", "167", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Peptostreptococcales", "Peptostreptococcaceae", "Clostridioides", "Clostridioides difficile"], [4142654, "PRJNA1174207_P_NODE_33664_length_251_cov_0.865169_g33135_i0", "PRJNA1174207", "33664", "251", "0.865169", "2.17157419", "Oscillospiraceae bacterium", "2485925", "Bacteria", "Bacteria", "157", "1.8899999999999993e-43", "", "NR", "MCX7657827.1", "2485925", "g33135", "i0", "98.8", "2.97609561752988", "83", "1", "99.2", "0", "2", "250", "389", "471", "MCX7657827.1 ATP-dependent Clp protease ATP-binding subunit [Oscillospiraceae bacterium]", "diamond", "747", "157", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Oscillospiraceae", null, "Oscillospiraceae bacterium"], [5419090, "PRJNA1174207_P_NODE_9905_length_487_cov_2.103865_g9379_i0", "PRJNA1174207", "9905", "487", "2.103865", "10.24582255", "root", "1", "Root_unresolved", "Root_unresolved", "277", "8.109999999999999e-92", "", "NR", "MBO8907837.1", "1280", "g9379", "i0", "80.9", "230.482546201232", "162", "31", "99.8", "0", "1", "486", "85", "246", "MBO8907837.1 hypothetical protein [Staphylococcus aureus]", "diamond", "112245", "278", "0.996402877697842", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Staphylococcaceae", "Staphylococcus", "Staphylococcus aureus"], [27134948, "PRJNA1174207_P_NODE_25402_length_284_cov_1.431280_g24873_i0", "PRJNA1174207", "25402", "284", "1.43128", "4.0648352", "Bacillus velezensis", "492670", "Bacteria", "Bacteria", "194", "4.22e-62", "", "NR", "MEA5632492.1", "492670", "g24873", "i0", "98.9", "2.97887323943662", "94", "1", "99.3", "0", "2", "283", "12", "105", "MEA5632492.1 4'-phosphopantetheinyl transferase [Bacillus velezensis]", "diamond", "846", "194", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Bacillus", "Bacillus velezensis"], [27546090, "PRJNA1174207_P_NODE_26344_length_280_cov_1.362319_g25815_i0", "PRJNA1174207", "26344", "280", "1.362319", "3.8144932", "Alkalihalobacterium alkalinitrilicum", "427920", "Bacteria", "Bacteria", "177", "2.03e-49", "", "NR", "WP_238457938.1", "427920", "g25815", "i0", "88.2", "0.996428571428571", "93", "11", "99.6", "0", "2", "280", "234", "326", "WP_238457938.1 DEAD/DEAH box helicase [Alkalihalobacterium alkalinitrilicum]", "diamond", "279", "177", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Alkalihalobacterium", "Alkalihalobacterium alkalinitrilicum"], [27988150, "PRJNA1174207_P_NODE_30865_length_261_cov_1.638298_g30336_i0", "PRJNA1174207", "30865", "261", "1.638298", "4.27595778", "Anaeroglobus geminatus", "156456", "Bacteria", "Bacteria", "127", "1.95e-36", "", "NR", "WP_040347123.1", "156456", "g30336", "i0", "95.6", "0.781609195402299", "68", "3", "78.2", "0", "56", "259", "1", "68", "WP_040347123.1 ribosomal L7Ae/L30e/S12e/Gadd45 family protein [Anaeroglobus geminatus]", "diamond", "204", "127", "1", "Bacteria", null, "Bacillati", "Bacillota", "Negativicutes", "Veillonellales", "Veillonellaceae", "Anaeroglobus", "Anaeroglobus geminatus"], [28335404, "PRJNA1174207_P_NODE_37366_length_246_cov_0.890173_g36837_i0", "PRJNA1174207", "37366", "246", "0.890173", "2.18982558", "Anaerococcus sp.", "1872515", "Bacteria", "Bacteria", "159", "2.4899999999999997e-48", "", "NR", "MDU5535107.1", "1872515", "g36837", "i0", "100", "0.926829268292683", "76", "0", "92.7", "0", "18", "245", "1", "76", "MDU5535107.1 butyryl-CoA:acetate CoA-transferase [Anaerococcus sp.]", "diamond", "228", "159", "1", "Bacteria", null, "Bacillati", "Bacillota", "Tissierellia", "Tissierellales", "Peptoniphilaceae", "Anaerococcus", "Anaerococcus sp."], [28398555, "PRJNA1174207_P_NODE_25666_length_283_cov_1.171429_g25137_i0", "PRJNA1174207", "25666", "283", "1.171429", "3.31514407", "Selenomonas sp.", "2053611", "Bacteria", "Bacteria", "152", "2.12e-41", "", "NR", "MBP8598956.1", "2053611", "g25137", "i0", "91.9", "0.911660777385159", "86", "7", "91.2", "0", "26", "283", "1", "86", "MBP8598956.1 type I restriction-modification system subunit M [Selenomonas sp.]", "diamond", "258", "152", "1", "Bacteria", null, "Bacillati", "Bacillota", "Negativicutes", "Selenomonadales", "Selenomonadaceae", "Selenomonas", "Selenomonas sp."], [28859696, "PRJNA1174207_P_NODE_41408_length_241_cov_0.916667_g40879_i0", "PRJNA1174207", "41408", "241", "0.916667", "2.20916747", "root", "1", "Root_unresolved", "Root_unresolved", "43.1", "0.0271", "", "NR", "TKW62483.1", "1308", "g40879", "i0", "58.1", "2.47717842323651", "86", "17", "99.6", "2", "241", "2", "251", "323", "TKW62483.1 MAG: hypothetical protein DI612_08705, partial [Streptococcus thermophilus]", "diamond", "597", "43.1", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Streptococcaceae", "Streptococcus", "Streptococcus thermophilus"], [28986350, "PRJNA1174207_P_NODE_25748_length_282_cov_2.622010_g25219_i0", "PRJNA1174207", "25748", "282", "2.62201", "7.3940682", "Streptococcaceae", "1300", "Bacteria", "Bacteria", "177", "3.45e-53", "", "NR", "WP_068163331.1", "1365", "g25219", "i0", "98.9", "1.97872340425532", "93", "1", "98.9", "0", "2", "280", "109", "201", "WP_068163331.1 carbohydrate ABC transporter permease [Lactococcus plantarum]", "diamond", "558", "177", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Streptococcaceae", "Pseudolactococcus", "Pseudolactococcus plantarum"], [29661089, "PRJNA1174207_P_NODE_33390_length_251_cov_0.865169_g32861_i0", "PRJNA1174207", "33390", "251", "0.865169", "2.17157419", "Clostridiales bacterium S5-A14a", "1230734", "Bacteria", "Bacteria", "151", "9.959999999999997e-43", "", "NR", "KGF09301.1", "1230734", "g32861", "i0", "100", "0.884462151394422", "74", "0", "88.4", "0", "250", "29", "272", "345", "KGF09301.1 hypothetical protein HMPREF1635_03630 [Clostridiales bacterium S5-A14a]", "diamond", "222", "151", "1", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Peptostreptococcales", "Anaerovoracaceae", null, "Clostridiales bacterium S5-A14a"], [29914351, "PRJNA1174207_P_NODE_39291_length_244_cov_0.900585_g38762_i0", "PRJNA1174207", "39291", "244", "0.900585", "2.1974274", "Metabacillus sp.", "2675275", "Bacteria", "Bacteria", "148", "3.21e-41", "", "NR", "HZH60177.1", "2675275", "g38762", "i0", "87.7", "0.995901639344262", "81", "10", "99.6", "0", "243", "1", "4", "84", "HZH60177.1 rod shape-determining protein RodA [Metabacillus sp.]", "diamond", "243", "148", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Metabacillus", "Metabacillus sp."], [30325420, "PRJNA1174207_P_NODE_28732_length_270_cov_1.203046_g28203_i0", "PRJNA1174207", "28732", "270", "1.203046", "3.2482242", "Bacillus toyonensis", "155322", "Bacteria", "Bacteria", "51.6", "1.64e-5", "", "NR", "MBG9885229.1", "155322", "g28203", "i0", "63.4", "0.455555555555556", "41", "15", "45.6", "0", "2", "124", "39", "79", "MBG9885229.1 hypothetical protein [Bacillus toyonensis]", "diamond", "123", "51.6", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Bacillaceae", "Bacillus", "Bacillus toyonensis"], [30325425, "PRJNA1174207_P_NODE_41072_length_241_cov_2.220238_g40543_i0", "PRJNA1174207", "41072", "241", "2.220238", "5.35077358", "Lactococcus plantarum", "1365", "Bacteria", "Bacteria", "147", "5.59e-40", "", "NR", "WP_068161750.1", "1365", "g40543", "i0", "96.3", "0.995850622406639", "80", "3", "99.6", "0", "241", "2", "283", "362", "WP_068161750.1 MFS transporter [Lactococcus plantarum]", "diamond", "240", "147", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Streptococcaceae", "Pseudolactococcus", "Pseudolactococcus plantarum"], [30818038, "PRJNA1174207_P_NODE_29934_length_265_cov_1.390625_g29405_i0", "PRJNA1174207", "29934", "265", "1.390625", "3.68515625", "Bacillati", "1783272", "Bacteria", "Bacteria", "53.9", "5.38e-6", "", "NR", "CDC80126.1", "1262848", "g29405", "i0", "37.2", "7.07547169811321", "86", "54", "97.4", "0", "3", "260", "259", "344", "CDC80126.1 yjeF domain protein [Clostridium sp. CAG:964]", "diamond", "1875", "54.3", "0.992633517495396", "Bacteria", null, "Bacillati", "Bacillota", "Clostridia", "Eubacteriales", "Clostridiaceae", "Clostridium", "Clostridium sp. CAG:964"], [31778807, "PRJNA1174207_P_NODE_34077_length_250_cov_1.333333_g33548_i0", "PRJNA1174207", "34077", "250", "1.333333", "3.3333325", "Streptococcus", "1301", "Bacteria", "Bacteria", "144", "5.499999999999999e-39", "", "NR", "WP_244491692.1", "1301", "g33548", "i0", "81.9", "1.992", "83", "15", "99.6", "0", "250", "2", "192", "274", "WP_244491692.1 MULTISPECIES: serine/threonine-protein kinase [Streptococcus]", "diamond", "498", "144", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Lactobacillales", "Streptococcaceae", "Streptococcus", null], [32695711, "PRJNA1174207_P_NODE_21720_length_306_cov_1.266094_g21191_i0", "PRJNA1174207", "21720", "306", "1.266094", "3.87424764", "Staphylococcus warneri", "1292", "Bacteria", "Bacteria", "87.4", "1.37e-20", "", "NR", "MDU1259852.1", "1292", "g21191", "i0", "95.5", "0.431372549019608", "44", "2", "43.1", "0", "215", "84", "1", "44", "MDU1259852.1 hypothetical protein [Staphylococcus warneri]", "diamond", "132", "87.4", "1", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Staphylococcaceae", "Staphylococcus", "Staphylococcus warneri"], [32840779, "PRJNA1174207_P_NODE_42280_length_235_cov_7.024691_g41751_i0", "PRJNA1174207", "42280", "235", "7.024691", "16.50802385", "Bacteria", "2", "Bacteria", "Bacteria", "143", "7.19e-42", "", "NR", "MDG6689955.1", "1280", "g41751", "i0", "88.3", "4.91489361702128", "77", "9", "98.3", "0", "233", "3", "21", "97", "MDG6689955.1 transposase [Staphylococcus aureus]", "diamond", "1155", "144", "0.993055555555556", "Bacteria", null, "Bacillati", "Bacillota", "Bacilli", "Bacillales", "Staphylococcaceae", "Staphylococcus", "Staphylococcus aureus"]], "truncated": false, "filtered_table_rows_count": 18, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA1174207", "p2": "Bacillota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1174207&tax_phylum=Bacillota", "results": [{"value": "PRJNA1174207", "label": "PRJNA1174207", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Bacillota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1174207&tax_phylum=Bacillota", "results": [{"value": "diamond", "label": "diamond", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1174207&tax_phylum=Bacillota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1174207&tax_phylum=Bacillota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1174207&tax_phylum=Bacillota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1174207&tax_phylum=Bacillota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1174207&tax_phylum=Bacillota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1174207&tax_phylum=Bacillota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1174207&tax_phylum=Bacillota", "results": [{"value": "Bacillota", "label": "Bacillota", "count": 18, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1174207", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 372.4337550011114}