{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA1164198\" and tax_phylum = \"Chordata\"", "rows": [[5415015, "PRJNA1164198_P_NODE_13465_length_337_cov_2.931818_g13196_i0", "PRJNA1164198", "13465", "337", "2.931818", "9.88022666", "Chordata", "7711", "Chordata", "Chordata", "84.7", "5.45e-18", "", "NR", "KAB0345139.1", "9888", "g13196", "i0", "53.8", "8.76854599406528", "93", "33", "73.9", "1", "8", "256", "31", "123", "KAB0345139.1 hypothetical protein FD754_022065 [Muntiacus muntjak]", "diamond", "2955", "85.5", "0.990643274853801", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Artiodactyla", "Cervidae", "Muntiacus", "Muntiacus muntjak"], [6689942, "PRJNA1164198_P_NODE_30426_length_243_cov_0.917647_g30157_i0", "PRJNA1164198", "30426", "243", "0.917647", "2.22988221", "Chordata", "7711", "Chordata", "Chordata", "148", "2.31e-40", "", "NR", "KAG2455313.1", "55291", "g30157", "i0", "81.5", "86", "81", "15", "100", "0", "1", "243", "182", "262", "KAG2455313.1 GBLP protein, partial [Polypterus senegalus]", "diamond", "20898", "149", "0.993288590604027", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Cladistia", "Polypteriformes", "Polypteridae", "Polypterus", "Polypterus senegalus"], [21988660, "PRJNA1164198_P_NODE_10478_length_384_cov_2.408360_g10210_i0", "PRJNA1164198", "10478", "384", "2.40836", "9.2481024", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "180", "4.3899999999999996e-54", "", "NR", "CAM2101742.1", "8467", "g10210", "i0", "68.8", "91.3828125", "125", "38", "96.9", "1", "11", "382", "65", "189", "CAM2101742.1 unnamed protein product [Caretta caretta]", "diamond", "35091", "180", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", null, "Testudines", "Cheloniidae", "Caretta", "Caretta caretta"], [21988755, "PRJNA1164198_P_NODE_7098_length_471_cov_2.472362_g6837_i0", "PRJNA1164198", "7098", "471", "2.472362", "11.64482502", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "192", "2.72e-59", "", "NR", "KAK9406484.1", "8729", "g6837", "i0", "66.4", "84.3566878980892", "146", "45", "91.1", "2", "20", "448", "38", "182", "KAK9406484.1 hypothetical protein NXF25_005258 [Crotalus adamanteus]", "diamond", "39732", "193", "0.994818652849741", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Lepidosauria", "Squamata", "Viperidae", "Crotalus", "Crotalus adamanteus"], [26977098, "PRJNA1164198_P_NODE_10042_length_392_cov_4.213166_g9775_i0", "PRJNA1164198", "10042", "392", "4.213166", "16.51561072", "Branchiostoma lanceolatum", "7740", "Chordata", "Chordata", "97.4", "3.919999999999999e-23", "", "NR", "XP_066285211.1", "7740", "g9775", "i0", "41.6", "0.956632653061224", "125", "71", "94.1", "1", "2", "370", "2", "126", "XP_066285211.1 profilin-1A-like [Branchiostoma lanceolatum]", "diamond", "375", "97.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Leptocardii", "Amphioxiformes", "Branchiostomatidae", "Branchiostoma", "Branchiostoma lanceolatum"], [26996238, "PRJNA1164198_P_NODE_13162_length_341_cov_1.746269_g12893_i0", "PRJNA1164198", "13162", "341", "1.746269", "5.95477729", "Metazoa", "33208", "Chordata", "Chordata", "82", "1.64e-17", "", "NR", "XP_005987634.1", "7897", "g12893", "i0", "50.6", "3.34310850439883", "77", "38", "67.7", "0", "329", "99", "1", "77", "XP_005987634.1 60S acidic ribosomal protein P2 [Latimeria chalumnae]", "diamond", "1140", "82", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", null, "Coelacanthiformes", "Coelacanthidae", "Latimeria", "Latimeria chalumnae"], [27470659, "PRJNA1164198_P_NODE_18063_length_291_cov_1.431193_g17794_i0", "PRJNA1164198", "18063", "291", "1.431193", "4.16477163", "Mammalia", "40674", "Chordata", "Chordata", "102", "7.02e-25", "", "NR", "XP_037679824.1", "27675", "g17794", "i0", "60.9", "14.0412371134021", "92", "35", "94.8", "1", "14", "289", "61", "151", "XP_037679824.1 40S ribosomal protein S15 [Choloepus didactylus]", "diamond", "4086", "102", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Pilosa", "Megalonychidae", "Choloepus", "Choloepus didactylus"], [27502307, "PRJNA1164198_P_NODE_22503_length_262_cov_1.142857_g22234_i0", "PRJNA1164198", "22503", "262", "1.142857", "2.99428534", "Chordata", "7711", "Chordata", "Chordata", "98.6", "7.99e-22", "", "NR", "XP_069478496.1", "8296", "g22234", "i0", "48.3", "12.9618320610687", "87", "45", "99.6", "0", "261", "1", "374", "460", "XP_069478496.1 adenylyl cyclase-associated protein 1 [Ambystoma mexicanum]", "diamond", "3396", "98.6", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Caudata", "Ambystomatidae", "Ambystoma", "Ambystoma mexicanum"], [28114185, "PRJNA1164198_P_NODE_21905_length_266_cov_0.808290_g21636_i0", "PRJNA1164198", "21905", "266", "0.80829", "2.1500514", "Buphagus erythrorhynchus", "245048", "Chordata", "Chordata", "46.6", "1.27e-4", "", "NR", "NXU06048.1", "245048", "g21636", "i0", "47.4", "2.18796992481203", "38", "20", "42.9", "0", "9", "122", "11", "48", "NXU06048.1 ZBT17 protein [Buphagus erythrorhynchus]", "diamond", "582", "46.6", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Passeriformes", "Sturnidae", "Buphagus", "Buphagus erythrorhynchus"], [28828066, "PRJNA1164198_P_NODE_2808_length_745_cov_2.127976_g2595_i0", "PRJNA1164198", "2808", "745", "2.127976", "15.8534212", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "271", "6.479999999999997e-88", "", "NR", "AAZ38987.1", "8668", "g2595", "i0", "56.6", "54.1731543624161", "244", "93", "97", "2", "737", "15", "2", "235", "AAZ38987.1 40S ribosomal protein S2, partial [Oxyuranus scutellatus]", "diamond", "40359", "273", "0.992673992673993", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Lepidosauria", "Squamata", "Elapidae", "Oxyuranus", "Oxyuranus scutellatus"], [28935331, "PRJNA1164198_P_NODE_27688_length_247_cov_0.896552_g27419_i0", "PRJNA1164198", "27688", "247", "0.896552", "2.21448344", "Hyperolius riggenbachi", "752182", "Chordata", "Chordata", "65.9", "2.78e-10", "", "NR", "XP_068115012.1", "752182", "g27419", "i0", "56.6", "1.28744939271255", "53", "23", "64.4", "0", "230", "72", "55", "107", "XP_068115012.1 guanylate cyclase 2G-like [Hyperolius riggenbachi]", "diamond", "318", "65.9", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Hyperoliidae", "Hyperolius", "Hyperolius riggenbachi"], [29049347, "PRJNA1164198_P_NODE_26508_length_249_cov_0.886364_g26239_i0", "PRJNA1164198", "26508", "249", "0.886364", "2.20704636", "Bufonidae", "8382", "Chordata", "Chordata", "89.7", "1.14e-18", "", "NR", "XP_044147138.1", "30331", "g26239", "i0", "51.9", "8.68674698795181", "81", "39", "97.6", "0", "3", "245", "215", "295", "XP_044147138.1 uncharacterized protein LOC122935434 [Bufo gargarizans]", "diamond", "2163", "90.1", "0.995560488346282", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Bufonidae", "Bufo", "Bufo gargarizans"], [29365068, "PRJNA1164198_P_NODE_26109_length_250_cov_0.881356_g25840_i0", "PRJNA1164198", "26109", "250", "0.881356", "2.20339", "root", "1", "Root_unresolved", "Root_unresolved", "55.1", "9.71e-7", "", "NR", "XP_070318000.1", "9874", "g25840", "i0", "57.4", "3.024", "54", "22", "63.6", "1", "248", "90", "44", "97", "XP_070318000.1 LINE-1 type transposase domain-containing protein 1 [Odocoileus virginianus]", "diamond", "756", "55.1", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Artiodactyla", "Cervidae", "Odocoileus", "Odocoileus virginianus"], [29471707, "PRJNA1164198_P_NODE_28490_length_246_cov_0.901734_g28221_i0", "PRJNA1164198", "28490", "246", "0.901734", "2.21826564", "Heterodontus francisci", "7792", "Chordata", "Chordata", "73.2", "7.08e-13", "", "NR", "XP_067908860.1", "7792", "g28221", "i0", "55.2", "0.707317073170732", "58", "26", "70.7", "0", "226", "53", "309", "366", "XP_067908860.1 ornithine decarboxylase-like [Heterodontus francisci]", "diamond", "174", "73.2", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Chondrichthyes", "Heterodontiformes", "Heterodontidae", "Heterodontus", "Heterodontus francisci"], [30040450, "PRJNA1164198_P_NODE_17291_length_297_cov_1.602679_g17022_i0", "PRJNA1164198", "17291", "297", "1.602679", "4.75995663", "Chinchilla lanigera", "34839", "Chordata", "Chordata", "43.5", "0.0366", "", "NR", "XP_013364948.1", "34839", "g17022", "i0", "60", "0.353535353535354", "35", "14", "35.4", "0", "184", "288", "350", "384", "XP_013364948.1 PREDICTED: LOW QUALITY PROTEIN: protein DEK [Chinchilla lanigera]", "diamond", "105", "43.5", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Chinchillidae", "Chinchilla", "Chinchilla lanigera"], [30609052, "PRJNA1164198_P_NODE_27093_length_248_cov_0.891429_g26824_i0", "PRJNA1164198", "27093", "248", "0.891429", "2.21074392", "Alligator mississippiensis", "8496", "Chordata", "Chordata", "45.4", "0.00449", "", "NR", "XP_059586823.1", "8496", "g26824", "i0", "58.3", "0.834677419354839", "36", "14", "42.3", "1", "3", "107", "59", "94", "XP_059586823.1 espin-like protein isoform X3 [Alligator mississippiensis]", "diamond", "207", "45.8", "0.991266375545852", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", null, "Crocodylia", "Alligatoridae", "Alligator", "Alligator mississippiensis"], [30767164, "PRJNA1164198_P_NODE_17234_length_298_cov_1.031111_g16965_i0", "PRJNA1164198", "17234", "298", "1.0311110000000001", "3.07271078", "Hyperolius riggenbachi", "752182", "Chordata", "Chordata", "58.9", "1.48e-7", "", "NR", "XP_068115012.1", "752182", "g16965", "i0", "51", "2.00335570469799", "51", "25", "51.3", "0", "158", "6", "57", "107", "XP_068115012.1 guanylate cyclase 2G-like [Hyperolius riggenbachi]", "diamond", "597", "58.9", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Hyperoliidae", "Hyperolius", "Hyperolius riggenbachi"], [30893693, "PRJNA1164198_P_NODE_19734_length_279_cov_1.184466_g19465_i0", "PRJNA1164198", "19734", "279", "1.184466", "3.30466014", "Eublepharis macularius", "481883", "Chordata", "Chordata", "62.8", "5.2e-9", "", "NR", "XP_054846670.1", "481883", "g19465", "i0", "39.4", "5.34408602150538", "71", "43", "76.3", "0", "3", "215", "83", "153", "XP_054846670.1 serine/threonine-protein kinase MRCK gamma isoform X4 [Eublepharis macularius]", "diamond", "1491", "62.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Lepidosauria", "Squamata", "Eublepharidae", "Eublepharis", "Eublepharis macularius"], [31196762, "PRJNA1164198_P_NODE_14315_length_327_cov_1.535433_g14046_i0", "PRJNA1164198", "14315", "327", "1.535433", "5.02086591", "Passeriformes", "9126", "Chordata", "Chordata", "106", "1.17e-26", "", "NR", "XP_016157899.1", "59894", "g14046", "i0", "59.1", "13.6422018348624", "93", "38", "85.3", "0", "324", "46", "57", "149", "XP_016157899.1 PREDICTED: 60S ribosomal protein L35 [Ficedula albicollis]", "diamond", "4461", "107", "0.990654205607477", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Passeriformes", "Muscicapidae", "Ficedula", "Ficedula albicollis"], [31557646, "PRJNA1164198_P_NODE_30696_length_242_cov_0.923077_g30427_i0", "PRJNA1164198", "30696", "242", "0.923077", "2.23384634", "Emys orbicularis", "82168", "Chordata", "Chordata", "45.4", "0.00427", "", "NR", "XP_065276831.1", "82168", "g30427", "i0", "60.6", "3.60743801652893", "33", "13", "40.9", "0", "105", "7", "822", "854", "XP_065276831.1 LOW QUALITY PROTEIN: uncharacterized protein LOC135892976, partial [Emys orbicularis]", "diamond", "873", "45.8", "0.991266375545852", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", null, "Testudines", "Emydidae", "Emys", "Emys orbicularis"], [31620628, "PRJNA1164198_P_NODE_21996_length_265_cov_1.447917_g21727_i0", "PRJNA1164198", "21996", "265", "1.447917", "3.83698005", "Mus musculus", "10090", "Chordata", "Chordata", "44.3", "0.012", "", "NR", "BAC28802.1", "10090", "g21727", "i0", "38.9", "0.815094339622642", "72", "42", "81.5", "1", "46", "261", "131", "200", "BAC28802.1 unnamed protein product, partial [Mus musculus]", "diamond", "216", "44.3", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Rodentia", "Muridae", "Mus", "Mus musculus"], [31841901, "PRJNA1164198_P_NODE_30317_length_243_cov_0.917647_g30048_i0", "PRJNA1164198", "30317", "243", "0.917647", "2.22988221", "Phacochoerus africanus", "41426", "Chordata", "Chordata", "45.8", "0.00278", "", "NR", "XP_047654103.1", "41426", "g30048", "i0", "55", "0.493827160493827", "40", "18", "49.4", "0", "167", "48", "175", "214", "XP_047654103.1 translation initiation factor IF-2-like [Phacochoerus africanus]", "diamond", "120", "45.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Mammalia", "Artiodactyla", "Suidae", "Phacochoerus", "Phacochoerus africanus"], [32051222, "PRJNA1164198_P_NODE_24998_length_252_cov_0.871508_g24729_i0", "PRJNA1164198", "24998", "252", "0.871508", "2.19620016", "Eukaryota", "2759", "unresolved_Eukaryota", "other_Eukaryota", "47.8", "7.18e-4", "", "NR", "NP_001072831.1", "8364", "g24729", "i0", "58.6", "2.27380952380952", "29", "12", "34.5", "0", "166", "252", "40", "68", "NP_001072831.1 adenine DNA glycosylase [Xenopus tropicalis]", "diamond", "573", "48.1", "0.993762993762994", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Pipidae", "Xenopus", "Xenopus tropicalis"], [32853117, "PRJNA1164198_P_NODE_29680_length_244_cov_0.912281_g29411_i0", "PRJNA1164198", "29680", "244", "0.912281", "2.22596564", "Rana temporaria", "8407", "Chordata", "Chordata", "45.1", "0.00569", "", "NR", "XP_040185054.1", "8407", "g29411", "i0", "30.5", "1.90573770491803", "82", "53", "95.9", "2", "240", "7", "106", "187", "XP_040185054.1 5-hydroxytryptamine receptor 3A-like [Rana temporaria]", "diamond", "465", "45.1", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Ranidae", "Rana", "Rana temporaria"]], "truncated": false, "filtered_table_rows_count": 24, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA1164198", "p2": "Chordata"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1164198&tax_phylum=Chordata", "results": [{"value": "PRJNA1164198", "label": "PRJNA1164198", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Chordata", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1164198&tax_phylum=Chordata", "results": [{"value": "diamond", "label": "diamond", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1164198&tax_phylum=Chordata", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1164198&tax_phylum=Chordata", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1164198&tax_phylum=Chordata&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1164198&tax_phylum=Chordata", "results": [{"value": "Opisthokonta", "label": "Opisthokonta", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1164198&tax_phylum=Chordata&tax_clade=Opisthokonta", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1164198&tax_phylum=Chordata", "results": [{"value": "Metazoa", "label": "Metazoa", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1164198&tax_phylum=Chordata&tax_kingdom=Metazoa", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1164198&tax_phylum=Chordata", "results": [{"value": "Chordata", "label": "Chordata", "count": 24, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1164198", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 406.16658100043423}