{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA1158727\" and tax_phylum = \"Nitrospirota\"", "rows": [[27261689, "PRJNA1158727_P_NODE_160363_length_242_cov_0.911243_g152901_i0", "PRJNA1158727", "160363", "242", "0.911243", "2.20520806", "Nitrospiraceae bacterium", "2026770", "Bacteria", "Bacteria", "163", "4.67e-47", "", "NR", "MBX9659041.1", "2026770", "g152901", "i0", "98.8", "1.98347107438017", "80", "1", "99.2", "0", "240", "1", "124", "203", "MBX9659041.1 DegT/DnrJ/EryC1/StrS family aminotransferase [Nitrospiraceae bacterium]", "diamond", "480", "163", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", null, "Nitrospiraceae bacterium"], [27388182, "PRJNA1158727_P_NODE_141843_length_249_cov_0.875000_g134381_i0", "PRJNA1158727", "141843", "249", "0.875", "2.17875", "Nitrospirota bacterium", "2026887", "Bacteria", "Bacteria", "53.1", "7.07e-6", "", "NR", "MBU6483083.1", "2026887", "g134381", "i0", "44.3", "3.32530120481928", "70", "38", "83.1", "1", "12", "218", "201", "270", "MBU6483083.1 glycosyltransferase [Nitrospirota bacterium]", "diamond", "828", "53.1", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", null, null, null, null, "Nitrospirota bacterium"], [27861486, "PRJNA1158727_P_NODE_114265_length_274_cov_1.532338_g106804_i0", "PRJNA1158727", "114265", "274", "1.532338", "4.19860612", "Nitrospira sp.", "70125", "Bacteria", "Bacteria", "99.4", "1.1799999999999999e-23", "", "NR", "MEQ1627049.1", "70125", "g106804", "i0", "100", "0.514598540145985", "47", "0", "51.5", "0", "133", "273", "1", "47", "MEQ1627049.1 hypothetical protein [Nitrospira sp.]", "diamond", "141", "99.4", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira sp."], [29439996, "PRJNA1158727_P_NODE_148010_length_246_cov_1.554913_g140548_i0", "PRJNA1158727", "148010", "246", "1.554913", "3.82508598", "Nitrospira sp.", "70125", "Bacteria", "Bacteria", "110", "3.39e-27", "", "NR", "MBH0192386.1", "70125", "g140548", "i0", "100", "0.682926829268293", "56", "0", "68.3", "0", "245", "78", "214", "269", "MBH0192386.1 hypothetical protein [Nitrospira sp.]", "diamond", "168", "110", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira sp."], [30040331, "PRJNA1158727_P_NODE_156651_length_243_cov_0.905882_g149189_i0", "PRJNA1158727", "156651", "243", "0.905882", "2.20129326", "Nitrospiraceae bacterium", "2026770", "Bacteria", "Bacteria", "87", "9.42e-18", "", "NR", "HAM52220.1", "2026770", "g149189", "i0", "55.1", "0.851851851851852", "69", "31", "85.2", "0", "35", "241", "450", "518", "HAM52220.1 hypothetical protein [Nitrospiraceae bacterium]", "diamond", "207", "87", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", null, "Nitrospiraceae bacterium"], [30198087, "PRJNA1158727_P_NODE_131632_length_254_cov_1.701657_g124171_i0", "PRJNA1158727", "131632", "254", "1.701657", "4.32220878", "Nitrospira defluvii", "330214", "Bacteria", "Bacteria", "74.3", "3.140000000000001e-13", "", "NR", "WP_213042236.1", "330214", "g124171", "i0", "100", "0.413385826771654", "35", "0", "41.3", "0", "253", "149", "479", "513", "WP_213042236.1 hypothetical protein [Nitrospira defluvii]", "diamond", "105", "74.3", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira defluvii"], [30470611, "PRJNA1158727_P_NODE_146713_length_247_cov_0.885057_g139251_i0", "PRJNA1158727", "146713", "247", "0.885057", "2.18609079", "Nitrospira", "1234", "Bacteria", "Bacteria", "163", "6.72e-47", "", "NR", "MBL8037992.1", "70125", "g139251", "i0", "93.8", "11.8056680161943", "81", "5", "98.4", "0", "3", "245", "160", "240", "MBL8037992.1 FIST C-terminal domain-containing protein [Nitrospira sp.]", "diamond", "2916", "163", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira sp."], [30881123, "PRJNA1158727_P_NODE_160414_length_242_cov_0.911243_g152952_i0", "PRJNA1158727", "160414", "242", "0.911243", "2.20520806", "Nitrospira", "1234", "Bacteria", "Bacteria", "146", "3.77e-41", "", "NR", "MBH0177984.1", "70125", "g152952", "i0", "93.8", "2.97520661157025", "80", "5", "99.2", "0", "241", "2", "83", "162", "MBH0177984.1 ABC transporter substrate-binding protein [Nitrospira sp.]", "diamond", "720", "147", "0.993197278911565", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira sp."], [30912961, "PRJNA1158727_P_NODE_163914_length_241_cov_0.916667_g156452_i0", "PRJNA1158727", "163914", "241", "0.916667", "2.20916747", "Pseudomonadati", "3379134", "Bacteria", "Bacteria", "60.8", "1.03e-9", "", "NR", "NGZ08543.1", "2039809", "g156452", "i0", "57.1", "1.50622406639004", "56", "20", "68.5", "2", "181", "17", "11", "63", "NGZ08543.1 hypothetical protein [Nitrospira sp. LK70]", "diamond", "363", "61.2", "0.993464052287582", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira sp. LK70"], [31019852, "PRJNA1158727_P_NODE_112875_length_276_cov_1.172414_g105414_i0", "PRJNA1158727", "112875", "276", "1.172414", "3.23586264", "Nitrospira sp.", "70125", "Bacteria", "Bacteria", "43.9", "0.0128", "", "NR", "HNG00894.1", "70125", "g105414", "i0", "32.2", "1.85869565217391", "90", "61", "97.8", "0", "3", "272", "81", "170", "HNG00894.1 hypothetical protein [Nitrospira sp.]", "diamond", "513", "43.9", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira sp."], [32379961, "PRJNA1158727_P_NODE_153159_length_244_cov_1.801170_g145697_i0", "PRJNA1158727", "153159", "244", "1.80117", "4.3948548", "Nitrospira sp.", "70125", "Bacteria", "Bacteria", "132", "1e-34", "", "NR", "MEI8016501.1", "70125", "g145697", "i0", "85", "0.983606557377049", "80", "12", "98.4", "0", "242", "3", "146", "225", "MEI8016501.1 ISL3 family transposase [Nitrospira sp.]", "diamond", "240", "132", "1", "Bacteria", null, "Pseudomonadati", "Nitrospirota", "Nitrospiria", "Nitrospirales", "Nitrospiraceae", "Nitrospira", "Nitrospira sp."]], "truncated": false, "filtered_table_rows_count": 11, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA1158727", "p2": "Nitrospirota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1158727&tax_phylum=Nitrospirota", "results": [{"value": "PRJNA1158727", "label": "PRJNA1158727", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Nitrospirota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1158727&tax_phylum=Nitrospirota", "results": [{"value": "diamond", "label": "diamond", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1158727&tax_phylum=Nitrospirota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1158727&tax_phylum=Nitrospirota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1158727&tax_phylum=Nitrospirota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1158727&tax_phylum=Nitrospirota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1158727&tax_phylum=Nitrospirota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1158727&tax_phylum=Nitrospirota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1158727&tax_phylum=Nitrospirota", "results": [{"value": "Nitrospirota", "label": "Nitrospirota", "count": 11, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1158727", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 228.7247339845635}