{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA1123309\" and tax_phylum = \"Chordata\"", "rows": [[4105207, "PRJNA1123309_P_NODE_21984_length_340_cov_1.250936_g21605_i0", "PRJNA1123309", "21984", "340", "1.250936", "4.2531824", "Phallusia mammillata", "59560", "Chordata", "Chordata", "152", "1.75e-41", "", "NR", "CAB3267494.1", "59560", "g21605", "i0", "66.1", "1.95882352941176", "112", "37", "98.8", "1", "3", "338", "86", "196", "CAB3267494.1 UDP-glucose 6-dehydrogenase [Phallusia mammillata]", "diamond", "666", "152", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Ascidiacea", "Phlebobranchia", "Ascidiidae", "Phallusia", "Phallusia mammillata"], [26975228, "PRJNA1123309_P_NODE_62222_length_244_cov_0.912281_g61842_i0", "PRJNA1123309", "62222", "244", "0.912281", "2.22596564", "Engystomops pustulosus", "76066", "Chordata", "Chordata", "86.3", "1.77e-17", "", "NR", "KAG8571490.1", "76066", "g61842", "i0", "55.4", "4.52459016393443", "74", "33", "91", "0", "12", "233", "957", "1030", "KAG8571490.1 hypothetical protein GDO81_011667 [Engystomops pustulosus]", "diamond", "1104", "87", "0.991954022988506", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Leptodactylidae", "Engystomops", "Engystomops pustulosus"], [27101730, "PRJNA1123309_P_NODE_36182_length_280_cov_1.270531_g35802_i0", "PRJNA1123309", "36182", "280", "1.270531", "3.5574868", "Phallusia mammillata", "59560", "Chordata", "Chordata", "77.4", "3.5e-15", "", "NR", "CAB3249045.1", "59560", "g35802", "i0", "41.9", "0.921428571428571", "86", "50", "92.1", "0", "264", "7", "23", "108", "CAB3249045.1 DNA replication complex GINS protein PSF1 [Phallusia mammillata]", "diamond", "258", "77.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Ascidiacea", "Phlebobranchia", "Ascidiidae", "Phallusia", "Phallusia mammillata"], [27659809, "PRJNA1123309_P_NODE_22024_length_340_cov_0.891386_g21645_i0", "PRJNA1123309", "22024", "340", "0.891386", "3.0307124", "Passeriformes", "9126", "Chordata", "Chordata", "71.2", "4.14e-13", "", "NR", "NXS23194.1", "98133", "g21645", "i0", "45.3", "1.51764705882353", "86", "38", "75.9", "2", "3", "260", "54", "130", "NXS23194.1 CALMS protein [Mystacornis crossleyi]", "diamond", "516", "71.2", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Passeriformes", "Timaliidae", "Mystacornis", "Mystacornis crossleyi"], [27975334, "PRJNA1123309_P_NODE_43905_length_261_cov_0.946809_g43525_i0", "PRJNA1123309", "43905", "261", "0.946809", "2.47117149", "Anura", "8342", "Chordata", "Chordata", "53.1", "9.67e-6", "", "NR", "XP_041429831.1", "8355", "g43525", "i0", "44.8", "3.14942528735632", "67", "37", "77", "0", "248", "48", "311", "377", "XP_041429831.1 uncharacterized protein LOC121397286 [Xenopus laevis]", "diamond", "822", "53.1", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Pipidae", "Xenopus", "Xenopus laevis"], [28417623, "PRJNA1123309_P_NODE_51846_length_250_cov_1.378531_g51466_i0", "PRJNA1123309", "51846", "250", "1.378531", "3.4463275", "Polypteridae", "8289", "Chordata", "Chordata", "55.8", "9.7e-7", "", "NR", "XP_051788734.1", "27687", "g51466", "i0", "69.4", "5.112", "36", "11", "43.2", "0", "129", "22", "157", "192", "XP_051788734.1 E3 SUMO-protein ligase ZBED1-like [Erpetoichthys calabaricus]", "diamond", "1278", "55.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Cladistia", "Polypteriformes", "Polypteridae", "Erpetoichthys", "Erpetoichthys calabaricus"], [28428293, "PRJNA1123309_P_NODE_50606_length_251_cov_0.876404_g50226_i0", "PRJNA1123309", "50606", "251", "0.876404", "2.19977404", "Staurois parvus", "386267", "Chordata", "Chordata", "61.6", "1.38e-10", "", "NR", "CAI9622145.1", "386267", "g50226", "i0", "74.4", "0.956175298804781", "39", "10", "46.6", "0", "250", "134", "7", "45", "CAI9622145.1 unnamed protein product [Staurois parvus]", "diamond", "240", "61.6", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Ranidae", "Staurois", "Staurois parvus"], [28480581, "PRJNA1123309_P_NODE_60966_length_245_cov_0.906977_g60586_i0", "PRJNA1123309", "60966", "245", "0.906977", "2.22209365", "root", "1", "Root_unresolved", "Root_unresolved", "88.6", "2.89e-19", "", "NR", "POI22351.1", "9083", "g60586", "i0", "60", "14.8285714285714", "80", "32", "98", "0", "2", "241", "136", "215", "POI22351.1 hypothetical protein CIB84_013902, partial [Bambusicola thoracicus]", "diamond", "3633", "88.6", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Galliformes", "Phasianidae", "Bambusicola", "Bambusicola thoracicus"], [28617813, "PRJNA1123309_P_NODE_55607_length_248_cov_0.891429_g55227_i0", "PRJNA1123309", "55607", "248", "0.891429", "2.21074392", "Regulus satrapa", "13245", "Chordata", "Chordata", "43.9", "0.00142", "", "NR", "NWR50751.1", "13245", "g55227", "i0", "47.1", "0.616935483870968", "51", "24", "61.7", "1", "17", "169", "6", "53", "NWR50751.1 ZNF85 protein [Regulus satrapa]", "diamond", "153", "43.9", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Aves", "Passeriformes", "Regulidae", "Regulus", "Regulus satrapa"], [29280547, "PRJNA1123309_P_NODE_34269_length_285_cov_0.971698_g33889_i0", "PRJNA1123309", "34269", "285", "0.971698", "2.7693393", "Callorhinchus milii", "7868", "Chordata", "Chordata", "76.6", "7.46e-14", "", "NR", "XP_042189895.1", "7868", "g33889", "i0", "43.9", "0.863157894736842", "82", "45", "86.3", "1", "280", "35", "747", "827", "XP_042189895.1 alpha-mannosidase 2 [Callorhinchus milii]", "diamond", "246", "76.6", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Chondrichthyes", "Chimaeriformes", "Callorhinchidae", "Callorhinchus", "Callorhinchus milii"], [29806554, "PRJNA1123309_P_NODE_26231_length_315_cov_1.243802_g25851_i0", "PRJNA1123309", "26231", "315", "1.243802", "3.9179763", "Ascidiacea", "7713", "Chordata", "Chordata", "107", "1.73e-24", "", "NR", "XP_002124785.3", "7719", "g25851", "i0", "49", "4.80952380952381", "100", "51", "95.2", "0", "311", "12", "193", "292", "XP_002124785.3 unconventional myosin-If [Ciona intestinalis]", "diamond", "1515", "107", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Ascidiacea", "Phlebobranchia", "Cionidae", "Ciona", "Ciona intestinalis"], [30891835, "PRJNA1123309_P_NODE_51974_length_250_cov_1.124294_g51594_i0", "PRJNA1123309", "51974", "250", "1.124294", "2.810735", "Myxine glutinosa", "7769", "Chordata", "Chordata", "63.2", "2.54e-9", "", "NR", "XP_067957627.1", "7769", "g51594", "i0", "60.4", "1.272", "53", "21", "63.6", "0", "14", "172", "291", "343", "XP_067957627.1 tryptophan--tRNA ligase, cytoplasmic isoform X2 [Myxine glutinosa]", "diamond", "318", "63.2", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Myxini", "Myxiniformes", "Myxinidae", "Myxine", "Myxine glutinosa"], [31702879, "PRJNA1123309_P_NODE_54657_length_249_cov_0.886364_g54277_i0", "PRJNA1123309", "54657", "249", "0.886364", "2.20704636", "Chordata", "7711", "Chordata", "Chordata", "63.5", "1.81e-9", "", "NR", "XP_053568518.1", "8345", "g54277", "i0", "58.1", "27.8915662650602", "62", "20", "73.5", "2", "244", "62", "152", "208", "XP_053568518.1 calpain-8-like isoform X2 [Bombina bombina]", "diamond", "6945", "63.9", "0.993740219092332", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Bombinatoridae", "Bombina", "Bombina bombina"], [31734311, "PRJNA1123309_P_NODE_44897_length_258_cov_1.491892_g44517_i0", "PRJNA1123309", "44897", "258", "1.491892", "3.84908136", "Metazoa", "33208", "Chordata", "Chordata", "54.7", "2.73e-6", "", "NR", "XP_065451455.1", "8478", "g44517", "i0", "45.5", "9.84883720930233", "77", "42", "89.5", "0", "1", "231", "75", "151", "XP_065451455.1 uncharacterized protein LOC135983429 [Chrysemys picta bellii]", "diamond", "2541", "54.7", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", null, "Testudines", "Emydidae", "Chrysemys", "Chrysemys picta"], [31840043, "PRJNA1123309_P_NODE_13677_length_414_cov_4.146628_g13300_i0", "PRJNA1123309", "13677", "414", "4.146628", "17.16703992", "Staurois parvus", "386267", "Chordata", "Chordata", "57.8", "1.2e-7", "", "NR", "CAI9533415.1", "386267", "g13300", "i0", "40", "3.00724637681159", "110", "47", "65.9", "4", "287", "15", "1", "110", "CAI9533415.1 unnamed protein product [Staurois parvus]", "diamond", "1245", "57.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Ranidae", "Staurois", "Staurois parvus"], [32061653, "PRJNA1123309_P_NODE_43538_length_262_cov_0.883598_g43158_i0", "PRJNA1123309", "43538", "262", "0.883598", "2.31502676", "Xenopus laevis", "8355", "Chordata", "Chordata", "48.5", "4.12e-4", "", "NR", "XP_041429831.1", "8355", "g43158", "i0", "39.5", "0.984732824427481", "86", "52", "98.5", "0", "3", "260", "342", "427", "XP_041429831.1 uncharacterized protein LOC121397286 [Xenopus laevis]", "diamond", "258", "48.5", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Pipidae", "Xenopus", "Xenopus laevis"], [32504863, "PRJNA1123309_P_NODE_47199_length_253_cov_0.866667_g46819_i0", "PRJNA1123309", "47199", "253", "0.866667", "2.19266751", "Staurois parvus", "386267", "Chordata", "Chordata", "50.8", "5.03e-6", "", "NR", "CAI9618608.1", "386267", "g46819", "i0", "48.5", "0.782608695652174", "66", "34", "78.3", "0", "21", "218", "19", "84", "CAI9618608.1 unnamed protein product [Staurois parvus]", "diamond", "198", "50.8", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Amphibia", "Anura", "Ranidae", "Staurois", "Staurois parvus"], [32746165, "PRJNA1123309_P_NODE_11400_length_450_cov_0.899204_g11024_i0", "PRJNA1123309", "11400", "450", "0.899204", "4.046418", "Chordata", "7711", "Chordata", "Chordata", "49.7", "0.00123", "", "NR", "KAF7250773.1", "61221", "g11024", "i0", "59.1", "2.36", "44", "18", "29.3", "0", "12", "143", "686", "729", "KAF7250773.1 M-phase phosphoprotein 8 [Varanus komodoensis]", "diamond", "1062", "49.7", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Lepidosauria", "Squamata", "Varanidae", "Varanus", "Varanus komodoensis"], [32788224, "PRJNA1123309_P_NODE_59780_length_246_cov_0.901734_g59400_i0", "PRJNA1123309", "59780", "246", "0.901734", "2.21826564", "Podarcis raffonei", "65483", "Chordata", "Chordata", "42.4", "0.0474", "", "NR", "XP_053220310.1", "65483", "g59400", "i0", "35.7", "0.682926829268293", "56", "36", "68.3", "0", "200", "33", "31", "86", "XP_053220310.1 5-demethoxyubiquinone hydroxylase, mitochondrial [Podarcis raffonei]", "diamond", "168", "42.4", "1", "Eukaryota", "Opisthokonta", "Metazoa", "Chordata", "Lepidosauria", "Squamata", "Lacertidae", "Podarcis", "Podarcis raffonei"]], "truncated": false, "filtered_table_rows_count": 19, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA1123309", "p2": "Chordata"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1123309&tax_phylum=Chordata", "results": [{"value": "PRJNA1123309", "label": "PRJNA1123309", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Chordata", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1123309&tax_phylum=Chordata", "results": [{"value": "diamond", "label": "diamond", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1123309&tax_phylum=Chordata", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1123309&tax_phylum=Chordata", "results": [{"value": "Eukaryota", "label": "Eukaryota", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1123309&tax_phylum=Chordata&tax_superkingdom=Eukaryota", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1123309&tax_phylum=Chordata", "results": [{"value": "Opisthokonta", "label": "Opisthokonta", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1123309&tax_phylum=Chordata&tax_clade=Opisthokonta", "selected": false}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1123309&tax_phylum=Chordata", "results": [{"value": "Metazoa", "label": "Metazoa", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1123309&tax_phylum=Chordata&tax_kingdom=Metazoa", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1123309&tax_phylum=Chordata", "results": [{"value": "Chordata", "label": "Chordata", "count": 19, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1123309", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 228.26337800142937}