{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA1120060\" and tax_clade = \"Methanomada group\"", "rows": [[26973690, "PRJNA1120060_P_NODE_1938382_length_275_cov_2.178218_g1920358_i0", "PRJNA1120060", "1938382", "275", "2.178218", "5.9900995", "Methanobrevibacter sp.", "66852", "Archaea", "Archaea", "48.1", "6.43e-4", "", "NR", "WP_292799713.1", "66852", "g1920358", "i0", "39.7", "0.741818181818182", "68", "34", "68.7", "2", "65", "253", "169", "234", "WP_292799713.1 class I SAM-dependent methyltransferase [Methanobrevibacter sp.]", "diamond", "204", "48.1", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [27449063, "PRJNA1120060_P_NODE_3410643_length_215_cov_4.830986_g3392523_i0", "PRJNA1120060", "3410643", "215", "4.830986", "10.3866199", "Methanobacterium", "2160", "Archaea", "Archaea", "146", "5.259999999999998e-42", "", "NR", "WP_069583365.1", "2160", "g3392523", "i0", "93", "2.97209302325581", "71", "5", "99.1", "0", "214", "2", "37", "107", "WP_069583365.1 MULTISPECIES: flavodoxin family protein [Methanobacterium]", "diamond", "639", "146", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", null], [27922023, "PRJNA1120060_P_NODE_2733025_length_247_cov_5.528736_g2714941_i0", "PRJNA1120060", "2733025", "247", "5.528736", "13.65597792", "Methanococcaceae archaeon", "2528253", "Archaea", "Archaea", "43.5", "0.0196", "", "NR", "HID47519.1", "2528253", "g2714941", "i0", "30.8", "1.78542510121457", "39", "27", "47.4", "0", "175", "59", "19", "57", "HID47519.1 radical SAM protein [Methanococcaceae archaeon]", "diamond", "441", "43.5", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanococci", "Methanococcales", "Methanococcaceae", null, "Methanococcaceae archaeon"], [28522074, "PRJNA1120060_P_NODE_2704587_length_248_cov_2.451429_g2686504_i0", "PRJNA1120060", "2704587", "248", "2.451429", "6.07954392", "Methanocaldococcus villosus", "667126", "Archaea", "Archaea", "44.7", "0.00828", "", "NR", "WP_017980999.1", "667126", "g2686504", "i0", "45.2", "1.01612903225806", "42", "20", "50.8", "1", "204", "79", "399", "437", "WP_017980999.1 cohesin domain-containing protein [Methanocaldococcus villosus]", "diamond", "252", "44.7", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanococci", "Methanococcales", "Methanocaldococcaceae", "Methanocaldococcus", "Methanocaldococcus villosus"], [28617020, "PRJNA1120060_P_NODE_2958387_length_242_cov_2.118343_g2940293_i0", "PRJNA1120060", "2958387", "242", "2.118343", "5.12639006", "Methanothermococcus okinawensis", "155863", "Archaea", "Archaea", "42.7", "0.0159", "", "NR", "WP_013866548.1", "155863", "g2940293", "i0", "33.3", "0.669421487603306", "54", "36", "66.9", "0", "233", "72", "67", "120", "WP_013866548.1 hypothetical protein [Methanothermococcus okinawensis]", "diamond", "162", "42.7", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanococci", "Methanococcales", "Methanococcaceae", "Methanothermococcus", "Methanothermococcus okinawensis"], [29374891, "PRJNA1120060_P_NODE_3450569_length_211_cov_5.405797_g3432444_i0", "PRJNA1120060", "3450569", "211", "5.405797", "11.40623167", "Methanobacterium sp.", "2164", "Archaea", "Archaea", "135", "5.41e-36", "", "NR", "MEN6292430.1", "2164", "g3432444", "i0", "97.1", "1.96208530805687", "69", "2", "98.1", "0", "210", "4", "127", "195", "MEN6292430.1 DUF5814 domain-containing protein [Methanobacterium sp.]", "diamond", "414", "135", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp."], [30132725, "PRJNA1120060_P_NODE_637732_length_342_cov_4.345725_g619967_i0", "PRJNA1120060", "637732", "342", "4.345725", "14.8623795", "Methanobacteriales archaeon HGW-Methanobacteriales-1", "2013815", "Archaea", "Archaea", "43.5", "0.0248", "", "NR", "PKL66576.1", "2013815", "g619967", "i0", "48.8", "0.37719298245614", "43", "18", "34.2", "1", "341", "225", "75", "117", "PKL66576.1 MAG: hypothetical protein CVV28_09230 [Methanobacteriales archaeon HGW-Methanobacteriales-1]", "diamond", "129", "43.5", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", null, null, "Methanobacteriales archaeon HGW-Methanobacteriales-1"], [30290621, "PRJNA1120060_P_NODE_2516112_length_253_cov_2.500000_g2498040_i0", "PRJNA1120060", "2516112", "253", "2.5", "6.325", "Methanobacterium sp.", "2164", "Archaea", "Archaea", "45.4", "0.00466", "", "NR", "MDO5836812.1", "2164", "g2498040", "i0", "36.5", "0.74703557312253", "63", "40", "74.7", "0", "34", "222", "47", "109", "MDO5836812.1 DUF460 domain-containing protein [Methanobacterium sp.]", "diamond", "189", "45.4", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp."], [30859305, "PRJNA1120060_P_NODE_3022574_length_239_cov_13.765060_g3004475_i0", "PRJNA1120060", "3022574", "239", "13.76506", "32.8984934", "Methanobacterium sp.", "2164", "Archaea", "Archaea", "94", "1.84e-22", "", "NR", "HML05427.1", "2164", "g3004475", "i0", "74.2", "0.778242677824268", "62", "16", "77.8", "0", "186", "1", "1", "62", "HML05427.1 hemerythrin domain-containing protein [Methanobacterium sp.]", "diamond", "186", "94", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", "Methanobacterium sp."], [31459223, "PRJNA1120060_P_NODE_1797996_length_281_cov_1.355769_g1779984_i0", "PRJNA1120060", "1797996", "281", "1.355769", "3.80971089", "Methanococcus maripaludis", "39152", "Archaea", "Archaea", "43.9", "0.0231", "", "NR", "WP_181505141.1", "39152", "g1779984", "i0", "28.9", "0.811387900355872", "76", "53", "80.1", "1", "247", "23", "311", "386", "WP_181505141.1 DEAD/DEAH box helicase [Methanococcus maripaludis]", "diamond", "228", "43.9", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanococci", "Methanococcales", "Methanococcaceae", "Methanococcus", "Methanococcus maripaludis"], [31586481, "PRJNA1120060_P_NODE_2772176_length_247_cov_0.781609_g2754092_i0", "PRJNA1120060", "2772176", "247", "0.781609", "1.93057423", "Methanobrevibacter sp.", "66852", "Archaea", "Archaea", "43.9", "0.0159", "", "NR", "MBR0371871.1", "66852", "g2754092", "i0", "41.7", "1.1417004048583", "48", "25", "54.7", "1", "148", "14", "968", "1015", "MBR0371871.1 Ig-like domain repeat protein [Methanobrevibacter sp.]", "diamond", "282", "43.9", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [31734125, "PRJNA1120060_P_NODE_2036977_length_271_cov_2.328283_g2018940_i0", "PRJNA1120060", "2036977", "271", "2.328283", "6.30964693", "Archaea", "2157", "Archaea", "Archaea", "126", "3.56e-32", "", "NR", "PKL67444.1", "2013815", "g2018940", "i0", "72.2", "3.46494464944649", "90", "25", "99.6", "0", "2", "271", "325", "414", "PKL67444.1 MAG: hypothetical protein CVV28_06180 [Methanobacteriales archaeon HGW-Methanobacteriales-1]", "diamond", "939", "126", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", null, null, "Methanobacteriales archaeon HGW-Methanobacteriales-1"], [31776307, "PRJNA1120060_P_NODE_330177_length_409_cov_1.470238_g312960_i0", "PRJNA1120060", "330177", "409", "1.470238", "6.01327342", "Methanobrevibacter sp.", "66852", "Archaea", "Archaea", "47", "0.00752", "", "NR", "WP_405316112.1", "66852", "g312960", "i0", "38.4", "0.535452322738386", "73", "34", "49.1", "3", "66", "266", "516", "583", "WP_405316112.1 hypothetical protein, partial [Methanobrevibacter sp.]", "diamond", "219", "47", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobrevibacter", "Methanobrevibacter sp."], [31807810, "PRJNA1120060_P_NODE_2961337_length_242_cov_1.810651_g2943243_i0", "PRJNA1120060", "2961337", "242", "1.810651", "4.38177542", "Methanobacterium", "2160", "Archaea", "Archaea", "157", "1.55e-44", "", "NR", "WP_069584556.1", "2160", "g2943243", "i0", "92.5", "0.991735537190083", "80", "6", "99.2", "0", "2", "241", "128", "207", "WP_069584556.1 MULTISPECIES: DUF1972 domain-containing protein [Methanobacterium]", "diamond", "240", "157", "1", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", null], [31955664, "PRJNA1120060_P_NODE_2595157_length_251_cov_1.471910_g2577080_i0", "PRJNA1120060", "2595157", "251", "1.47191", "3.6944941", "Methanobacterium", "2160", "Archaea", "Archaea", "158", "7.48e-43", "", "NR", "WP_069581922.1", "2160", "g2577080", "i0", "89.2", "2.97609561752988", "83", "9", "99.2", "0", "2", "250", "123", "205", "WP_069581922.1 MULTISPECIES: DUF3656 domain-containing U32 family peptidase [Methanobacterium]", "diamond", "747", "159", "0.993710691823899", "Archaea", "Methanomada group", "Methanobacteriati", "Methanobacteriota", "Methanobacteria", "Methanobacteriales", "Methanobacteriaceae", "Methanobacterium", null]], "truncated": false, "filtered_table_rows_count": 15, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_clade\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA1120060", "p2": "Methanomada group"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1120060&tax_clade=Methanomada+group", "results": [{"value": "PRJNA1120060", "label": "PRJNA1120060", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_clade=Methanomada+group", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1120060&tax_clade=Methanomada+group", "results": [{"value": "diamond", "label": "diamond", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1120060&tax_clade=Methanomada+group", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1120060&tax_clade=Methanomada+group", "results": [{"value": "Archaea", "label": "Archaea", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1120060&tax_clade=Methanomada+group&tax_superkingdom=Archaea", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1120060&tax_clade=Methanomada+group", "results": [{"value": "Methanomada group", "label": "Methanomada group", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1120060", "selected": true}], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1120060&tax_clade=Methanomada+group", "results": [{"value": "Methanobacteriati", "label": "Methanobacteriati", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1120060&tax_clade=Methanomada+group&tax_kingdom=Methanobacteriati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1120060&tax_clade=Methanomada+group", "results": [{"value": "Methanobacteriota", "label": "Methanobacteriota", "count": 15, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1120060&tax_clade=Methanomada+group&tax_phylum=Methanobacteriota", "selected": false}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 213.41045599547215}