{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA1103784\" and tax_phylum = \"Actinomycetota\"", "rows": [[7397982, "PRJNA1103784_P_NODE_7706_length_241_cov_1.785714_g7651_i0", "PRJNA1103784", "7706", "241", "1.785714", "4.30357074", "Arthrobacter russicus", "172040", "Bacteria", "Bacteria", "156", "1.4e-43", "", "NR", "WP_309797000.1", "172040", "g7651", "i0", "97.5", "0.983402489626556", "79", "2", "98.3", "0", "3", "239", "302", "380", "WP_309797000.1 mycothione reductase [Arthrobacter russicus]", "diamond", "237", "156", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Micrococcaceae", "Arthrobacter", "Arthrobacter russicus"], [27352404, "PRJNA1103784_P_NODE_6243_length_248_cov_0.880000_g6188_i0", "PRJNA1103784", "6243", "248", "0.88", "2.1824", "Microbacterium sp. LCT-H2", "1914306", "Bacteria", "Bacteria", "156", "3.69e-45", "", "NR", "WP_071330048.1", "1914306", "g6188", "i0", "85.4", "0.991935483870968", "82", "12", "99.2", "0", "1", "246", "9", "90", "WP_071330048.1 endonuclease/exonuclease/phosphatase family protein [Microbacterium sp. LCT-H2]", "diamond", "246", "156", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Microbacteriaceae", "Microbacterium", "Microbacterium sp. LCT-H2"], [28078314, "PRJNA1103784_P_NODE_7625_length_242_cov_0.911243_g7570_i0", "PRJNA1103784", "7625", "242", "0.911243", "2.20520806", "Prescottella equi", "43767", "Bacteria", "Bacteria", "140", "3.39e-38", "", "NR", "NKS38102.1", "43767", "g7570", "i0", "82.5", "1.98347107438017", "80", "14", "99.2", "0", "2", "241", "235", "314", "NKS38102.1 hypothetical protein [Prescottella equi]", "diamond", "480", "140", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Nocardiaceae", "Prescottella", "Prescottella equi"], [28425834, "PRJNA1103784_P_NODE_4686_length_268_cov_1.548718_g4631_i0", "PRJNA1103784", "4686", "268", "1.548718", "4.15056424", "Corynebacterium suicordis", "203264", "Bacteria", "Bacteria", "109", "1.5999999999999998e-25", "", "NR", "WP_194556289.1", "203264", "g4631", "i0", "100", "0.559701492537313", "50", "0", "56", "0", "1", "150", "518", "567", "WP_194556289.1 DEAD/DEAH box helicase [Corynebacterium suicordis]", "diamond", "150", "109", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Corynebacteriaceae", "Corynebacterium", "Corynebacterium suicordis"], [29174979, "PRJNA1103784_P_NODE_7549_length_242_cov_0.911243_g7494_i0", "PRJNA1103784", "7549", "242", "0.911243", "2.20520806", "Bacteria", "2", "Bacteria", "Bacteria", "141", "5.85e-42", "", "NR", "MCT6839605.1", "2478472", "g7494", "i0", "98.7", "1.97107438016529", "79", "1", "97.9", "0", "2", "238", "9", "87", "MCT6839605.1 cation:dicarboxylase symporter family transporter [Bifidobacteriales bacterium]", "diamond", "477", "141", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Bifidobacteriales", null, null, "Bifidobacteriales bacterium"], [29427136, "PRJNA1103784_P_NODE_6349_length_248_cov_0.880000_g6294_i0", "PRJNA1103784", "6349", "248", "0.88", "2.1824", "Rhodococcus", "1827", "Bacteria", "Bacteria", "58.2", "1.47e-7", "", "NR", "WP_301850652.1", "103816", "g6294", "i0", "39.5", "2.98790322580645", "81", "48", "98", "1", "245", "3", "587", "666", "WP_301850652.1 ATP-binding protein [Rhodococcus pyridinivorans]", "diamond", "741", "58.5", "0.994871794871795", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Nocardiaceae", "Rhodococcus", "Rhodococcus pyridinivorans"], [29616501, "PRJNA1103784_P_NODE_7810_length_241_cov_0.916667_g7755_i0", "PRJNA1103784", "7810", "241", "0.916667", "2.20916747", "root", "1", "Root_unresolved", "Root_unresolved", "53.5", "5.61e-6", "", "NR", "MBI2691692.1", "1909295", "g7755", "i0", "42.4", "1.56846473029046", "59", "34", "73.4", "0", "43", "219", "301", "359", "MBI2691692.1 cytochrome P450 [Solirubrobacterales bacterium]", "diamond", "378", "53.9", "0.992578849721707", "Bacteria", null, "Bacillati", "Actinomycetota", "Thermoleophilia", "Solirubrobacterales", null, null, "Solirubrobacterales bacterium"], [30185272, "PRJNA1103784_P_NODE_5532_length_252_cov_2.106145_g5477_i0", "PRJNA1103784", "5532", "252", "2.106145", "5.3074854", "Rhodococcus", "1827", "Bacteria", "Bacteria", "169", "2.9799999999999998e-52", "", "NR", "MCW0191935.1", "1831", "g5477", "i0", "100", "3.95238095238095", "83", "0", "98.8", "0", "2", "250", "31", "113", "MCW0191935.1 hypothetical protein [Rhodococcus sp. (in: high G+C Gram-positive bacteria)]", "diamond", "996", "169", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Nocardiaceae", "Rhodococcus", "Rhodococcus sp. (in: high G+C Gram-positive bacteria)"], [30257605, "PRJNA1103784_P_NODE_7512_length_242_cov_1.337278_g7457_i0", "PRJNA1103784", "7512", "242", "1.337278", "3.23621276", "Arthrobacter russicus", "172040", "Bacteria", "Bacteria", "129", "2.39e-34", "", "NR", "WP_296363163.1", "172040", "g7457", "i0", "100", "0.818181818181818", "66", "0", "81.8", "0", "44", "241", "1", "66", "WP_296363163.1 carbohydrate ABC transporter permease [Arthrobacter russicus]", "diamond", "198", "129", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Micrococcaceae", "Arthrobacter", "Arthrobacter russicus"], [31363433, "PRJNA1103784_P_NODE_7776_length_241_cov_0.916667_g7721_i0", "PRJNA1103784", "7776", "241", "0.916667", "2.20916747", "Lawsonella sp.", "2041415", "Bacteria", "Bacteria", "62", "5.68e-9", "", "NR", "WP_320616745.1", "2041415", "g7721", "i0", "100", "0.37344398340249", "30", "0", "37.3", "0", "150", "239", "214", "243", "WP_320616745.1 transcription termination factor Rho [Lawsonella sp.]", "diamond", "90", "62", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Lawsonellaceae", "Lawsonella", "Lawsonella sp."], [32059147, "PRJNA1103784_P_NODE_5438_length_254_cov_1.618785_g5383_i0", "PRJNA1103784", "5438", "254", "1.618785", "4.1117139", "Lawsonella clevelandensis", "1528099", "Bacteria", "Bacteria", "175", "2.7499999999999993e-52", "", "NR", "WP_373567037.1", "1528099", "g5383", "i0", "100", "0.992125984251969", "84", "0", "99.2", "0", "254", "3", "183", "266", "WP_373567037.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Lawsonella clevelandensis]", "diamond", "252", "175", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Mycobacteriales", "Lawsonellaceae", "Lawsonella", "Lawsonella clevelandensis"], [32154151, "PRJNA1103784_P_NODE_5198_length_259_cov_1.365591_g5143_i0", "PRJNA1103784", "5198", "259", "1.365591", "3.53688069", "Renibacterium sp.", "1914289", "Bacteria", "Bacteria", "179", "2.58e-56", "", "NR", "MBQ1445421.1", "1914289", "g5143", "i0", "96.5", "0.996138996138996", "86", "3", "99.6", "0", "1", "258", "29", "114", "MBQ1445421.1 hypothetical protein [Renibacterium sp.]", "diamond", "258", "179", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Micrococcaceae", "Renibacterium", "Renibacterium sp."], [32185853, "PRJNA1103784_P_NODE_7258_length_243_cov_1.758824_g7203_i0", "PRJNA1103784", "7258", "243", "1.758824", "4.27394232", "Luteipulveratus mongoliensis", "571913", "Bacteria", "Bacteria", "61.6", "3.12e-9", "", "NR", "WP_169787611.1", "571913", "g7203", "i0", "46.8", "0.950617283950617", "77", "39", "95.1", "2", "6", "236", "140", "214", "WP_169787611.1 TetR/AcrR family transcriptional regulator [Luteipulveratus mongoliensis]", "diamond", "231", "61.6", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Micrococcales", "Dermacoccaceae", "Luteipulveratus", "Luteipulveratus mongoliensis"], [32650952, "PRJNA1103784_P_NODE_1000_length_495_cov_2.196682_g945_i0", "PRJNA1103784", "1000", "495", "2.196682", "10.8735759", "Actinomycetota", "201174", "Bacteria", "Bacteria", "103", "2.78e-24", "", "NR", "HEY7821804.1", "2080302", "g945", "i0", "50.5", "1.88484848484848", "101", "46", "61.2", "1", "319", "17", "6", "102", "HEY7821804.1 peptidoglycan-binding domain-containing protein [Acidimicrobiia bacterium]", "diamond", "933", "103", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Acidimicrobiia", null, null, null, "Acidimicrobiia bacterium"], [32691280, "PRJNA1103784_P_NODE_2720_length_328_cov_1.007843_g2665_i0", "PRJNA1103784", "2720", "328", "1.007843", "3.30572504", "Streptomyces olivoreticuli", "68246", "Bacteria", "Bacteria", "45.1", "0.0142", "", "NR", "WP_116209566.1", "68246", "g2665", "i0", "36.5", "0.576219512195122", "63", "40", "57.6", "0", "191", "3", "227", "289", "WP_116209566.1 cytochrome P450 [Streptomyces olivoreticuli]", "diamond", "189", "45.1", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Kitasatosporales", "Streptomycetaceae", "Streptomyces", "Streptomyces olivoreticuli"], [32817326, "PRJNA1103784_P_NODE_4040_length_281_cov_2.649038_g3985_i0", "PRJNA1103784", "4040", "281", "2.649038", "7.44379678", "Nakamurella sp.", "1869182", "Bacteria", "Bacteria", "42.7", "0.0485", "", "NR", "MEO5834577.1", "1869182", "g3985", "i0", "37.2", "0.918149466192171", "86", "39", "86.5", "2", "267", "25", "11", "86", "MEO5834577.1 LysM peptidoglycan-binding domain-containing protein [Nakamurella sp.]", "diamond", "258", "42.7", "1", "Bacteria", null, "Bacillati", "Actinomycetota", "Actinomycetes", "Nakamurellales", "Nakamurellaceae", "Nakamurella", "Nakamurella sp."]], "truncated": false, "filtered_table_rows_count": 16, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA1103784", "p2": "Actinomycetota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1103784&tax_phylum=Actinomycetota", "results": [{"value": "PRJNA1103784", "label": "PRJNA1103784", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1103784&tax_phylum=Actinomycetota", "results": [{"value": "diamond", "label": "diamond", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1103784&tax_phylum=Actinomycetota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1103784&tax_phylum=Actinomycetota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1103784&tax_phylum=Actinomycetota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1103784&tax_phylum=Actinomycetota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1103784&tax_phylum=Actinomycetota", "results": [{"value": "Bacillati", "label": "Bacillati", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1103784&tax_phylum=Actinomycetota&tax_kingdom=Bacillati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1103784&tax_phylum=Actinomycetota", "results": [{"value": "Actinomycetota", "label": "Actinomycetota", "count": 16, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1103784", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 301.57014200813137}