{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA1072736\" and tax_phylum = \"Pseudomonadota\"", "rows": [[27288606, "PRJNA1072736_S_NODE_1983_length_244_cov_2.338308_g1978_i0", "PRJNA1072736", "1983", "244", "2.338308", "5.70547152", "Pseudomonas syringae group genomosp. 7", "251699", "Bacteria", "Bacteria", "45.1", "0.00434", "", "NR", "WP_395587210.1", "251699", "g1978", "i0", "40", "0.983606557377049", "80", "42", "92.2", "4", "229", "5", "126", "204", "WP_395587210.1 hypothetical protein, partial [Pseudomonas syringae group genomosp. 7]", "diamond", "240", "45.1", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Pseudomonadales", "Pseudomonadaceae", "Pseudomonas", "Pseudomonas syringae group genomosp. 7"], [27731081, "PRJNA1072736_S_NODE_2244_length_233_cov_2.878947_g2239_i0", "PRJNA1072736", "2244", "233", "2.878947", "6.70794651", "Shigella sonnei", "624", "Bacteria", "Bacteria", "82.8", "9.47e-19", "", "NR", "WP_353763804.1", "624", "g2239", "i0", "95.5", "0.566523605150215", "44", "2", "56.7", "0", "102", "233", "38", "81", "WP_353763804.1 hypothetical protein, partial [Shigella sonnei]", "diamond", "132", "82.8", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Shigella", "Shigella sonnei"], [27754101, "PRJNA1072736_S_NODE_2964_length_211_cov_3.017857_g2959_i0", "PRJNA1072736", "2964", "211", "3.017857", "6.36767827", "root", "1", "Root_unresolved", "Root_unresolved", "42.4", "0.00431", "", "NR", "WP_217900948.1", "573", "g2959", "i0", "54.8", "0.881516587677725", "31", "13", "42.7", "1", "2", "91", "3", "33", "WP_217900948.1 hypothetical protein, partial [Klebsiella pneumoniae]", "diamond", "186", "42.4", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", "Enterobacterales", "Enterobacteriaceae", "Klebsiella", "Klebsiella pneumoniae"], [32312335, "PRJNA1072736_S_NODE_1559_length_264_cov_1.647059_g1554_i0", "PRJNA1072736", "1559", "264", "1.647059", "4.34823576", "Gammaproteobacteria bacterium", "1913989", "Bacteria", "Bacteria", "112", "1.8e-27", "", "NR", "RLA04755.1", "1913989", "g1554", "i0", "68.6", "1.95454545454545", "86", "27", "97.7", "0", "260", "3", "77", "162", "RLA04755.1 MAG: hypothetical protein DRQ45_00060 [Gammaproteobacteria bacterium]", "diamond", "516", "112", "1", "Bacteria", null, "Pseudomonadati", "Pseudomonadota", "Gammaproteobacteria", null, null, null, "Gammaproteobacteria bacterium"]], "truncated": false, "filtered_table_rows_count": 4, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA1072736", "p2": "Pseudomonadota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1072736&tax_phylum=Pseudomonadota", "results": [{"value": "PRJNA1072736", "label": "PRJNA1072736", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Pseudomonadota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1072736&tax_phylum=Pseudomonadota", "results": [{"value": "diamond", "label": "diamond", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1072736&tax_phylum=Pseudomonadota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1072736&tax_phylum=Pseudomonadota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1072736&tax_phylum=Pseudomonadota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1072736&tax_phylum=Pseudomonadota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1072736&tax_phylum=Pseudomonadota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1072736&tax_phylum=Pseudomonadota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1072736&tax_phylum=Pseudomonadota", "results": [{"value": "Pseudomonadota", "label": "Pseudomonadota", "count": 4, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1072736", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 175.64556100114714}