{"database": "metadata", "table": "contig_metadata", "is_view": false, "human_description_en": "where analysis = \"diamond\", bioproject = \"PRJNA1069776\" and tax_phylum = \"Campylobacterota\"", "rows": [[23137389, "PRJNA1069776_S_NODE_55639_length_150_cov_1.757009_g55325_i0", "PRJNA1069776", "55639", "150", "1.757009", "2.6355135", "Sulfurospirillum sp.", "2053622", "Bacteria", "Bacteria", "98.2", "2.12e-24", "", "NR", "MBP9566668.1", "2053622", "g55325", "i0", "90", "3", "50", "5", "100", "0", "1", "150", "3", "52", "MBP9566668.1 dCTP deaminase [Sulfurospirillum sp.]", "diamond", "450", "98.2", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Sulfurospirillaceae", "Sulfurospirillum", "Sulfurospirillum sp."], [26624118, "PRJNA1069776_S_NODE_13961_length_272_cov_4.519651_g13647_i0", "PRJNA1069776", "13961", "272", "4.519651", "12.29345072", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "42.7", "0.00555", "", "NR", 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"diamond", "150", "81.6", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32438799, "PRJNA1069776_S_NODE_5859_length_358_cov_8.057143_g5545_i0", "PRJNA1069776", "5859", "358", "8.057143", "28.84457194", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "108", "8.78e-28", "", "NR", "WP_322538256.1", "210", "g5545", "i0", "65", "0.670391061452514", "80", "28", "67", "0", "358", "119", "28", "107", "WP_322538256.1 hypothetical protein, partial [Helicobacter pylori]", "diamond", "240", "108", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32816975, "PRJNA1069776_S_NODE_4100_length_394_cov_12.635328_g3786_i0", "PRJNA1069776", "4100", "394", "12.635328", "49.78319232", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "60.5", "6.03e-9", "", "NR", "GAA8950681.1", "210", "g3786", "i0", "54.1", "1.90355329949239", "61", "24", "43.4", "3", "228", "58", "42", "102", "GAA8950681.1 hypothetical protein Kyoto181A_1580 [Helicobacter pylori]", "diamond", "750", "60.5", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"], [32848454, "PRJNA1069776_S_NODE_7580_length_334_cov_7.092784_g7266_i0", "PRJNA1069776", "7580", "334", "7.092784", "23.68989856", "Helicobacter pylori", "210", "Bacteria", "Bacteria", "59.3", "2.6e-9", "", "NR", "GAA8714325.1", "210", "g7266", "i0", "58.1", "0.38622754491018", "43", "18", "38.6", "0", "118", "246", "1", "43", "GAA8714325.1 hypothetical protein Kyoto145A_4230 [Helicobacter pylori]", "diamond", "129", "59.3", "1", "Bacteria", null, "Pseudomonadati", "Campylobacterota", "Epsilonproteobacteria", "Campylobacterales", "Helicobacteraceae", "Helicobacter", "Helicobacter pylori"]], "truncated": false, "filtered_table_rows_count": 23, "expanded_columns": [], "expandable_columns": [], "columns": ["rowid", "query", "bioproject", "node", "length", "coverage", "rel_abundance", "taxname_lca", "taxid_lca", "taxoncategory", "taxoncategorysimple", "bits", "evalue", "lowcoverage_flag", "analysis_used", "target", "taxid", "gene", "allele", "pident", "sumperc_cov", "alnlen", "mismatch", "qcov", "gapopen", "qstart", "qend", "tstart", "tend", "target_title", "analysis", "sumalnlen", "maxbits", "bits_percmax", "tax_superkingdom", "tax_clade", "tax_kingdom", "tax_phylum", "tax_class", "tax_order", "tax_family", "tax_genus", "tax_species"], "primary_keys": [], "units": {}, "query": {"sql": "select rowid, [query], bioproject, node, length, coverage, rel_abundance, taxname_lca, taxid_lca, taxoncategory, taxoncategorysimple, bits, evalue, lowcoverage_flag, analysis_used, target, taxid, gene, allele, pident, sumperc_cov, alnlen, mismatch, qcov, gapopen, qstart, qend, tstart, tend, target_title, analysis, sumalnlen, maxbits, bits_percmax, tax_superkingdom, tax_clade, tax_kingdom, tax_phylum, tax_class, tax_order, tax_family, tax_genus, tax_species from contig_metadata where \"analysis\" = :p0 and \"bioproject\" = :p1 and \"tax_phylum\" = :p2 order by rowid limit 101", "params": {"p0": "diamond", "p1": "PRJNA1069776", "p2": "Campylobacterota"}}, "facet_results": {"bioproject": {"name": "bioproject", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1069776&tax_phylum=Campylobacterota", "results": [{"value": "PRJNA1069776", "label": "PRJNA1069776", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "analysis": {"name": "analysis", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1069776&tax_phylum=Campylobacterota", "results": [{"value": "diamond", "label": "diamond", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?bioproject=PRJNA1069776&tax_phylum=Campylobacterota", "selected": true}], "truncated": false}, "tax_superkingdom": {"name": "tax_superkingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1069776&tax_phylum=Campylobacterota", "results": [{"value": "Bacteria", "label": "Bacteria", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1069776&tax_phylum=Campylobacterota&tax_superkingdom=Bacteria", "selected": false}], "truncated": false}, "tax_clade": {"name": "tax_clade", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1069776&tax_phylum=Campylobacterota", "results": [], "truncated": false}, "tax_kingdom": {"name": "tax_kingdom", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1069776&tax_phylum=Campylobacterota", "results": [{"value": "Pseudomonadati", "label": "Pseudomonadati", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1069776&tax_phylum=Campylobacterota&tax_kingdom=Pseudomonadati", "selected": false}], "truncated": false}, "tax_phylum": {"name": "tax_phylum", "type": "column", "hideable": false, "toggle_url": "/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1069776&tax_phylum=Campylobacterota", "results": [{"value": "Campylobacterota", "label": "Campylobacterota", "count": 23, "toggle_url": "http://metadata.rnaquarium.org/metadata/contig_metadata.json?analysis=diamond&bioproject=PRJNA1069776", "selected": true}], "truncated": false}}, "suggested_facets": [], "next": null, "next_url": null, "private": false, "allow_execute_sql": true, "query_ms": 227.6805500005139}